RNA–Protein interactions for RNA: ENST00000601009.1

FARP1-232, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-232ENST00000601009 NBPF1Q3BBV0 1214 aa13.19□□□□□ -0.3
FARP1-232ENST00000601009 POLR3AO14802 1390 aaPredicted RBP13.19□□□□□ -0.3
FARP1-232ENST00000601009 FAM83GA6ND36 823 aa13.18□□□□□ -0.3
FARP1-232ENST00000601009 SRPK2P78362 688 aaKnown RBP13.18□□□□□ -0.3
FARP1-232ENST00000601009 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
FARP1-232ENST00000601009 ACEP12821 1306 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 NRAPQ86VF7 1730 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 A0A0G2JS52 829 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 PLEKHG3A1L390 1219 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 MYT1Q01538 1121 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 SEPT12Q8IYM1 358 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 L3MBTL2Q969R5 705 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 PRDM11Q9NQV5 511 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 QRICH2Q9H0J4 1663 aa13.17□□□□□ -0.3
FARP1-232ENST00000601009 CRYBG1Q9Y4K1 1723 aa13.16□□□□□ -0.3
FARP1-232ENST00000601009 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
FARP1-232ENST00000601009 BRD4O60885 1362 aaPredicted RBP13.16□□□□□ -0.3
FARP1-232ENST00000601009 BLMP54132 1417 aaPredicted RBP13.15□□□□□ -0.3
FARP1-232ENST00000601009 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
FARP1-232ENST00000601009 ONECUT3O60422 494 aaPredicted RBP13.15□□□□□ -0.3
FARP1-232ENST00000601009 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
FARP1-232ENST00000601009 ROCK2O75116 1388 aaKnown RBP13.15□□□□□ -0.3
FARP1-232ENST00000601009 BRWD3Q6RI45 1802 aa13.15□□□□□ -0.3
FARP1-232ENST00000601009 TRPM1Q7Z4N2 1603 aa13.14□□□□□ -0.31
FARP1-232ENST00000601009 PHRF1Q9P1Y6 1649 aaKnown RBP13.14□□□□□ -0.31
FARP1-232ENST00000601009 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
FARP1-232ENST00000601009 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
FARP1-232ENST00000601009 ZRANB1Q9UGI0 708 aa13.14□□□□□ -0.31
FARP1-232ENST00000601009 EVC2Q86UK5 1308 aa13.13□□□□□ -0.31
FARP1-232ENST00000601009 KIAA0232Q92628 1395 aa13.13□□□□□ -0.31
FARP1-232ENST00000601009 ABTB2Q8N961 1025 aa13.13□□□□□ -0.31
FARP1-232ENST00000601009 SIN3AQ96ST3 1273 aa13.13□□□□□ -0.31
FARP1-232ENST00000601009 FAM98CQ17RN3 349 aaKnown RBP13.12□□□□□ -0.31
FARP1-232ENST00000601009 CABP2Q9NPB3 220 aa13.12□□□□□ -0.31
FARP1-232ENST00000601009 SPATA31A5Q5VU36 1347 aa13.12□□□□□ -0.31
FARP1-232ENST00000601009 SPATA31A7Q8IWB4 1347 aa13.12□□□□□ -0.31
FARP1-232ENST00000601009 NUTM2GQ5VZR2 741 aa13.11□□□□□ -0.31
FARP1-232ENST00000601009 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
FARP1-232ENST00000601009 SRCAPQ6ZRS2 3230 aa13.11□□□□□ -0.31
FARP1-232ENST00000601009 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
FARP1-232ENST00000601009 EVA1CP58658 441 aa13.09□□□□□ -0.31
FARP1-232ENST00000601009 ZC3H6P61129 1189 aaKnown RBP13.09□□□□□ -0.31
FARP1-232ENST00000601009 USP19O94966 1318 aa13.09□□□□□ -0.31
FARP1-232ENST00000601009 CPDO75976 1380 aa13.08□□□□□ -0.31
FARP1-232ENST00000601009 USP6P35125 1406 aa13.08□□□□□ -0.32
FARP1-232ENST00000601009 CHRNA2Q15822 529 aa13.08□□□□□ -0.32
FARP1-232ENST00000601009 STRN4Q9NRL3 753 aa13.08□□□□□ -0.32
FARP1-232ENST00000601009 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
FARP1-232ENST00000601009 TONSLQ96HA7 1378 aa13.07□□□□□ -0.32
FARP1-232ENST00000601009 BAG6P46379 1132 aa13.07□□□□□ -0.32
FARP1-232ENST00000601009 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
FARP1-232ENST00000601009 THSD7AQ9UPZ6 1657 aa13.07□□□□□ -0.32
FARP1-232ENST00000601009 SPATA31A1Q5TZJ5 1347 aa13.07□□□□□ -0.32
FARP1-232ENST00000601009 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
FARP1-232ENST00000601009 GCP02774 474 aa13.06□□□□□ -0.32
FARP1-232ENST00000601009 RGPD1P0DJD0 1748 aa13.05□□□□□ -0.32
FARP1-232ENST00000601009 NLRP6P59044 892 aa13.05□□□□□ -0.32
FARP1-232ENST00000601009 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
FARP1-232ENST00000601009 SBNO2Q9Y2G9 1366 aa13.05□□□□□ -0.32
FARP1-232ENST00000601009 BARGINQ6ZT62 677 aa13.04□□□□□ -0.32
FARP1-232ENST00000601009 THRAP3Q9Y2W1 955 aaKnown RBP13.04□□□□□ -0.32
FARP1-232ENST00000601009 LMO7Q8WWI1 1683 aa13.04□□□□□ -0.32
FARP1-232ENST00000601009 DEFB132Q7Z7B7 95 aa13.03□□□□□ -0.32
FARP1-232ENST00000601009 TCP11L2Q8N4U5 519 aa13.03□□□□□ -0.32
FARP1-232ENST00000601009 USP35Q9P2H5 1018 aa13.03□□□□□ -0.32
FARP1-232ENST00000601009 TTC21AQ8NDW8 1320 aa13.03□□□□□ -0.32
FARP1-232ENST00000601009 SLIT3O75094 1523 aa13.03□□□□□ -0.32
FARP1-232ENST00000601009 CAMTA1Q9Y6Y1 1673 aa13.02□□□□□ -0.32
FARP1-232ENST00000601009 AKAP12Q02952 1782 aa13.02□□□□□ -0.32
FARP1-232ENST00000601009 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.33
FARP1-232ENST00000601009 PDE3BQ13370 1112 aa13.02□□□□□ -0.33
FARP1-232ENST00000601009 FAM196AQ6ZSG2 479 aa13.02□□□□□ -0.33
FARP1-232ENST00000601009 KCNH5Q8NCM2 988 aa13.02□□□□□ -0.33
FARP1-232ENST00000601009 PIK3C2AO00443 1686 aa13.02□□□□□ -0.33
FARP1-232ENST00000601009 ZBTB7CA1YPR0 619 aa13.01□□□□□ -0.33
FARP1-232ENST00000601009 C11orf95C9JLR9 678 aaPredicted RBP13.01□□□□□ -0.33
FARP1-232ENST00000601009 SLC24A1O60721 1099 aa13.01□□□□□ -0.33
FARP1-232ENST00000601009 LARP1Q6PKG0 1096 aaKnown RBP13.01□□□□□ -0.33
FARP1-232ENST00000601009 TTC21BQ7Z4L5 1316 aa13.01□□□□□ -0.33
FARP1-232ENST00000601009 AATKQ6ZMQ8 1374 aa13.01□□□□□ -0.33
FARP1-232ENST00000601009 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
FARP1-232ENST00000601009 COL5A2P05997 1499 aaPredicted RBP13.01□□□□□ -0.33
FARP1-232ENST00000601009 DISP2A7MBM2 1401 aa12.99□□□□□ -0.33
FARP1-232ENST00000601009 CRB1P82279 1406 aa12.99□□□□□ -0.33
FARP1-232ENST00000601009 CPSF1Q10570 1443 aaKnown RBP12.98□□□□□ -0.33
FARP1-232ENST00000601009 FAM182BQ5T319 152 aa12.98□□□□□ -0.33
FARP1-232ENST00000601009 HDGFL2Q7Z4V5 671 aaPredicted RBP12.98□□□□□ -0.33
FARP1-232ENST00000601009 MON2Q7Z3U7 1717 aa12.98□□□□□ -0.33
FARP1-232ENST00000601009 PARD3Q8TEW0 1356 aa12.97□□□□□ -0.33
FARP1-232ENST00000601009 TNS1Q9HBL0 1735 aaKnown RBP12.97□□□□□ -0.33
FARP1-232ENST00000601009 PARP4Q9UKK3 1724 aaKnown RBP12.97□□□□□ -0.33
FARP1-232ENST00000601009 TOM1L2Q6ZVM7 507 aa12.97□□□□□ -0.33
FARP1-232ENST00000601009 ABCC6O95255 1503 aa12.97□□□□□ -0.33
FARP1-232ENST00000601009 TRIM37O94972 964 aa12.96□□□□□ -0.33
FARP1-232ENST00000601009 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
FARP1-232ENST00000601009 TMC1Q8TDI8 760 aa12.96□□□□□ -0.33
FARP1-232ENST00000601009 PUS7Q96PZ0 661 aaKnown RBP12.96□□□□□ -0.33
FARP1-232ENST00000601009 CDCA7Q9BWT1 371 aaPredicted RBP12.96□□□□□ -0.33
FARP1-232ENST00000601009 TERF2IPQ9NYB0 399 aa12.96□□□□□ -0.33
FARP1-232ENST00000601009 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms