RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 CCDC7Q96M83 1385 aa28.44■■■□□ 2.14
SIN3B-211ENST00000601141 JCADQ9P266 1359 aa28.44■■■□□ 2.14
SIN3B-211ENST00000601141 WASHC2AQ641Q2 1341 aa28.43■■■□□ 2.14
SIN3B-211ENST00000601141 MON2Q7Z3U7 1717 aa28.41■■■□□ 2.14
SIN3B-211ENST00000601141 PNPLA6Q8IY17 1366 aa28.41■■■□□ 2.14
SIN3B-211ENST00000601141 BRD4O60885 1362 aaPredicted RBP28.4■■■□□ 2.14
SIN3B-211ENST00000601141 ARHGEF10O15013 1369 aa28.39■■■□□ 2.14
SIN3B-211ENST00000601141 SHPRHQ149N8 1683 aa28.39■■■□□ 2.13
SIN3B-211ENST00000601141 NRKQ7Z2Y5 1582 aa28.38■■■□□ 2.13
SIN3B-211ENST00000601141 TTC21BQ7Z4L5 1316 aa28.37■■■□□ 2.13
SIN3B-211ENST00000601141 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.37■■■□□ 2.13
SIN3B-211ENST00000601141 EDC4Q6P2E9 1401 aaKnown RBP28.37■■■□□ 2.13
SIN3B-211ENST00000601141 SSH2Q76I76 1423 aa28.37■■■□□ 2.13
SIN3B-211ENST00000601141 ALS2Q96Q42 1657 aa28.37■■■□□ 2.13
SIN3B-211ENST00000601141 PLEKHG5O94827 1062 aa28.36■■■□□ 2.13
SIN3B-211ENST00000601141 ABTB2Q8N961 1025 aa28.36■■■□□ 2.13
SIN3B-211ENST00000601141 NUTM2GQ5VZR2 741 aa28.34■■■□□ 2.13
SIN3B-211ENST00000601141 TTC21AQ8NDW8 1320 aa28.34■■■□□ 2.13
SIN3B-211ENST00000601141 PANK3Q9H999 370 aa28.34■■■□□ 2.13
SIN3B-211ENST00000601141 COL22A1Q8NFW1 1626 aaPredicted RBP28.32■■■□□ 2.12
SIN3B-211ENST00000601141 SPATA31A6Q5VVP1 1343 aa28.31■■■□□ 2.12
SIN3B-211ENST00000601141 NSD3Q9BZ95 1437 aa28.31■■■□□ 2.12
SIN3B-211ENST00000601141 NUTM2BA6NNL0 878 aaPredicted RBP28.3■■■□□ 2.12
SIN3B-211ENST00000601141 NUTM2EB1AL46 878 aaPredicted RBP28.3■■■□□ 2.12
SIN3B-211ENST00000601141 NUTM2AQ8IVF1 878 aaPredicted RBP28.3■■■□□ 2.12
SIN3B-211ENST00000601141 CARD14Q9BXL6 1004 aa28.3■■■□□ 2.12
SIN3B-211ENST00000601141 PIK3C2AO00443 1686 aa28.29■■■□□ 2.12
SIN3B-211ENST00000601141 NLRP6P59044 892 aa28.28■■■□□ 2.12
SIN3B-211ENST00000601141 HAP1P54257 671 aaPredicted RBP28.27■■■□□ 2.12
SIN3B-211ENST00000601141 NME9Q86XW9 330 aa28.27■■■□□ 2.12
SIN3B-211ENST00000601141 CABLES1Q8TDN4 633 aa28.27■■■□□ 2.12
SIN3B-211ENST00000601141 NLRP13Q86W25 1043 aa28.27■■■□□ 2.12
SIN3B-211ENST00000601141 MED1Q15648 1581 aaPredicted RBP28.26■■■□□ 2.11
SIN3B-211ENST00000601141 ZRANB1Q9UGI0 708 aa28.23■■■□□ 2.11
SIN3B-211ENST00000601141 ZNF316A6NFI3 1004 aaPredicted RBP28.22■■■□□ 2.11
SIN3B-211ENST00000601141 LRP6O75581 1613 aa28.22■■■□□ 2.11
SIN3B-211ENST00000601141 CGNL1Q0VF96 1302 aa28.21■■■□□ 2.11
SIN3B-211ENST00000601141 ABCA3Q99758 1704 aa28.21■■■□□ 2.11
SIN3B-211ENST00000601141 USP19O94966 1318 aa28.21■■■□□ 2.11
SIN3B-211ENST00000601141 ADAMTS2O95450 1211 aa28.2■■■□□ 2.1
SIN3B-211ENST00000601141 MEX3CQ5U5Q3 659 aaKnown RBP28.2■■■□□ 2.1
SIN3B-211ENST00000601141 KNSTRNQ9Y448 316 aa28.2■■■□□ 2.1
SIN3B-211ENST00000601141 USP31Q70CQ4 1352 aa28.19■■■□□ 2.1
SIN3B-211ENST00000601141 CRYBG1Q9Y4K1 1723 aa28.19■■■□□ 2.1
SIN3B-211ENST00000601141 FYB1O15117 783 aa28.19■■■□□ 2.1
SIN3B-211ENST00000601141 GGNBP2Q9H3C7 697 aa28.19■■■□□ 2.1
SIN3B-211ENST00000601141 PHRF1Q9P1Y6 1649 aaKnown RBP28.19■■■□□ 2.1
SIN3B-211ENST00000601141 COG3Q96JB2 828 aa28.18■■■□□ 2.1
SIN3B-211ENST00000601141 KIF20BQ96Q89 1820 aa28.18■■■□□ 2.1
SIN3B-211ENST00000601141 SOX12O15370 315 aa28.16■■■□□ 2.1
SIN3B-211ENST00000601141 OVOS2A0A0J9YW53 1432 aa28.16■■■□□ 2.1
SIN3B-211ENST00000601141 OVOS2Q6IE36 1432 aa28.16■■■□□ 2.1
SIN3B-211ENST00000601141 MARF1Q9Y4F3 1742 aaKnown RBP28.16■■■□□ 2.1
SIN3B-211ENST00000601141 SLIT3O75094 1523 aa28.15■■■□□ 2.1
SIN3B-211ENST00000601141 USP54Q70EL1 1684 aa28.15■■■□□ 2.1
SIN3B-211ENST00000601141 GCP02774 474 aa28.15■■■□□ 2.1
SIN3B-211ENST00000601141 DDX10Q13206 875 aaKnown RBP28.14■■■□□ 2.09
SIN3B-211ENST00000601141 PER1O15534 1290 aaPredicted RBP28.12■■■□□ 2.09
SIN3B-211ENST00000601141 ZC3H6P61129 1189 aaKnown RBP28.12■■■□□ 2.09
SIN3B-211ENST00000601141 KCNH5Q8NCM2 988 aa28.12■■■□□ 2.09
SIN3B-211ENST00000601141 C8orf37Q96NL8 207 aa28.11■■■□□ 2.09
SIN3B-211ENST00000601141 NSD2O96028 1365 aa28.09■■■□□ 2.09
SIN3B-211ENST00000601141 KIAA0232Q92628 1395 aa28.09■■■□□ 2.09
SIN3B-211ENST00000601141 ZBTB7CA1YPR0 619 aa28.08■■■□□ 2.09
SIN3B-211ENST00000601141 AMER1Q5JTC6 1135 aaPredicted RBP28.08■■■□□ 2.09
SIN3B-211ENST00000601141 PRDM11Q9NQV5 511 aa28.08■■■□□ 2.09
SIN3B-211ENST00000601141 CNGB1Q14028 1251 aaPredicted RBP28.07■■■□□ 2.08
SIN3B-211ENST00000601141 NGLY1Q96IV0 654 aa28.07■■■□□ 2.08
SIN3B-211ENST00000601141 NFAT5O94916 1531 aa28.06■■■□□ 2.08
SIN3B-211ENST00000601141 ANKRD26Q9UPS8 1709 aa28.04■■■□□ 2.08
SIN3B-211ENST00000601141 CHRNA2Q15822 529 aa28.04■■■□□ 2.08
SIN3B-211ENST00000601141 CC2D1BQ5T0F9 858 aaKnown RBP28.04■■■□□ 2.08
SIN3B-211ENST00000601141 CPDO75976 1380 aa28.04■■■□□ 2.08
SIN3B-211ENST00000601141 FAM83GA6ND36 823 aa28.03■■■□□ 2.08
SIN3B-211ENST00000601141 PHF23Q9BUL5 403 aaPredicted RBP28.03■■■□□ 2.08
SIN3B-211ENST00000601141 MORC1Q86VD1 984 aa28.02■■■□□ 2.08
SIN3B-211ENST00000601141 FBLN1P23142 703 aa28.01■■■□□ 2.07
SIN3B-211ENST00000601141 TNNT2P45379 298 aaPredicted RBP28.01■■■□□ 2.07
SIN3B-211ENST00000601141 AFF2P51816 1311 aa28.01■■■□□ 2.07
SIN3B-211ENST00000601141 COL14A1Q05707 1796 aaKnown RBP28■■■□□ 2.07
SIN3B-211ENST00000601141 ARHGEF25Q86VW2 580 aa28■■■□□ 2.07
SIN3B-211ENST00000601141 NPC1L1Q9UHC9 1359 aa27.99■■■□□ 2.07
SIN3B-211ENST00000601141 PLCH1Q4KWH8 1693 aa27.98■■■□□ 2.07
SIN3B-211ENST00000601141 RRS1Q15050 365 aaKnown RBP27.96■■■□□ 2.07
SIN3B-211ENST00000601141 BTG4Q9NY30 223 aa27.96■■■□□ 2.07
SIN3B-211ENST00000601141 LTN1O94822 1766 aa27.96■■■□□ 2.07
SIN3B-211ENST00000601141 FNBP4Q8N3X1 1017 aaPredicted RBP27.95■■■□□ 2.07
SIN3B-211ENST00000601141 USP21Q9UK80 565 aa27.95■■■□□ 2.07
SIN3B-211ENST00000601141 SLIT2O94813 1529 aa27.95■■■□□ 2.07
SIN3B-211ENST00000601141 AATKQ6ZMQ8 1374 aa27.95■■■□□ 2.06
SIN3B-211ENST00000601141 MAP3K19Q56UN5 1328 aa27.95■■■□□ 2.06
SIN3B-211ENST00000601141 NWD2Q9ULI1 1742 aa27.92■■■□□ 2.06
SIN3B-211ENST00000601141 AMPHP49418 695 aa27.92■■■□□ 2.06
SIN3B-211ENST00000601141 LMO7Q8WWI1 1683 aa27.92■■■□□ 2.06
SIN3B-211ENST00000601141 ZNF772Q68DY9 489 aaPredicted RBP27.91■■■□□ 2.06
SIN3B-211ENST00000601141 BCL9LQ86UU0 1499 aa27.91■■■□□ 2.06
SIN3B-211ENST00000601141 UNC5CLQ8IV45 518 aa27.9■■■□□ 2.06
SIN3B-211ENST00000601141 CAMTA1Q9Y6Y1 1673 aa27.9■■■□□ 2.06
SIN3B-211ENST00000601141 PPM1GO15355 546 aaPredicted RBP27.89■■■□□ 2.06
SIN3B-211ENST00000601141 STRN4Q9NRL3 753 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms