RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 BAP1Q92560 729 aa13.55□□□□□ -0.24
LINC00343-208ENST00000599264 CTC1Q2NKJ3 1217 aa13.54□□□□□ -0.24
LINC00343-208ENST00000599264 LINC01559Q495D7 138 aa13.54□□□□□ -0.24
LINC00343-208ENST00000599264 ZNF511Q8NB15 262 aa13.54□□□□□ -0.24
LINC00343-208ENST00000599264 F12P00748 615 aaPredicted RBP13.53□□□□□ -0.24
LINC00343-208ENST00000599264 SMPD1P17405 629 aa13.52□□□□□ -0.25
LINC00343-208ENST00000599264 ZNF787Q6DD87 383 aa13.52□□□□□ -0.25
LINC00343-208ENST00000599264 CRIPAKQ8N1N5 446 aa13.52□□□□□ -0.25
LINC00343-208ENST00000599264 ARMC2Q8NEN0 867 aa13.52□□□□□ -0.25
LINC00343-208ENST00000599264 MAP10Q9P2G4 905 aa13.52□□□□□ -0.25
LINC00343-208ENST00000599264 PLEKHG3A1L390 1219 aa13.51□□□□□ -0.25
LINC00343-208ENST00000599264 AXIN1O15169 862 aa13.51□□□□□ -0.25
LINC00343-208ENST00000599264 PER1O15534 1290 aaPredicted RBP13.51□□□□□ -0.25
LINC00343-208ENST00000599264 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
LINC00343-208ENST00000599264 AAASQ9NRG9 546 aa13.51□□□□□ -0.25
LINC00343-208ENST00000599264 J3QL48 77 aa13.5□□□□□ -0.25
LINC00343-208ENST00000599264 ALDH1A1P00352 501 aa13.5□□□□□ -0.25
LINC00343-208ENST00000599264 VARSP26640 1264 aaKnown RBP13.49□□□□□ -0.25
LINC00343-208ENST00000599264 ST8SIA5O15466 376 aa13.48□□□□□ -0.25
LINC00343-208ENST00000599264 SIAH2O43255 324 aa13.48□□□□□ -0.25
LINC00343-208ENST00000599264 SMCPP49901 116 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-208ENST00000599264 PROCA1Q8NCQ7 364 aaPredicted RBP13.48□□□□□ -0.25
LINC00343-208ENST00000599264 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00343-208ENST00000599264 WASF2Q9Y6W5 498 aa13.47□□□□□ -0.25
LINC00343-208ENST00000599264 PPP2R2DQ66LE6 453 aa13.46□□□□□ -0.25
LINC00343-208ENST00000599264 GOPCQ9HD26 462 aa13.46□□□□□ -0.25
LINC00343-208ENST00000599264 AGERQ15109 404 aa13.45□□□□□ -0.26
LINC00343-208ENST00000599264 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
LINC00343-208ENST00000599264 FAM174AQ8TBP5 190 aa13.44□□□□□ -0.26
LINC00343-208ENST00000599264 PCMTD1Q96MG8 357 aaPredicted RBP13.44□□□□□ -0.26
LINC00343-208ENST00000599264 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
LINC00343-208ENST00000599264 BPHLQ86WA6 291 aaPredicted RBP13.43□□□□□ -0.26
LINC00343-208ENST00000599264 MPNDQ8N594 471 aa13.42□□□□□ -0.26
LINC00343-208ENST00000599264 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
LINC00343-208ENST00000599264 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
LINC00343-208ENST00000599264 HPS1Q92902 700 aa13.41□□□□□ -0.26
LINC00343-208ENST00000599264 AP1G2O75843 785 aa13.39□□□□□ -0.27
LINC00343-208ENST00000599264 GPKOWQ92917 476 aaPredicted RBP eCLIP13.39□□□□□ -0.27
LINC00343-208ENST00000599264 FOXJ1Q92949 421 aa13.39□□□□□ -0.27
LINC00343-208ENST00000599264 TLL2Q9Y6L7 1015 aa13.37□□□□□ -0.27
LINC00343-208ENST00000599264 PNMA1Q8ND90 353 aa13.35□□□□□ -0.27
LINC00343-208ENST00000599264 LRRN4Q8WUT4 740 aa13.35□□□□□ -0.27
LINC00343-208ENST00000599264 DACH1Q9UI36 760 aa13.34□□□□□ -0.27
LINC00343-208ENST00000599264 RFC5P40937 340 aa13.33□□□□□ -0.28
LINC00343-208ENST00000599264 ARID5BQ14865 1188 aa13.33□□□□□ -0.28
LINC00343-208ENST00000599264 FBXO31Q5XUX0 539 aaPredicted RBP13.33□□□□□ -0.28
LINC00343-208ENST00000599264 POTECB2RU33 542 aa13.32□□□□□ -0.28
LINC00343-208ENST00000599264 TMEM259Q4ZIN3 620 aa13.32□□□□□ -0.28
LINC00343-208ENST00000599264 CDK15Q96Q40 435 aa13.32□□□□□ -0.28
LINC00343-208ENST00000599264 ATP13A2Q9NQ11 1180 aa13.32□□□□□ -0.28
LINC00343-208ENST00000599264 FKBPLQ9UIM3 349 aa13.32□□□□□ -0.28
LINC00343-208ENST00000599264 ZC3H4Q9UPT8 1303 aaKnown RBP13.32□□□□□ -0.28
LINC00343-208ENST00000599264 CAPN5O15484 640 aaPredicted RBP13.31□□□□□ -0.28
LINC00343-208ENST00000599264 ADH1CP00326 375 aa13.31□□□□□ -0.28
LINC00343-208ENST00000599264 SENP2Q9HC62 589 aa13.31□□□□□ -0.28
LINC00343-208ENST00000599264 GMPR2Q9P2T1 348 aaKnown RBP13.31□□□□□ -0.28
LINC00343-208ENST00000599264 MAGEB6P1A0A0J9YX57 407 aa13.3□□□□□ -0.28
LINC00343-208ENST00000599264 C11orf95C9JLR9 678 aaPredicted RBP13.3□□□□□ -0.28
LINC00343-208ENST00000599264 NNTQ13423 1086 aa13.3□□□□□ -0.28
LINC00343-208ENST00000599264 C4orf48Q5BLP8 95 aa13.3□□□□□ -0.28
LINC00343-208ENST00000599264 PDXDC2PQ6P474 469 aa13.3□□□□□ -0.28
LINC00343-208ENST00000599264 SH3BP5LQ7L8J4 393 aa13.3□□□□□ -0.28
LINC00343-208ENST00000599264 SH3RF1Q7Z6J0 888 aa13.3□□□□□ -0.28
LINC00343-208ENST00000599264 USP17L8P0C7I0 530 aa13.29□□□□□ -0.28
LINC00343-208ENST00000599264 NR6A1Q15406 480 aa13.29□□□□□ -0.28
LINC00343-208ENST00000599264 NR5A1Q13285 461 aa13.28□□□□□ -0.28
LINC00343-208ENST00000599264 KIFC2Q96AC6 838 aa13.27□□□□□ -0.29
LINC00343-208ENST00000599264 C1QTNF2Q9BXJ5 285 aa13.27□□□□□ -0.29
LINC00343-208ENST00000599264 ARHGAP9Q9BRR9 750 aa13.26□□□□□ -0.29
LINC00343-208ENST00000599264 CARD14Q9BXL6 1004 aa13.26□□□□□ -0.29
LINC00343-208ENST00000599264 PTK2Q05397 1052 aa13.25□□□□□ -0.29
LINC00343-208ENST00000599264 TRMT44Q8IYL2 757 aaKnown RBP13.25□□□□□ -0.29
LINC00343-208ENST00000599264 MAP4K5Q9Y4K4 846 aa13.25□□□□□ -0.29
LINC00343-208ENST00000599264 WDR4P57081 412 aaKnown RBP13.24□□□□□ -0.29
LINC00343-208ENST00000599264 VASH1Q7L8A9 365 aaPredicted RBP13.24□□□□□ -0.29
LINC00343-208ENST00000599264 GPSM3Q9Y4H4 160 aa13.24□□□□□ -0.29
LINC00343-208ENST00000599264 ZBTB33Q86T24 672 aa13.23□□□□□ -0.29
LINC00343-208ENST00000599264 ZNF775Q96BV0 537 aaPredicted RBP13.23□□□□□ -0.29
LINC00343-208ENST00000599264 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
LINC00343-208ENST00000599264 CDV3Q9UKY7 258 aaKnown RBP13.22□□□□□ -0.29
LINC00343-208ENST00000599264 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
LINC00343-208ENST00000599264 NISCHQ9Y2I1 1504 aa13.21□□□□□ -0.29
LINC00343-208ENST00000599264 GRM5P41594 1212 aa13.2□□□□□ -0.3
LINC00343-208ENST00000599264 SLC10A4Q96EP9 437 aa13.2□□□□□ -0.3
LINC00343-208ENST00000599264 HMX1Q9NP08 348 aaPredicted RBP13.2□□□□□ -0.3
LINC00343-208ENST00000599264 TIMP2P16035 220 aa13.19□□□□□ -0.3
LINC00343-208ENST00000599264 FSHRP23945 695 aa13.18□□□□□ -0.3
LINC00343-208ENST00000599264 SCARF1Q14162 830 aa13.17□□□□□ -0.3
LINC00343-208ENST00000599264 EPS8L1Q8TE68 723 aa13.17□□□□□ -0.3
LINC00343-208ENST00000599264 ZIC2O95409 532 aaPredicted RBP13.16□□□□□ -0.3
LINC00343-208ENST00000599264 BMP1P13497 986 aa13.16□□□□□ -0.3
LINC00343-208ENST00000599264 BANK1Q8NDB2 785 aa13.16□□□□□ -0.3
LINC00343-208ENST00000599264 KLF16Q9BXK1 252 aaPredicted RBP13.16□□□□□ -0.3
LINC00343-208ENST00000599264 NR3C2P08235 984 aa13.15□□□□□ -0.3
LINC00343-208ENST00000599264 TRIM46Q7Z4K8 759 aa13.15□□□□□ -0.3
LINC00343-208ENST00000599264 EMILIN1Q9Y6C2 1016 aa13.15□□□□□ -0.3
LINC00343-208ENST00000599264 SNRPBP14678 240 aaKnown RBP13.14□□□□□ -0.31
LINC00343-208ENST00000599264 MRPL14Q6P1L8 145 aaKnown RBP13.14□□□□□ -0.31
LINC00343-208ENST00000599264 CCDC116Q8IYX3 515 aa13.14□□□□□ -0.31
LINC00343-208ENST00000599264 APBB1O00213 710 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms