RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 PROSER2Q86WR7 435 aaPredicted RBP19.42■□□□□ 0.7
ZNF548-212ENST00000602086 RGPD8O14715 1765 aaPredicted RBP19.42■□□□□ 0.7
ZNF548-212ENST00000602086 PNISRQ8TF01 805 aaKnown RBP19.41■□□□□ 0.7
ZNF548-212ENST00000602086 FYB1O15117 783 aa19.4■□□□□ 0.7
ZNF548-212ENST00000602086 MORC1Q86VD1 984 aa19.4■□□□□ 0.7
ZNF548-212ENST00000602086 CENPBP07199 599 aaPredicted RBP19.39■□□□□ 0.69
ZNF548-212ENST00000602086 CNGB1Q14028 1251 aaPredicted RBP19.39■□□□□ 0.69
ZNF548-212ENST00000602086 C19orf44Q9H6X5 657 aa19.39■□□□□ 0.69
ZNF548-212ENST00000602086 ACEP12821 1306 aa19.39■□□□□ 0.69
ZNF548-212ENST00000602086 USP6P35125 1406 aa19.39■□□□□ 0.69
ZNF548-212ENST00000602086 SSH2Q76I76 1423 aa19.39■□□□□ 0.69
ZNF548-212ENST00000602086 POTEAQ6S8J7 498 aa19.36■□□□□ 0.69
ZNF548-212ENST00000602086 YTHDC1Q96MU7 727 aaKnown RBP19.36■□□□□ 0.69
ZNF548-212ENST00000602086 TTC21AQ8NDW8 1320 aa19.35■□□□□ 0.69
ZNF548-212ENST00000602086 C14orf37Q86TY3 774 aa19.34■□□□□ 0.69
ZNF548-212ENST00000602086 MSH6P52701 1360 aa19.33■□□□□ 0.69
ZNF548-212ENST00000602086 COL16A1Q07092 1604 aaPredicted RBP19.33■□□□□ 0.69
ZNF548-212ENST00000602086 TTC21BQ7Z4L5 1316 aa19.33■□□□□ 0.69
ZNF548-212ENST00000602086 KIF1AQ12756 1690 aa19.33■□□□□ 0.68
ZNF548-212ENST00000602086 FAM9BQ8IZU0 186 aa19.32■□□□□ 0.68
ZNF548-212ENST00000602086 PHF8Q9UPP1 1060 aa19.32■□□□□ 0.68
ZNF548-212ENST00000602086 USP54Q70EL1 1684 aa19.32■□□□□ 0.68
ZNF548-212ENST00000602086 NUTM2FA1L443 756 aa19.31■□□□□ 0.68
ZNF548-212ENST00000602086 NGDNQ8NEJ9 315 aaKnown RBP19.31■□□□□ 0.68
ZNF548-212ENST00000602086 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
ZNF548-212ENST00000602086 AATKQ6ZMQ8 1374 aa19.31■□□□□ 0.68
ZNF548-212ENST00000602086 USP31Q70CQ4 1352 aa19.3■□□□□ 0.68
ZNF548-212ENST00000602086 C1orf167Q5SNV9 1468 aa19.29■□□□□ 0.68
ZNF548-212ENST00000602086 CADPS2Q86UW7 1296 aa19.29■□□□□ 0.68
ZNF548-212ENST00000602086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.29■□□□□ 0.68
ZNF548-212ENST00000602086 OVOS2A0A0J9YW53 1432 aa19.28■□□□□ 0.68
ZNF548-212ENST00000602086 MST1RQ04912 1400 aa19.28■□□□□ 0.68
ZNF548-212ENST00000602086 OVOS2Q6IE36 1432 aa19.28■□□□□ 0.68
ZNF548-212ENST00000602086 PMFBP1Q8TBY8 1022 aa19.28■□□□□ 0.68
ZNF548-212ENST00000602086 LRP6O75581 1613 aa19.27■□□□□ 0.68
ZNF548-212ENST00000602086 ATF3P18847 181 aa19.27■□□□□ 0.68
ZNF548-212ENST00000602086 NME9Q86XW9 330 aa19.27■□□□□ 0.68
ZNF548-212ENST00000602086 COG3Q96JB2 828 aa19.27■□□□□ 0.68
ZNF548-212ENST00000602086 SMG6Q86US8 1419 aaKnown RBP19.26■□□□□ 0.67
ZNF548-212ENST00000602086 CFAP53Q96M91 514 aa19.26■□□□□ 0.67
ZNF548-212ENST00000602086 BLMP54132 1417 aaPredicted RBP19.25■□□□□ 0.67
ZNF548-212ENST00000602086 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
ZNF548-212ENST00000602086 MTHFSP49914 203 aa19.25■□□□□ 0.67
ZNF548-212ENST00000602086 SLAIN2Q9P270 581 aa19.25■□□□□ 0.67
ZNF548-212ENST00000602086 JCADQ9P266 1359 aa19.24■□□□□ 0.67
ZNF548-212ENST00000602086 ESCO1Q5FWF5 840 aa19.24■□□□□ 0.67
ZNF548-212ENST00000602086 PIK3C2AO00443 1686 aa19.24■□□□□ 0.67
ZNF548-212ENST00000602086 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
ZNF548-212ENST00000602086 MAP2P11137 1827 aaKnown RBP19.23■□□□□ 0.67
ZNF548-212ENST00000602086 HNRNPUQ00839 825 aaKnown RBP eCLIP19.23■□□□□ 0.67
ZNF548-212ENST00000602086 ZBED9Q6R2W3 1325 aa19.23■□□□□ 0.67
ZNF548-212ENST00000602086 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
ZNF548-212ENST00000602086 COL3A1P02461 1466 aaPredicted RBP19.22■□□□□ 0.67
ZNF548-212ENST00000602086 AHDC1Q5TGY3 1603 aaPredicted RBP19.22■□□□□ 0.67
ZNF548-212ENST00000602086 TNNT2P45379 298 aaPredicted RBP19.21■□□□□ 0.67
ZNF548-212ENST00000602086 CDK12Q9NYV4 1490 aaPredicted RBP19.2■□□□□ 0.66
ZNF548-212ENST00000602086 TRPM3Q9HCF6 1732 aaPredicted RBP19.2■□□□□ 0.66
ZNF548-212ENST00000602086 ORAI2Q96SN7 254 aa19.19■□□□□ 0.66
ZNF548-212ENST00000602086 POLKQ9UBT6 870 aa19.19■□□□□ 0.66
ZNF548-212ENST00000602086 ADAMTS8Q9UP79 889 aa19.19■□□□□ 0.66
ZNF548-212ENST00000602086 MARF1Q9Y4F3 1742 aaKnown RBP19.19■□□□□ 0.66
ZNF548-212ENST00000602086 PSME1Q06323 249 aa19.18■□□□□ 0.66
ZNF548-212ENST00000602086 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
ZNF548-212ENST00000602086 KIF24Q5T7B8 1368 aa19.17■□□□□ 0.66
ZNF548-212ENST00000602086 NGEFQ8N5V2 710 aa19.16■□□□□ 0.66
ZNF548-212ENST00000602086 NUDCQ9Y266 331 aa19.16■□□□□ 0.66
ZNF548-212ENST00000602086 MEX3CQ5U5Q3 659 aaKnown RBP19.15■□□□□ 0.66
ZNF548-212ENST00000602086 SBNO1A3KN83 1393 aa19.15■□□□□ 0.66
ZNF548-212ENST00000602086 NPHP3Q7Z494 1330 aa19.14■□□□□ 0.65
ZNF548-212ENST00000602086 NLRP6P59044 892 aa19.13■□□□□ 0.65
ZNF548-212ENST00000602086 ABTB2Q8N961 1025 aa19.13■□□□□ 0.65
ZNF548-212ENST00000602086 NHSL1Q5SYE7 1610 aa19.13■□□□□ 0.65
ZNF548-212ENST00000602086 ALS2Q96Q42 1657 aa19.13■□□□□ 0.65
ZNF548-212ENST00000602086 FOXO3O43524 673 aa19.12■□□□□ 0.65
ZNF548-212ENST00000602086 DIAPH1O60610 1272 aaKnown RBP19.12■□□□□ 0.65
ZNF548-212ENST00000602086 NCBP3Q53F19 620 aaKnown RBP19.12■□□□□ 0.65
ZNF548-212ENST00000602086 KRT28Q7Z3Y7 464 aa19.12■□□□□ 0.65
ZNF548-212ENST00000602086 SLIT3O75094 1523 aa19.1■□□□□ 0.65
ZNF548-212ENST00000602086 SPATA31A6Q5VVP1 1343 aa19.1■□□□□ 0.65
ZNF548-212ENST00000602086 PAK3O75914 559 aaPredicted RBP19.1■□□□□ 0.65
ZNF548-212ENST00000602086 EMILIN1Q9Y6C2 1016 aa19.1■□□□□ 0.65
ZNF548-212ENST00000602086 PHRF1Q9P1Y6 1649 aaKnown RBP19.1■□□□□ 0.65
ZNF548-212ENST00000602086 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
ZNF548-212ENST00000602086 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
ZNF548-212ENST00000602086 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
ZNF548-212ENST00000602086 KCNH5Q8NCM2 988 aa19.09■□□□□ 0.65
ZNF548-212ENST00000602086 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
ZNF548-212ENST00000602086 PXDNQ92626 1479 aa19.09■□□□□ 0.65
ZNF548-212ENST00000602086 USP19O94966 1318 aa19.08■□□□□ 0.65
ZNF548-212ENST00000602086 PDE3BQ13370 1112 aa19.08■□□□□ 0.64
ZNF548-212ENST00000602086 BRINP3Q76B58 766 aa19.08■□□□□ 0.64
ZNF548-212ENST00000602086 NFAT5O94916 1531 aa19.08■□□□□ 0.64
ZNF548-212ENST00000602086 PEAK1Q9H792 1746 aa19.08■□□□□ 0.64
ZNF548-212ENST00000602086 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
ZNF548-212ENST00000602086 RUNDC1Q96C34 613 aa19.07■□□□□ 0.64
ZNF548-212ENST00000602086 FLT4P35916 1363 aa19.06■□□□□ 0.64
ZNF548-212ENST00000602086 IL13P35225 146 aa19.06■□□□□ 0.64
ZNF548-212ENST00000602086 RRS1Q15050 365 aaKnown RBP19.06■□□□□ 0.64
ZNF548-212ENST00000602086 MAP3K19Q56UN5 1328 aa19.05■□□□□ 0.64
ZNF548-212ENST00000602086 U2AF1L5P0DN76 240 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms