RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 BRWD3Q6RI45 1802 aa26.2■■□□□ 1.78
CHMP2A-208ENST00000601220 PAK3O75914 559 aaPredicted RBP26.19■■□□□ 1.78
CHMP2A-208ENST00000601220 KRT27Q7Z3Y8 459 aa26.19■■□□□ 1.78
CHMP2A-208ENST00000601220 SRCAPQ6ZRS2 3230 aa26.19■■□□□ 1.78
CHMP2A-208ENST00000601220 NRAPQ86VF7 1730 aa26.19■■□□□ 1.78
CHMP2A-208ENST00000601220 CRYBG1Q9Y4K1 1723 aa26.17■■□□□ 1.78
CHMP2A-208ENST00000601220 POLR3AO14802 1390 aaPredicted RBP26.17■■□□□ 1.78
CHMP2A-208ENST00000601220 COL14A1Q05707 1796 aaKnown RBP26.16■■□□□ 1.78
CHMP2A-208ENST00000601220 PLEKHG3A1L390 1219 aa26.16■■□□□ 1.78
CHMP2A-208ENST00000601220 FAM98CQ17RN3 349 aaKnown RBP26.16■■□□□ 1.78
CHMP2A-208ENST00000601220 DEFB132Q7Z7B7 95 aa26.16■■□□□ 1.78
CHMP2A-208ENST00000601220 KIAA1210Q9ULL0 1709 aa26.15■■□□□ 1.78
CHMP2A-208ENST00000601220 CCDC61Q9Y6R9 512 aa26.15■■□□□ 1.78
CHMP2A-208ENST00000601220 SPATA31A5Q5VU36 1347 aa26.14■■□□□ 1.78
CHMP2A-208ENST00000601220 SPATA31A7Q8IWB4 1347 aa26.14■■□□□ 1.78
CHMP2A-208ENST00000601220 NBPF8Q3BBV2 869 aa26.14■■□□□ 1.78
CHMP2A-208ENST00000601220 ACEP12821 1306 aa26.14■■□□□ 1.77
CHMP2A-208ENST00000601220 PRDM11Q9NQV5 511 aa26.12■■□□□ 1.77
CHMP2A-208ENST00000601220 ITSN1Q15811 1721 aa26.11■■□□□ 1.77
CHMP2A-208ENST00000601220 KIAA0232Q92628 1395 aa26.1■■□□□ 1.77
CHMP2A-208ENST00000601220 TOPAZ1Q8N9V7 1692 aa26.09■■□□□ 1.77
CHMP2A-208ENST00000601220 NUTM2GQ5VZR2 741 aa26.08■■□□□ 1.77
CHMP2A-208ENST00000601220 SF3B2Q13435 895 aaKnown RBP26.07■■□□□ 1.76
CHMP2A-208ENST00000601220 CHRNA2Q15822 529 aa26.07■■□□□ 1.76
CHMP2A-208ENST00000601220 A0A0G2JS52 829 aa26.05■■□□□ 1.76
CHMP2A-208ENST00000601220 ZC3H6P61129 1189 aaKnown RBP26.05■■□□□ 1.76
CHMP2A-208ENST00000601220 MYT1Q01538 1121 aa26.05■■□□□ 1.76
CHMP2A-208ENST00000601220 L3MBTL2Q969R5 705 aa26.05■■□□□ 1.76
CHMP2A-208ENST00000601220 SPATA31A1Q5TZJ5 1347 aa26.05■■□□□ 1.76
CHMP2A-208ENST00000601220 CENPJQ9HC77 1338 aaPredicted RBP26.05■■□□□ 1.76
CHMP2A-208ENST00000601220 CABP2Q9NPB3 220 aa26.03■■□□□ 1.76
CHMP2A-208ENST00000601220 PHRF1Q9P1Y6 1649 aaKnown RBP26.03■■□□□ 1.76
CHMP2A-208ENST00000601220 THSD7AQ9UPZ6 1657 aa26.03■■□□□ 1.76
CHMP2A-208ENST00000601220 FAM182BQ5T319 152 aa26.02■■□□□ 1.76
CHMP2A-208ENST00000601220 USP19O94966 1318 aa26.02■■□□□ 1.76
CHMP2A-208ENST00000601220 SRPK2P78362 688 aaKnown RBP26.01■■□□□ 1.75
CHMP2A-208ENST00000601220 ABTB2Q8N961 1025 aa26.01■■□□□ 1.75
CHMP2A-208ENST00000601220 PPIP5K1Q6PFW1 1433 aa26■■□□□ 1.75
CHMP2A-208ENST00000601220 SIN3AQ96ST3 1273 aa25.99■■□□□ 1.75
CHMP2A-208ENST00000601220 STRN4Q9NRL3 753 aa25.99■■□□□ 1.75
CHMP2A-208ENST00000601220 CPDO75976 1380 aa25.98■■□□□ 1.75
CHMP2A-208ENST00000601220 BAG6P46379 1132 aa25.97■■□□□ 1.75
CHMP2A-208ENST00000601220 NRKQ7Z2Y5 1582 aa25.97■■□□□ 1.75
CHMP2A-208ENST00000601220 CAMTA1Q9Y6Y1 1673 aa25.96■■□□□ 1.75
CHMP2A-208ENST00000601220 SSH2Q76I76 1423 aa25.96■■□□□ 1.75
CHMP2A-208ENST00000601220 GCP02774 474 aa25.95■■□□□ 1.74
CHMP2A-208ENST00000601220 CABP1Q9NZU7 370 aa25.95■■□□□ 1.74
CHMP2A-208ENST00000601220 BRD4O60885 1362 aaPredicted RBP25.95■■□□□ 1.74
CHMP2A-208ENST00000601220 EN1Q05925 392 aaPredicted RBP25.94■■□□□ 1.74
CHMP2A-208ENST00000601220 BARGINQ6ZT62 677 aa25.94■■□□□ 1.74
CHMP2A-208ENST00000601220 NLRP13Q86W25 1043 aa25.94■■□□□ 1.74
CHMP2A-208ENST00000601220 LARP1Q6PKG0 1096 aaKnown RBP25.93■■□□□ 1.74
CHMP2A-208ENST00000601220 DISP2A7MBM2 1401 aa25.92■■□□□ 1.74
CHMP2A-208ENST00000601220 EVA1CP58658 441 aa25.92■■□□□ 1.74
CHMP2A-208ENST00000601220 LMO7Q8WWI1 1683 aa25.92■■□□□ 1.74
CHMP2A-208ENST00000601220 USP6P35125 1406 aa25.9■■□□□ 1.74
CHMP2A-208ENST00000601220 USP35Q9P2H5 1018 aa25.9■■□□□ 1.74
CHMP2A-208ENST00000601220 QRICH2Q9H0J4 1663 aa25.9■■□□□ 1.74
CHMP2A-208ENST00000601220 FAM196AQ6ZSG2 479 aa25.89■■□□□ 1.74
CHMP2A-208ENST00000601220 PSDA5PKW4 1024 aaPredicted RBP25.87■■□□□ 1.73
CHMP2A-208ENST00000601220 NEUROD1Q13562 356 aa25.87■■□□□ 1.73
CHMP2A-208ENST00000601220 TCP11L2Q8N4U5 519 aa25.87■■□□□ 1.73
CHMP2A-208ENST00000601220 RGPD1P0DJD0 1748 aa25.87■■□□□ 1.73
CHMP2A-208ENST00000601220 TRPM1Q7Z4N2 1603 aa25.87■■□□□ 1.73
CHMP2A-208ENST00000601220 EVC2Q86UK5 1308 aa25.87■■□□□ 1.73
CHMP2A-208ENST00000601220 CAMKK2Q96RR4 588 aa25.86■■□□□ 1.73
CHMP2A-208ENST00000601220 TRIM37O94972 964 aa25.85■■□□□ 1.73
CHMP2A-208ENST00000601220 NLRP6P59044 892 aa25.85■■□□□ 1.73
CHMP2A-208ENST00000601220 COL5A2P05997 1499 aaPredicted RBP25.85■■□□□ 1.73
CHMP2A-208ENST00000601220 EZH2Q15910 746 aaKnown RBP25.84■■□□□ 1.73
CHMP2A-208ENST00000601220 TNS1Q9HBL0 1735 aaKnown RBP25.84■■□□□ 1.73
CHMP2A-208ENST00000601220 THRAP3Q9Y2W1 955 aaKnown RBP25.84■■□□□ 1.73
CHMP2A-208ENST00000601220 SLIT3O75094 1523 aa25.83■■□□□ 1.73
CHMP2A-208ENST00000601220 ROCK2O75116 1388 aaKnown RBP25.83■■□□□ 1.73
CHMP2A-208ENST00000601220 AATKQ6ZMQ8 1374 aa25.82■■□□□ 1.72
CHMP2A-208ENST00000601220 PDE3BQ13370 1112 aa25.82■■□□□ 1.72
CHMP2A-208ENST00000601220 LRP5O75197 1615 aa25.8■■□□□ 1.72
CHMP2A-208ENST00000601220 ZNF692Q9BU19 519 aaPredicted RBP25.79■■□□□ 1.72
CHMP2A-208ENST00000601220 TTC21BQ7Z4L5 1316 aa25.79■■□□□ 1.72
CHMP2A-208ENST00000601220 APBA3O96018 575 aa25.78■■□□□ 1.72
CHMP2A-208ENST00000601220 AXIN2Q9Y2T1 843 aa25.78■■□□□ 1.72
CHMP2A-208ENST00000601220 CRB1P82279 1406 aa25.78■■□□□ 1.72
CHMP2A-208ENST00000601220 PIK3C2AO00443 1686 aa25.77■■□□□ 1.72
CHMP2A-208ENST00000601220 R3HDM1Q15032 1099 aaKnown RBP25.77■■□□□ 1.72
CHMP2A-208ENST00000601220 CPSF1Q10570 1443 aaKnown RBP25.77■■□□□ 1.72
CHMP2A-208ENST00000601220 ARHGEF25Q86VW2 580 aa25.75■■□□□ 1.71
CHMP2A-208ENST00000601220 PARD3Q8TEW0 1356 aa25.74■■□□□ 1.71
CHMP2A-208ENST00000601220 ZBTB7CA1YPR0 619 aa25.74■■□□□ 1.71
CHMP2A-208ENST00000601220 COL18A1P39060 1754 aa25.74■■□□□ 1.71
CHMP2A-208ENST00000601220 TTC21AQ8NDW8 1320 aa25.72■■□□□ 1.71
CHMP2A-208ENST00000601220 PARP4Q9UKK3 1724 aaKnown RBP25.71■■□□□ 1.71
CHMP2A-208ENST00000601220 SBNO2Q9Y2G9 1366 aa25.71■■□□□ 1.71
CHMP2A-208ENST00000601220 KCNH5Q8NCM2 988 aa25.7■■□□□ 1.7
CHMP2A-208ENST00000601220 WDR17Q8IZU2 1322 aa25.69■■□□□ 1.7
CHMP2A-208ENST00000601220 TOM1L2Q6ZVM7 507 aa25.69■■□□□ 1.7
CHMP2A-208ENST00000601220 AKAP12Q02952 1782 aa25.68■■□□□ 1.7
CHMP2A-208ENST00000601220 KTN1Q86UP2 1357 aaKnown RBP25.68■■□□□ 1.7
CHMP2A-208ENST00000601220 C11orf95C9JLR9 678 aaPredicted RBP25.67■■□□□ 1.7
CHMP2A-208ENST00000601220 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
CHMP2A-208ENST00000601220 CARD11Q9BXL7 1154 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms