RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 NGLY1Q96IV0 654 aa18■□□□□ 0.47
USE1-209ENST00000601592 CRYBG1Q9Y4K1 1723 aa17.98■□□□□ 0.47
USE1-209ENST00000601592 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
USE1-209ENST00000601592 TMC1Q8TDI8 760 aa17.98■□□□□ 0.47
USE1-209ENST00000601592 TESK2Q96S53 571 aa17.98■□□□□ 0.47
USE1-209ENST00000601592 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
USE1-209ENST00000601592 PHRF1Q9P1Y6 1649 aaKnown RBP17.98■□□□□ 0.47
USE1-209ENST00000601592 ZNF772Q68DY9 489 aaPredicted RBP17.97■□□□□ 0.47
USE1-209ENST00000601592 POTEAQ6S8J7 498 aa17.97■□□□□ 0.47
USE1-209ENST00000601592 USP6P35125 1406 aa17.97■□□□□ 0.47
USE1-209ENST00000601592 PLCH1Q4KWH8 1693 aa17.96■□□□□ 0.47
USE1-209ENST00000601592 SLC24A1O60721 1099 aa17.95■□□□□ 0.46
USE1-209ENST00000601592 TMF1P82094 1093 aa17.95■□□□□ 0.46
USE1-209ENST00000601592 ABTB2Q8N961 1025 aa17.94■□□□□ 0.46
USE1-209ENST00000601592 NRKQ7Z2Y5 1582 aa17.94■□□□□ 0.46
USE1-209ENST00000601592 PIK3C2AO00443 1686 aa17.93■□□□□ 0.46
USE1-209ENST00000601592 KTN1Q86UP2 1357 aaKnown RBP17.93■□□□□ 0.46
USE1-209ENST00000601592 USP21Q9UK80 565 aa17.93■□□□□ 0.46
USE1-209ENST00000601592 BRD4O60885 1362 aaPredicted RBP17.91■□□□□ 0.46
USE1-209ENST00000601592 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
USE1-209ENST00000601592 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
USE1-209ENST00000601592 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
USE1-209ENST00000601592 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.9■□□□□ 0.46
USE1-209ENST00000601592 NWD2Q9ULI1 1742 aa17.9■□□□□ 0.46
USE1-209ENST00000601592 COL14A1Q05707 1796 aaKnown RBP17.9■□□□□ 0.46
USE1-209ENST00000601592 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
USE1-209ENST00000601592 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.46
USE1-209ENST00000601592 PUS7Q96PZ0 661 aaKnown RBP17.89■□□□□ 0.45
USE1-209ENST00000601592 QTRT2Q9H974 415 aaKnown RBP17.89■□□□□ 0.45
USE1-209ENST00000601592 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
USE1-209ENST00000601592 HSPA5P11021 654 aaKnown RBP17.88■□□□□ 0.45
USE1-209ENST00000601592 CDCA8Q53HL2 280 aa17.88■□□□□ 0.45
USE1-209ENST00000601592 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
USE1-209ENST00000601592 FNBP4Q8N3X1 1017 aaPredicted RBP17.88■□□□□ 0.45
USE1-209ENST00000601592 POLR3GLQ9BT43 218 aa17.88■□□□□ 0.45
USE1-209ENST00000601592 TERF2IPQ9NYB0 399 aa17.88■□□□□ 0.45
USE1-209ENST00000601592 TTC21BQ7Z4L5 1316 aa17.88■□□□□ 0.45
USE1-209ENST00000601592 NINLQ9Y2I6 1382 aa17.88■□□□□ 0.45
USE1-209ENST00000601592 SSH2Q76I76 1423 aa17.88■□□□□ 0.45
USE1-209ENST00000601592 MYOM1P52179 1685 aa17.87■□□□□ 0.45
USE1-209ENST00000601592 NLRP6P59044 892 aa17.87■□□□□ 0.45
USE1-209ENST00000601592 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.87■□□□□ 0.45
USE1-209ENST00000601592 PRDM11Q9NQV5 511 aa17.87■□□□□ 0.45
USE1-209ENST00000601592 A0A1W2PP64 1363 aa17.87■□□□□ 0.45
USE1-209ENST00000601592 SLIT2O94813 1529 aa17.87■□□□□ 0.45
USE1-209ENST00000601592 RXRBP28702 533 aa17.86■□□□□ 0.45
USE1-209ENST00000601592 TTC21AQ8NDW8 1320 aa17.86■□□□□ 0.45
USE1-209ENST00000601592 BCL9LQ86UU0 1499 aa17.86■□□□□ 0.45
USE1-209ENST00000601592 NRAPQ86VF7 1730 aa17.86■□□□□ 0.45
USE1-209ENST00000601592 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
USE1-209ENST00000601592 KIAA0232Q92628 1395 aa17.85■□□□□ 0.45
USE1-209ENST00000601592 TRPC5Q9UL62 973 aaPredicted RBP17.85■□□□□ 0.45
USE1-209ENST00000601592 ATRNO75882 1429 aa17.84■□□□□ 0.45
USE1-209ENST00000601592 EDC4Q6P2E9 1401 aaKnown RBP17.84■□□□□ 0.45
USE1-209ENST00000601592 USP19O94966 1318 aa17.84■□□□□ 0.45
USE1-209ENST00000601592 ZBTB7CA1YPR0 619 aa17.84■□□□□ 0.45
USE1-209ENST00000601592 FAM83GA6ND36 823 aa17.84■□□□□ 0.45
USE1-209ENST00000601592 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
USE1-209ENST00000601592 UNC5CLQ8IV45 518 aa17.83■□□□□ 0.44
USE1-209ENST00000601592 CCDC9Q9Y3X0 531 aaKnown RBP17.83■□□□□ 0.44
USE1-209ENST00000601592 SLIT3O75094 1523 aa17.82■□□□□ 0.44
USE1-209ENST00000601592 SOX12O15370 315 aa17.82■□□□□ 0.44
USE1-209ENST00000601592 RBM6P78332 1123 aaKnown RBP17.82■□□□□ 0.44
USE1-209ENST00000601592 BTG4Q9NY30 223 aa17.82■□□□□ 0.44
USE1-209ENST00000601592 ANKRD36BQ8N2N9 1353 aa17.81■□□□□ 0.44
USE1-209ENST00000601592 GCP02774 474 aa17.81■□□□□ 0.44
USE1-209ENST00000601592 NME9Q86XW9 330 aa17.81■□□□□ 0.44
USE1-209ENST00000601592 KIF20BQ96Q89 1820 aa17.81■□□□□ 0.44
USE1-209ENST00000601592 USP54Q70EL1 1684 aa17.8■□□□□ 0.44
USE1-209ENST00000601592 SOCS7O14512 581 aa17.8■□□□□ 0.44
USE1-209ENST00000601592 ZRANB1Q9UGI0 708 aa17.8■□□□□ 0.44
USE1-209ENST00000601592 LTN1O94822 1766 aa17.79■□□□□ 0.44
USE1-209ENST00000601592 RGPD5Q99666 1765 aa17.79■□□□□ 0.44
USE1-209ENST00000601592 GLI3P10071 1580 aa17.79■□□□□ 0.44
USE1-209ENST00000601592 CDK12Q9NYV4 1490 aaPredicted RBP17.78■□□□□ 0.44
USE1-209ENST00000601592 RGS12O14924 1447 aa17.78■□□□□ 0.44
USE1-209ENST00000601592 LMO7Q8WWI1 1683 aa17.77■□□□□ 0.44
USE1-209ENST00000601592 GJD4Q96KN9 370 aaPredicted RBP17.77■□□□□ 0.44
USE1-209ENST00000601592 STRN4Q9NRL3 753 aa17.77■□□□□ 0.44
USE1-209ENST00000601592 CPDO75976 1380 aa17.77■□□□□ 0.43
USE1-209ENST00000601592 KCNH5Q8NCM2 988 aa17.76■□□□□ 0.43
USE1-209ENST00000601592 VPS72Q15906 364 aa17.75■□□□□ 0.43
USE1-209ENST00000601592 NFAT5O94916 1531 aa17.75■□□□□ 0.43
USE1-209ENST00000601592 USP31Q70CQ4 1352 aa17.75■□□□□ 0.43
USE1-209ENST00000601592 CAMTA1Q9Y6Y1 1673 aa17.74■□□□□ 0.43
USE1-209ENST00000601592 EVA1CP58658 441 aa17.74■□□□□ 0.43
USE1-209ENST00000601592 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
USE1-209ENST00000601592 BRWD3Q6RI45 1802 aa17.73■□□□□ 0.43
USE1-209ENST00000601592 A0A0G2JS52 829 aa17.73■□□□□ 0.43
USE1-209ENST00000601592 MYT1Q01538 1121 aa17.73■□□□□ 0.43
USE1-209ENST00000601592 COL18A1P39060 1754 aa17.73■□□□□ 0.43
USE1-209ENST00000601592 OVOS2A0A0J9YW53 1432 aa17.72■□□□□ 0.43
USE1-209ENST00000601592 OVOS2Q6IE36 1432 aa17.72■□□□□ 0.43
USE1-209ENST00000601592 COG3Q96JB2 828 aa17.72■□□□□ 0.43
USE1-209ENST00000601592 COL5A2P05997 1499 aaPredicted RBP17.7■□□□□ 0.42
USE1-209ENST00000601592 AATKQ6ZMQ8 1374 aa17.7■□□□□ 0.42
USE1-209ENST00000601592 C11orf95C9JLR9 678 aaPredicted RBP17.7■□□□□ 0.42
USE1-209ENST00000601592 FAM98CQ17RN3 349 aaKnown RBP17.69■□□□□ 0.42
USE1-209ENST00000601592 ARHGEF25Q86VW2 580 aa17.69■□□□□ 0.42
USE1-209ENST00000601592 GGNBP2Q9H3C7 697 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms