RNA–Protein interactions for RNA: ENST00000599310.5

SMIM7-217, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,123 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-217ENST00000599310 CABP2Q9NPB3 220 aa23.33■■□□□ 1.33
SMIM7-217ENST00000599310 PPIP5K1Q6PFW1 1433 aa23.33■■□□□ 1.32
SMIM7-217ENST00000599310 ALS2Q96Q42 1657 aa23.32■■□□□ 1.32
SMIM7-217ENST00000599310 BCL9LQ86UU0 1499 aa23.31■■□□□ 1.32
SMIM7-217ENST00000599310 UNC5CLQ8IV45 518 aa23.3■■□□□ 1.32
SMIM7-217ENST00000599310 CLSPNQ9HAW4 1339 aa23.3■■□□□ 1.32
SMIM7-217ENST00000599310 BRD4O60885 1362 aaPredicted RBP23.29■■□□□ 1.32
SMIM7-217ENST00000599310 ABCA3Q99758 1704 aa23.29■■□□□ 1.32
SMIM7-217ENST00000599310 EP400Q96L91 3159 aa23.29■■□□□ 1.32
SMIM7-217ENST00000599310 SLIT2O94813 1529 aa23.28■■□□□ 1.32
SMIM7-217ENST00000599310 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.28■■□□□ 1.32
SMIM7-217ENST00000599310 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
SMIM7-217ENST00000599310 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.31
SMIM7-217ENST00000599310 ATAD2Q6PL18 1390 aa23.26■■□□□ 1.31
SMIM7-217ENST00000599310 GJD4Q96KN9 370 aaPredicted RBP23.25■■□□□ 1.31
SMIM7-217ENST00000599310 CABP1Q9NZU7 370 aa23.25■■□□□ 1.31
SMIM7-217ENST00000599310 TIMELESSQ9UNS1 1208 aa23.25■■□□□ 1.31
SMIM7-217ENST00000599310 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
SMIM7-217ENST00000599310 NWD2Q9ULI1 1742 aa23.23■■□□□ 1.31
SMIM7-217ENST00000599310 ABTB2Q8N961 1025 aa23.23■■□□□ 1.31
SMIM7-217ENST00000599310 ZNF692Q9BU19 519 aaPredicted RBP23.22■■□□□ 1.31
SMIM7-217ENST00000599310 FAM83GA6ND36 823 aa23.21■■□□□ 1.31
SMIM7-217ENST00000599310 NLRP13Q86W25 1043 aa23.21■■□□□ 1.31
SMIM7-217ENST00000599310 PRDM11Q9NQV5 511 aa23.21■■□□□ 1.31
SMIM7-217ENST00000599310 CCDC9Q9Y3X0 531 aaKnown RBP23.21■■□□□ 1.31
SMIM7-217ENST00000599310 PLCH1Q4KWH8 1693 aa23.21■■□□□ 1.31
SMIM7-217ENST00000599310 COL14A1Q05707 1796 aaKnown RBP23.2■■□□□ 1.3
SMIM7-217ENST00000599310 VPS72Q15906 364 aa23.2■■□□□ 1.3
SMIM7-217ENST00000599310 GLI3P10071 1580 aa23.19■■□□□ 1.3
SMIM7-217ENST00000599310 USP6P35125 1406 aa23.19■■□□□ 1.3
SMIM7-217ENST00000599310 NUTM2GQ5VZR2 741 aa23.18■■□□□ 1.3
SMIM7-217ENST00000599310 CRYBG1Q9Y4K1 1723 aa23.18■■□□□ 1.3
SMIM7-217ENST00000599310 BTG4Q9NY30 223 aa23.17■■□□□ 1.3
SMIM7-217ENST00000599310 PHRF1Q9P1Y6 1649 aaKnown RBP23.16■■□□□ 1.3
SMIM7-217ENST00000599310 SRCAPQ6ZRS2 3230 aa23.15■■□□□ 1.3
SMIM7-217ENST00000599310 BRWD3Q6RI45 1802 aa23.15■■□□□ 1.3
SMIM7-217ENST00000599310 PUS7Q96PZ0 661 aaKnown RBP23.14■■□□□ 1.29
SMIM7-217ENST00000599310 KIAA0232Q92628 1395 aa23.14■■□□□ 1.29
SMIM7-217ENST00000599310 USP19O94966 1318 aa23.13■■□□□ 1.29
SMIM7-217ENST00000599310 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
SMIM7-217ENST00000599310 NLRP6P59044 892 aa23.12■■□□□ 1.29
SMIM7-217ENST00000599310 ZC3H6P61129 1189 aaKnown RBP23.12■■□□□ 1.29
SMIM7-217ENST00000599310 TTC21AQ8NDW8 1320 aa23.11■■□□□ 1.29
SMIM7-217ENST00000599310 KTN1Q86UP2 1357 aaKnown RBP23.11■■□□□ 1.29
SMIM7-217ENST00000599310 ST20-MTHFSA0A0A6YYL1 179 aa23.1■■□□□ 1.29
SMIM7-217ENST00000599310 GCP02774 474 aa23.1■■□□□ 1.29
SMIM7-217ENST00000599310 HDGFL2Q7Z4V5 671 aaPredicted RBP23.1■■□□□ 1.29
SMIM7-217ENST00000599310 TMC1Q8TDI8 760 aa23.1■■□□□ 1.29
SMIM7-217ENST00000599310 NRAPQ86VF7 1730 aa23.1■■□□□ 1.29
SMIM7-217ENST00000599310 CPSF1Q10570 1443 aaKnown RBP23.09■■□□□ 1.29
SMIM7-217ENST00000599310 CPDO75976 1380 aa23.09■■□□□ 1.29
SMIM7-217ENST00000599310 NRKQ7Z2Y5 1582 aa23.09■■□□□ 1.29
SMIM7-217ENST00000599310 TTC21BQ7Z4L5 1316 aa23.08■■□□□ 1.29
SMIM7-217ENST00000599310 SSH2Q76I76 1423 aa23.08■■□□□ 1.29
SMIM7-217ENST00000599310 A0A0G2JS52 829 aa23.08■■□□□ 1.29
SMIM7-217ENST00000599310 MYT1Q01538 1121 aa23.08■■□□□ 1.29
SMIM7-217ENST00000599310 CHRNA2Q15822 529 aa23.08■■□□□ 1.29
SMIM7-217ENST00000599310 TERF2IPQ9NYB0 399 aa23.08■■□□□ 1.29
SMIM7-217ENST00000599310 AKAP12Q02952 1782 aa23.08■■□□□ 1.29
SMIM7-217ENST00000599310 USP47Q96K76 1375 aa23.07■■□□□ 1.28
SMIM7-217ENST00000599310 NINLQ9Y2I6 1382 aa23.07■■□□□ 1.28
SMIM7-217ENST00000599310 EVA1CP58658 441 aa23.07■■□□□ 1.28
SMIM7-217ENST00000599310 SEPT12Q8IYM1 358 aa23.07■■□□□ 1.28
SMIM7-217ENST00000599310 ONECUT3O60422 494 aaPredicted RBP23.06■■□□□ 1.28
SMIM7-217ENST00000599310 KCNH5Q8NCM2 988 aa23.05■■□□□ 1.28
SMIM7-217ENST00000599310 TESK2Q96S53 571 aa23.05■■□□□ 1.28
SMIM7-217ENST00000599310 SPATA31A5Q5VU36 1347 aa23.05■■□□□ 1.28
SMIM7-217ENST00000599310 SPATA31A7Q8IWB4 1347 aa23.05■■□□□ 1.28
SMIM7-217ENST00000599310 TMF1P82094 1093 aa23.04■■□□□ 1.28
SMIM7-217ENST00000599310 STRN4Q9NRL3 753 aa23.04■■□□□ 1.28
SMIM7-217ENST00000599310 SLIT3O75094 1523 aa23.03■■□□□ 1.28
SMIM7-217ENST00000599310 CDCA8Q53HL2 280 aa23.03■■□□□ 1.28
SMIM7-217ENST00000599310 CCDC125Q86Z20 511 aa23.03■■□□□ 1.28
SMIM7-217ENST00000599310 PIK3C2AO00443 1686 aa23.03■■□□□ 1.28
SMIM7-217ENST00000599310 FAM98CQ17RN3 349 aaKnown RBP23.02■■□□□ 1.28
SMIM7-217ENST00000599310 MON2Q7Z3U7 1717 aa23.02■■□□□ 1.28
SMIM7-217ENST00000599310 ZBTB7CA1YPR0 619 aa23.01■■□□□ 1.27
SMIM7-217ENST00000599310 SLC12A5Q9H2X9 1139 aa23.01■■□□□ 1.27
SMIM7-217ENST00000599310 KRT27Q7Z3Y8 459 aa23■■□□□ 1.27
SMIM7-217ENST00000599310 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.99■■□□□ 1.27
SMIM7-217ENST00000599310 SPATA31A1Q5TZJ5 1347 aa22.99■■□□□ 1.27
SMIM7-217ENST00000599310 EDC4Q6P2E9 1401 aaKnown RBP22.99■■□□□ 1.27
SMIM7-217ENST00000599310 AATKQ6ZMQ8 1374 aa22.98■■□□□ 1.27
SMIM7-217ENST00000599310 CD163L1Q9NR16 1453 aa22.97■■□□□ 1.27
SMIM7-217ENST00000599310 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
SMIM7-217ENST00000599310 CAMTA1Q9Y6Y1 1673 aa22.97■■□□□ 1.27
SMIM7-217ENST00000599310 A0A1W2PP64 1363 aa22.96■■□□□ 1.27
SMIM7-217ENST00000599310 BLMP54132 1417 aaPredicted RBP22.96■■□□□ 1.27
SMIM7-217ENST00000599310 SF3B2Q13435 895 aaKnown RBP22.95■■□□□ 1.26
SMIM7-217ENST00000599310 USP31Q70CQ4 1352 aa22.95■■□□□ 1.26
SMIM7-217ENST00000599310 THRAP3Q9Y2W1 955 aaKnown RBP22.94■■□□□ 1.26
SMIM7-217ENST00000599310 COL5A2P05997 1499 aaPredicted RBP22.93■■□□□ 1.26
SMIM7-217ENST00000599310 SOX12O15370 315 aa22.93■■□□□ 1.26
SMIM7-217ENST00000599310 BARGINQ6ZT62 677 aa22.93■■□□□ 1.26
SMIM7-217ENST00000599310 USP35Q9P2H5 1018 aa22.93■■□□□ 1.26
SMIM7-217ENST00000599310 LARP1Q6PKG0 1096 aaKnown RBP22.92■■□□□ 1.26
SMIM7-217ENST00000599310 ARHGEF25Q86VW2 580 aa22.92■■□□□ 1.26
SMIM7-217ENST00000599310 NME9Q86XW9 330 aa22.92■■□□□ 1.26
SMIM7-217ENST00000599310 TCP11L2Q8N4U5 519 aa22.92■■□□□ 1.26
SMIM7-217ENST00000599310 CRB1P82279 1406 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms