RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 RALGAPBQ86X10 1494 aa32.57■■■□□ 2.8
SSBP4-209ENST00000601357 PLEKHG3A1L390 1219 aa32.56■■■□□ 2.8
SSBP4-209ENST00000601357 ACEP12821 1306 aa32.54■■■□□ 2.8
SSBP4-209ENST00000601357 FAM83GA6ND36 823 aa32.54■■■□□ 2.8
SSBP4-209ENST00000601357 PAK3O75914 559 aaPredicted RBP32.53■■■□□ 2.8
SSBP4-209ENST00000601357 TRIM26Q12899 539 aaPredicted RBP32.53■■■□□ 2.8
SSBP4-209ENST00000601357 NRAPQ86VF7 1730 aa32.53■■■□□ 2.8
SSBP4-209ENST00000601357 EP400Q96L91 3159 aa32.52■■■□□ 2.8
SSBP4-209ENST00000601357 ROCK2O75116 1388 aaKnown RBP32.52■■■□□ 2.8
SSBP4-209ENST00000601357 COL14A1Q05707 1796 aaKnown RBP32.52■■■□□ 2.8
SSBP4-209ENST00000601357 ATAD2Q6PL18 1390 aa32.51■■■□□ 2.79
SSBP4-209ENST00000601357 NBPF8Q3BBV2 869 aa32.51■■■□□ 2.79
SSBP4-209ENST00000601357 VPS72Q15906 364 aa32.5■■■□□ 2.79
SSBP4-209ENST00000601357 PHRF1Q9P1Y6 1649 aaKnown RBP32.5■■■□□ 2.79
SSBP4-209ENST00000601357 SRPK2P78362 688 aaKnown RBP32.49■■■□□ 2.79
SSBP4-209ENST00000601357 PPIP5K1Q6PFW1 1433 aa32.49■■■□□ 2.79
SSBP4-209ENST00000601357 CABP2Q9NPB3 220 aa32.48■■■□□ 2.79
SSBP4-209ENST00000601357 BRWD3Q6RI45 1802 aa32.42■■■□□ 2.78
SSBP4-209ENST00000601357 BTG4Q9NY30 223 aa32.41■■■□□ 2.78
SSBP4-209ENST00000601357 ONECUT3O60422 494 aaPredicted RBP32.4■■■□□ 2.78
SSBP4-209ENST00000601357 EVC2Q86UK5 1308 aa32.4■■■□□ 2.78
SSBP4-209ENST00000601357 NRKQ7Z2Y5 1582 aa32.38■■■□□ 2.77
SSBP4-209ENST00000601357 BRD4O60885 1362 aaPredicted RBP32.38■■■□□ 2.77
SSBP4-209ENST00000601357 TONSLQ96HA7 1378 aa32.38■■■□□ 2.77
SSBP4-209ENST00000601357 KIAA0232Q92628 1395 aa32.36■■■□□ 2.77
SSBP4-209ENST00000601357 NUTM2GQ5VZR2 741 aa32.36■■■□□ 2.77
SSBP4-209ENST00000601357 PRDM11Q9NQV5 511 aa32.36■■■□□ 2.77
SSBP4-209ENST00000601357 CABP1Q9NZU7 370 aa32.36■■■□□ 2.77
SSBP4-209ENST00000601357 ABTB2Q8N961 1025 aa32.35■■■□□ 2.77
SSBP4-209ENST00000601357 CCDC9Q9Y3X0 531 aaKnown RBP32.35■■■□□ 2.77
SSBP4-209ENST00000601357 USP6P35125 1406 aa32.34■■■□□ 2.77
SSBP4-209ENST00000601357 USP19O94966 1318 aa32.34■■■□□ 2.77
SSBP4-209ENST00000601357 SEPT12Q8IYM1 358 aa32.34■■■□□ 2.77
SSBP4-209ENST00000601357 SBNO2Q9Y2G9 1366 aa32.33■■■□□ 2.77
SSBP4-209ENST00000601357 SSH2Q76I76 1423 aa32.32■■■□□ 2.76
SSBP4-209ENST00000601357 CARD11Q9BXL7 1154 aa32.3■■■□□ 2.76
SSBP4-209ENST00000601357 AKAP12Q02952 1782 aa32.29■■■□□ 2.76
SSBP4-209ENST00000601357 SPATA31A5Q5VU36 1347 aa32.28■■■□□ 2.76
SSBP4-209ENST00000601357 SPATA31A7Q8IWB4 1347 aa32.28■■■□□ 2.76
SSBP4-209ENST00000601357 ZC3H6P61129 1189 aaKnown RBP32.28■■■□□ 2.76
SSBP4-209ENST00000601357 CCDC125Q86Z20 511 aa32.28■■■□□ 2.76
SSBP4-209ENST00000601357 CPDO75976 1380 aa32.28■■■□□ 2.76
SSBP4-209ENST00000601357 LMO7Q8WWI1 1683 aa32.27■■■□□ 2.76
SSBP4-209ENST00000601357 CHRNA2Q15822 529 aa32.27■■■□□ 2.76
SSBP4-209ENST00000601357 NLRP13Q86W25 1043 aa32.27■■■□□ 2.76
SSBP4-209ENST00000601357 PIK3C2AO00443 1686 aa32.27■■■□□ 2.76
SSBP4-209ENST00000601357 THSD7AQ9UPZ6 1657 aa32.25■■■□□ 2.75
SSBP4-209ENST00000601357 FAM98CQ17RN3 349 aaKnown RBP32.24■■■□□ 2.75
SSBP4-209ENST00000601357 SLIT3O75094 1523 aa32.23■■■□□ 2.75
SSBP4-209ENST00000601357 CPSF1Q10570 1443 aaKnown RBP32.23■■■□□ 2.75
SSBP4-209ENST00000601357 CAMTA1Q9Y6Y1 1673 aa32.22■■■□□ 2.75
SSBP4-209ENST00000601357 GCP02774 474 aa32.22■■■□□ 2.75
SSBP4-209ENST00000601357 KRT27Q7Z3Y8 459 aa32.22■■■□□ 2.75
SSBP4-209ENST00000601357 BLMP54132 1417 aaPredicted RBP32.21■■■□□ 2.75
SSBP4-209ENST00000601357 ZNF692Q9BU19 519 aaPredicted RBP32.2■■■□□ 2.75
SSBP4-209ENST00000601357 SPATA31A1Q5TZJ5 1347 aa32.2■■■□□ 2.74
SSBP4-209ENST00000601357 MON2Q7Z3U7 1717 aa32.17■■■□□ 2.74
SSBP4-209ENST00000601357 NLRP6P59044 892 aa32.17■■■□□ 2.74
SSBP4-209ENST00000601357 STRN4Q9NRL3 753 aa32.16■■■□□ 2.74
SSBP4-209ENST00000601357 A0A0G2JS52 829 aa32.15■■■□□ 2.74
SSBP4-209ENST00000601357 MYT1Q01538 1121 aa32.15■■■□□ 2.74
SSBP4-209ENST00000601357 TTC21BQ7Z4L5 1316 aa32.15■■■□□ 2.74
SSBP4-209ENST00000601357 CD163L1Q9NR16 1453 aa32.12■■■□□ 2.73
SSBP4-209ENST00000601357 TTC21AQ8NDW8 1320 aa32.12■■■□□ 2.73
SSBP4-209ENST00000601357 COL5A2P05997 1499 aaPredicted RBP32.11■■■□□ 2.73
SSBP4-209ENST00000601357 KTN1Q86UP2 1357 aaKnown RBP32.11■■■□□ 2.73
SSBP4-209ENST00000601357 COL18A1P39060 1754 aa32.1■■■□□ 2.73
SSBP4-209ENST00000601357 AATKQ6ZMQ8 1374 aa32.09■■■□□ 2.73
SSBP4-209ENST00000601357 EVA1CP58658 441 aa32.09■■■□□ 2.73
SSBP4-209ENST00000601357 LARP1Q6PKG0 1096 aaKnown RBP32.08■■■□□ 2.73
SSBP4-209ENST00000601357 BARGINQ6ZT62 677 aa32.07■■■□□ 2.72
SSBP4-209ENST00000601357 PUS7Q96PZ0 661 aaKnown RBP32.07■■■□□ 2.72
SSBP4-209ENST00000601357 TESK2Q96S53 571 aa32.07■■■□□ 2.72
SSBP4-209ENST00000601357 USP54Q70EL1 1684 aa32.06■■■□□ 2.72
SSBP4-209ENST00000601357 NFAT5O94916 1531 aa32.04■■■□□ 2.72
SSBP4-209ENST00000601357 ST20-MTHFSA0A0A6YYL1 179 aa32.03■■■□□ 2.72
SSBP4-209ENST00000601357 USP35Q9P2H5 1018 aa32.03■■■□□ 2.72
SSBP4-209ENST00000601357 DEFB132Q7Z7B7 95 aa32.02■■■□□ 2.72
SSBP4-209ENST00000601357 RGPD1P0DJD0 1748 aa32.02■■■□□ 2.72
SSBP4-209ENST00000601357 SF3B2Q13435 895 aaKnown RBP32.01■■■□□ 2.71
SSBP4-209ENST00000601357 FAM182BQ5T319 152 aa32.01■■■□□ 2.71
SSBP4-209ENST00000601357 TCP11L2Q8N4U5 519 aa32.01■■■□□ 2.71
SSBP4-209ENST00000601357 KCNH5Q8NCM2 988 aa32.01■■■□□ 2.71
SSBP4-209ENST00000601357 CRB1P82279 1406 aa32■■■□□ 2.71
SSBP4-209ENST00000601357 USP31Q70CQ4 1352 aa32■■■□□ 2.71
SSBP4-209ENST00000601357 ARHGEF25Q86VW2 580 aa32■■■□□ 2.71
SSBP4-209ENST00000601357 SLC12A5Q9H2X9 1139 aa32■■■□□ 2.71
SSBP4-209ENST00000601357 THRAP3Q9Y2W1 955 aaKnown RBP32■■■□□ 2.71
SSBP4-209ENST00000601357 TMC1Q8TDI8 760 aa31.99■■■□□ 2.71
SSBP4-209ENST00000601357 PARP4Q9UKK3 1724 aaKnown RBP31.98■■■□□ 2.71
SSBP4-209ENST00000601357 ZBTB7CA1YPR0 619 aa31.98■■■□□ 2.71
SSBP4-209ENST00000601357 CLSPNQ9HAW4 1339 aa31.98■■■□□ 2.71
SSBP4-209ENST00000601357 TNS1Q9HBL0 1735 aaKnown RBP31.97■■■□□ 2.71
SSBP4-209ENST00000601357 ZRANB1Q9UGI0 708 aa31.97■■■□□ 2.71
SSBP4-209ENST00000601357 AXIN2Q9Y2T1 843 aa31.97■■■□□ 2.71
SSBP4-209ENST00000601357 EDC4Q6P2E9 1401 aaKnown RBP31.97■■■□□ 2.71
SSBP4-209ENST00000601357 RGPD5Q99666 1765 aa31.96■■■□□ 2.71
SSBP4-209ENST00000601357 A0A1W2PP64 1363 aa31.96■■■□□ 2.71
SSBP4-209ENST00000601357 HDGFL2Q7Z4V5 671 aaPredicted RBP31.96■■■□□ 2.71
SSBP4-209ENST00000601357 ABCC6O95255 1503 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms