RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 USP21Q9UK80 565 aa39.66■■■■□ 3.94
SSBP4-206ENST00000599699 NUTM2GQ5VZR2 741 aa39.64■■■■□ 3.94
SSBP4-206ENST00000599699 TESK2Q96S53 571 aa39.64■■■■□ 3.94
SSBP4-206ENST00000599699 SLC24A1O60721 1099 aa39.63■■■■□ 3.93
SSBP4-206ENST00000599699 FNBP4Q8N3X1 1017 aaPredicted RBP39.63■■■■□ 3.93
SSBP4-206ENST00000599699 QTRT2Q9H974 415 aaKnown RBP39.63■■■■□ 3.93
SSBP4-206ENST00000599699 SOCS7O14512 581 aa39.62■■■■□ 3.93
SSBP4-206ENST00000599699 ABTB2Q8N961 1025 aa39.62■■■■□ 3.93
SSBP4-206ENST00000599699 RXRBP28702 533 aa39.6■■■■□ 3.93
SSBP4-206ENST00000599699 TMC1Q8TDI8 760 aa39.6■■■■□ 3.93
SSBP4-206ENST00000599699 MARF1Q9Y4F3 1742 aaKnown RBP39.6■■■■□ 3.93
SSBP4-206ENST00000599699 USP6P35125 1406 aa39.58■■■■□ 3.93
SSBP4-206ENST00000599699 BRD4O60885 1362 aaPredicted RBP39.58■■■■□ 3.93
SSBP4-206ENST00000599699 ZNF692Q9BU19 519 aaPredicted RBP39.57■■■■□ 3.93
SSBP4-206ENST00000599699 ABCA3Q99758 1704 aa39.57■■■■□ 3.92
SSBP4-206ENST00000599699 PUS7Q96PZ0 661 aaKnown RBP39.54■■■■□ 3.92
SSBP4-206ENST00000599699 TRPC5Q9UL62 973 aaPredicted RBP39.54■■■■□ 3.92
SSBP4-206ENST00000599699 TMF1P82094 1093 aa39.53■■■■□ 3.92
SSBP4-206ENST00000599699 KTN1Q86UP2 1357 aaKnown RBP39.5■■■■□ 3.91
SSBP4-206ENST00000599699 RBM6P78332 1123 aaKnown RBP39.5■■■■□ 3.91
SSBP4-206ENST00000599699 NLRP13Q86W25 1043 aa39.5■■■■□ 3.91
SSBP4-206ENST00000599699 SLC12A5Q9H2X9 1139 aa39.5■■■■□ 3.91
SSBP4-206ENST00000599699 BCL9LQ86UU0 1499 aa39.49■■■■□ 3.91
SSBP4-206ENST00000599699 FAM83GA6ND36 823 aa39.49■■■■□ 3.91
SSBP4-206ENST00000599699 HDGFL2Q7Z4V5 671 aaPredicted RBP39.47■■■■□ 3.91
SSBP4-206ENST00000599699 UNC5CLQ8IV45 518 aa39.47■■■■□ 3.91
SSBP4-206ENST00000599699 CPSF1Q10570 1443 aaKnown RBP39.47■■■■□ 3.91
SSBP4-206ENST00000599699 SLIT2O94813 1529 aa39.46■■■■□ 3.91
SSBP4-206ENST00000599699 TTC21BQ7Z4L5 1316 aa39.45■■■■□ 3.91
SSBP4-206ENST00000599699 NLRP6P59044 892 aa39.45■■■■□ 3.91
SSBP4-206ENST00000599699 PRDM11Q9NQV5 511 aa39.45■■■■□ 3.91
SSBP4-206ENST00000599699 ATRNO75882 1429 aa39.44■■■■□ 3.9
SSBP4-206ENST00000599699 SSH2Q76I76 1423 aa39.44■■■■□ 3.9
SSBP4-206ENST00000599699 TERF2IPQ9NYB0 399 aa39.44■■■■□ 3.9
SSBP4-206ENST00000599699 CRYBG1Q9Y4K1 1723 aa39.43■■■■□ 3.9
SSBP4-206ENST00000599699 AKAP12Q02952 1782 aa39.43■■■■□ 3.9
SSBP4-206ENST00000599699 ZC3H6P61129 1189 aaKnown RBP39.42■■■■□ 3.9
SSBP4-206ENST00000599699 CDCA8Q53HL2 280 aa39.41■■■■□ 3.9
SSBP4-206ENST00000599699 USP19O94966 1318 aa39.4■■■■□ 3.9
SSBP4-206ENST00000599699 PHRF1Q9P1Y6 1649 aaKnown RBP39.4■■■■□ 3.9
SSBP4-206ENST00000599699 TTC21AQ8NDW8 1320 aa39.4■■■■□ 3.9
SSBP4-206ENST00000599699 KIAA0232Q92628 1395 aa39.39■■■■□ 3.9
SSBP4-206ENST00000599699 EIF4G2P78344 907 aaKnown RBP eCLIP39.39■■■■□ 3.9
SSBP4-206ENST00000599699 BTG4Q9NY30 223 aa39.39■■■■□ 3.9
SSBP4-206ENST00000599699 NINLQ9Y2I6 1382 aa39.38■■■■□ 3.89
SSBP4-206ENST00000599699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP39.38■■■■□ 3.89
SSBP4-206ENST00000599699 PLCH1Q4KWH8 1693 aa39.38■■■■□ 3.89
SSBP4-206ENST00000599699 CD163L1Q9NR16 1453 aa39.37■■■■□ 3.89
SSBP4-206ENST00000599699 GCP02774 474 aa39.36■■■■□ 3.89
SSBP4-206ENST00000599699 CHRNA2Q15822 529 aa39.36■■■■□ 3.89
SSBP4-206ENST00000599699 GJD4Q96KN9 370 aaPredicted RBP39.36■■■■□ 3.89
SSBP4-206ENST00000599699 CDK12Q9NYV4 1490 aaPredicted RBP39.36■■■■□ 3.89
SSBP4-206ENST00000599699 CCDC9Q9Y3X0 531 aaKnown RBP39.35■■■■□ 3.89
SSBP4-206ENST00000599699 A0A1W2PP64 1363 aa39.34■■■■□ 3.89
SSBP4-206ENST00000599699 COL14A1Q05707 1796 aaKnown RBP39.34■■■■□ 3.89
SSBP4-206ENST00000599699 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.34■■■■□ 3.89
SSBP4-206ENST00000599699 HSPA5P11021 654 aaKnown RBP39.33■■■■□ 3.89
SSBP4-206ENST00000599699 NWD2Q9ULI1 1742 aa39.33■■■■□ 3.89
SSBP4-206ENST00000599699 PIK3C2AO00443 1686 aa39.32■■■■□ 3.89
SSBP4-206ENST00000599699 MON2Q7Z3U7 1717 aa39.32■■■■□ 3.89
SSBP4-206ENST00000599699 NRKQ7Z2Y5 1582 aa39.31■■■■□ 3.88
SSBP4-206ENST00000599699 VPS72Q15906 364 aa39.31■■■■□ 3.88
SSBP4-206ENST00000599699 RGS12O14924 1447 aa39.3■■■■□ 3.88
SSBP4-206ENST00000599699 ZBTB7CA1YPR0 619 aa39.29■■■■□ 3.88
SSBP4-206ENST00000599699 EDC4Q6P2E9 1401 aaKnown RBP39.29■■■■□ 3.88
SSBP4-206ENST00000599699 CPDO75976 1380 aa39.26■■■■□ 3.88
SSBP4-206ENST00000599699 NME9Q86XW9 330 aa39.26■■■■□ 3.88
SSBP4-206ENST00000599699 SOX12O15370 315 aa39.25■■■■□ 3.87
SSBP4-206ENST00000599699 SLIT3O75094 1523 aa39.24■■■■□ 3.87
SSBP4-206ENST00000599699 POLR3GLQ9BT43 218 aa39.23■■■■□ 3.87
SSBP4-206ENST00000599699 ZRANB1Q9UGI0 708 aa39.23■■■■□ 3.87
SSBP4-206ENST00000599699 ANKRD36BQ8N2N9 1353 aa39.22■■■■□ 3.87
SSBP4-206ENST00000599699 KCNH5Q8NCM2 988 aa39.22■■■■□ 3.87
SSBP4-206ENST00000599699 STRN4Q9NRL3 753 aa39.22■■■■□ 3.87
SSBP4-206ENST00000599699 EVA1CP58658 441 aa39.2■■■■□ 3.87
SSBP4-206ENST00000599699 NRAPQ86VF7 1730 aa39.2■■■■□ 3.87
SSBP4-206ENST00000599699 GLI3P10071 1580 aa39.18■■■■□ 3.86
SSBP4-206ENST00000599699 USP31Q70CQ4 1352 aa39.18■■■■□ 3.86
SSBP4-206ENST00000599699 SPATA31A5Q5VU36 1347 aa39.12■■■■□ 3.85
SSBP4-206ENST00000599699 SPATA31A7Q8IWB4 1347 aa39.12■■■■□ 3.85
SSBP4-206ENST00000599699 CAMTA1Q9Y6Y1 1673 aa39.11■■■■□ 3.85
SSBP4-206ENST00000599699 A0A0G2JS52 829 aa39.11■■■■□ 3.85
SSBP4-206ENST00000599699 MYT1Q01538 1121 aa39.11■■■■□ 3.85
SSBP4-206ENST00000599699 AATKQ6ZMQ8 1374 aa39.1■■■■□ 3.85
SSBP4-206ENST00000599699 ARHGEF25Q86VW2 580 aa39.1■■■■□ 3.85
SSBP4-206ENST00000599699 FAM98CQ17RN3 349 aaKnown RBP39.09■■■■□ 3.85
SSBP4-206ENST00000599699 SEPT12Q8IYM1 358 aa39.09■■■■□ 3.85
SSBP4-206ENST00000599699 LMO7Q8WWI1 1683 aa39.07■■■■□ 3.85
SSBP4-206ENST00000599699 COG3Q96JB2 828 aa39.07■■■■□ 3.85
SSBP4-206ENST00000599699 NFAT5O94916 1531 aa39.05■■■■□ 3.84
SSBP4-206ENST00000599699 LARP1Q6PKG0 1096 aaKnown RBP39.05■■■■□ 3.84
SSBP4-206ENST00000599699 USP35Q9P2H5 1018 aa39.05■■■■□ 3.84
SSBP4-206ENST00000599699 MYOM1P52179 1685 aa39.04■■■■□ 3.84
SSBP4-206ENST00000599699 ONECUT3O60422 494 aaPredicted RBP39.04■■■■□ 3.84
SSBP4-206ENST00000599699 SPATA31A1Q5TZJ5 1347 aa39.04■■■■□ 3.84
SSBP4-206ENST00000599699 OVOS2A0A0J9YW53 1432 aa39.04■■■■□ 3.84
SSBP4-206ENST00000599699 OVOS2Q6IE36 1432 aa39.04■■■■□ 3.84
SSBP4-206ENST00000599699 USP54Q70EL1 1684 aa39.03■■■■□ 3.84
SSBP4-206ENST00000599699 COL5A2P05997 1499 aaPredicted RBP39.01■■■■□ 3.84
SSBP4-206ENST00000599699 UPF1Q92900 1129 aaKnown RBP eCLIP39■■■■□ 3.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms