RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 C8orf37Q96NL8 207 aa19.05■□□□□ 0.64
SOX2-OT-229ENST00000598474 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
SOX2-OT-229ENST00000598474 HSPA5P11021 654 aaKnown RBP19.04■□□□□ 0.64
SOX2-OT-229ENST00000598474 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.64
SOX2-OT-229ENST00000598474 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
SOX2-OT-229ENST00000598474 TMC1Q8TDI8 760 aa19.03■□□□□ 0.64
SOX2-OT-229ENST00000598474 BRD4O60885 1362 aaPredicted RBP19.03■□□□□ 0.64
SOX2-OT-229ENST00000598474 NUTM2GQ5VZR2 741 aa19.02■□□□□ 0.64
SOX2-OT-229ENST00000598474 ILDR2Q71H61 639 aa19.02■□□□□ 0.64
SOX2-OT-229ENST00000598474 AFF2P51816 1311 aa19.01■□□□□ 0.63
SOX2-OT-229ENST00000598474 ABCA3Q99758 1704 aa19.01■□□□□ 0.63
SOX2-OT-229ENST00000598474 POTEAQ6S8J7 498 aa19.01■□□□□ 0.63
SOX2-OT-229ENST00000598474 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
SOX2-OT-229ENST00000598474 HAP1P54257 671 aaPredicted RBP19■□□□□ 0.63
SOX2-OT-229ENST00000598474 ABTB2Q8N961 1025 aa19■□□□□ 0.63
SOX2-OT-229ENST00000598474 KTN1Q86UP2 1357 aaKnown RBP19■□□□□ 0.63
SOX2-OT-229ENST00000598474 NINLQ9Y2I6 1382 aa19■□□□□ 0.63
SOX2-OT-229ENST00000598474 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
SOX2-OT-229ENST00000598474 A0A1W2PP64 1363 aa18.99■□□□□ 0.63
SOX2-OT-229ENST00000598474 NGLY1Q96IV0 654 aa18.99■□□□□ 0.63
SOX2-OT-229ENST00000598474 CRYBG1Q9Y4K1 1723 aa18.99■□□□□ 0.63
SOX2-OT-229ENST00000598474 TTC21BQ7Z4L5 1316 aa18.99■□□□□ 0.63
SOX2-OT-229ENST00000598474 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
SOX2-OT-229ENST00000598474 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
SOX2-OT-229ENST00000598474 ZNF772Q68DY9 489 aaPredicted RBP18.97■□□□□ 0.63
SOX2-OT-229ENST00000598474 HDGFL2Q7Z4V5 671 aaPredicted RBP18.97■□□□□ 0.63
SOX2-OT-229ENST00000598474 FNBP4Q8N3X1 1017 aaPredicted RBP18.97■□□□□ 0.63
SOX2-OT-229ENST00000598474 USP19O94966 1318 aa18.97■□□□□ 0.63
SOX2-OT-229ENST00000598474 TERF2IPQ9NYB0 399 aa18.96■□□□□ 0.63
SOX2-OT-229ENST00000598474 MON2Q7Z3U7 1717 aa18.96■□□□□ 0.63
SOX2-OT-229ENST00000598474 PIK3C2AO00443 1686 aa18.95■□□□□ 0.62
SOX2-OT-229ENST00000598474 PHRF1Q9P1Y6 1649 aaKnown RBP18.95■□□□□ 0.62
SOX2-OT-229ENST00000598474 TTC21AQ8NDW8 1320 aa18.95■□□□□ 0.62
SOX2-OT-229ENST00000598474 MARF1Q9Y4F3 1742 aaKnown RBP18.94■□□□□ 0.62
SOX2-OT-229ENST00000598474 EDC4Q6P2E9 1401 aaKnown RBP18.94■□□□□ 0.62
SOX2-OT-229ENST00000598474 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
SOX2-OT-229ENST00000598474 BCL9LQ86UU0 1499 aa18.94■□□□□ 0.62
SOX2-OT-229ENST00000598474 SLIT2O94813 1529 aa18.94■□□□□ 0.62
SOX2-OT-229ENST00000598474 ANKRD36BQ8N2N9 1353 aa18.93■□□□□ 0.62
SOX2-OT-229ENST00000598474 FAM83GA6ND36 823 aa18.93■□□□□ 0.62
SOX2-OT-229ENST00000598474 NLRP6P59044 892 aa18.93■□□□□ 0.62
SOX2-OT-229ENST00000598474 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.93■□□□□ 0.62
SOX2-OT-229ENST00000598474 USP21Q9UK80 565 aa18.93■□□□□ 0.62
SOX2-OT-229ENST00000598474 MYOM1P52179 1685 aa18.92■□□□□ 0.62
SOX2-OT-229ENST00000598474 SLIT3O75094 1523 aa18.91■□□□□ 0.62
SOX2-OT-229ENST00000598474 C11orf95C9JLR9 678 aaPredicted RBP18.91■□□□□ 0.62
SOX2-OT-229ENST00000598474 KIAA0232Q92628 1395 aa18.91■□□□□ 0.62
SOX2-OT-229ENST00000598474 GCP02774 474 aa18.9■□□□□ 0.62
SOX2-OT-229ENST00000598474 NME9Q86XW9 330 aa18.9■□□□□ 0.62
SOX2-OT-229ENST00000598474 QTRT2Q9H974 415 aaKnown RBP18.9■□□□□ 0.62
SOX2-OT-229ENST00000598474 ZRANB1Q9UGI0 708 aa18.9■□□□□ 0.62
SOX2-OT-229ENST00000598474 ZC3H6P61129 1189 aaKnown RBP18.89■□□□□ 0.61
SOX2-OT-229ENST00000598474 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
SOX2-OT-229ENST00000598474 PRDM11Q9NQV5 511 aa18.89■□□□□ 0.61
SOX2-OT-229ENST00000598474 ATRNO75882 1429 aa18.89■□□□□ 0.61
SOX2-OT-229ENST00000598474 CPDO75976 1380 aa18.88■□□□□ 0.61
SOX2-OT-229ENST00000598474 USP31Q70CQ4 1352 aa18.88■□□□□ 0.61
SOX2-OT-229ENST00000598474 PLCH1Q4KWH8 1693 aa18.88■□□□□ 0.61
SOX2-OT-229ENST00000598474 CHRNA2Q15822 529 aa18.87■□□□□ 0.61
SOX2-OT-229ENST00000598474 UNC5CLQ8IV45 518 aa18.87■□□□□ 0.61
SOX2-OT-229ENST00000598474 TRPC5Q9UL62 973 aaPredicted RBP18.87■□□□□ 0.61
SOX2-OT-229ENST00000598474 COL14A1Q05707 1796 aaKnown RBP18.86■□□□□ 0.61
SOX2-OT-229ENST00000598474 OVOS2A0A0J9YW53 1432 aa18.85■□□□□ 0.61
SOX2-OT-229ENST00000598474 OVOS2Q6IE36 1432 aa18.85■□□□□ 0.61
SOX2-OT-229ENST00000598474 RXRBP28702 533 aa18.85■□□□□ 0.61
SOX2-OT-229ENST00000598474 CARD14Q9BXL6 1004 aa18.85■□□□□ 0.61
SOX2-OT-229ENST00000598474 BTG4Q9NY30 223 aa18.85■□□□□ 0.61
SOX2-OT-229ENST00000598474 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.85■□□□□ 0.61
SOX2-OT-229ENST00000598474 NWD2Q9ULI1 1742 aa18.84■□□□□ 0.61
SOX2-OT-229ENST00000598474 USP54Q70EL1 1684 aa18.84■□□□□ 0.61
SOX2-OT-229ENST00000598474 NFAT5O94916 1531 aa18.84■□□□□ 0.61
SOX2-OT-229ENST00000598474 KIF7Q2M1P5 1343 aa18.83■□□□□ 0.61
SOX2-OT-229ENST00000598474 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.6
SOX2-OT-229ENST00000598474 NRAPQ86VF7 1730 aa18.83■□□□□ 0.6
SOX2-OT-229ENST00000598474 NSD3Q9BZ95 1437 aa18.83■□□□□ 0.6
SOX2-OT-229ENST00000598474 SOX12O15370 315 aa18.82■□□□□ 0.6
SOX2-OT-229ENST00000598474 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
SOX2-OT-229ENST00000598474 VPS72Q15906 364 aa18.81■□□□□ 0.6
SOX2-OT-229ENST00000598474 LMO7Q8WWI1 1683 aa18.81■□□□□ 0.6
SOX2-OT-229ENST00000598474 CAMTA1Q9Y6Y1 1673 aa18.8■□□□□ 0.6
SOX2-OT-229ENST00000598474 CDK12Q9NYV4 1490 aaPredicted RBP18.8■□□□□ 0.6
SOX2-OT-229ENST00000598474 FYB1O15117 783 aa18.8■□□□□ 0.6
SOX2-OT-229ENST00000598474 ARHGEF25Q86VW2 580 aa18.8■□□□□ 0.6
SOX2-OT-229ENST00000598474 GJD4Q96KN9 370 aaPredicted RBP18.8■□□□□ 0.6
SOX2-OT-229ENST00000598474 RGS12O14924 1447 aa18.8■□□□□ 0.6
SOX2-OT-229ENST00000598474 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
SOX2-OT-229ENST00000598474 GLI3P10071 1580 aa18.79■□□□□ 0.6
SOX2-OT-229ENST00000598474 AATKQ6ZMQ8 1374 aa18.79■□□□□ 0.6
SOX2-OT-229ENST00000598474 GGNBP2Q9H3C7 697 aa18.78■□□□□ 0.6
SOX2-OT-229ENST00000598474 COG3Q96JB2 828 aa18.77■□□□□ 0.6
SOX2-OT-229ENST00000598474 PANK3Q9H999 370 aa18.77■□□□□ 0.6
SOX2-OT-229ENST00000598474 STRN4Q9NRL3 753 aa18.76■□□□□ 0.59
SOX2-OT-229ENST00000598474 CCDC9Q9Y3X0 531 aaKnown RBP18.76■□□□□ 0.59
SOX2-OT-229ENST00000598474 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
SOX2-OT-229ENST00000598474 COL5A2P05997 1499 aaPredicted RBP18.76■□□□□ 0.59
SOX2-OT-229ENST00000598474 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
SOX2-OT-229ENST00000598474 AXIN2Q9Y2T1 843 aa18.75■□□□□ 0.59
SOX2-OT-229ENST00000598474 COL18A1P39060 1754 aa18.74■□□□□ 0.59
SOX2-OT-229ENST00000598474 SOCS7O14512 581 aa18.74■□□□□ 0.59
SOX2-OT-229ENST00000598474 SPATA31A5Q5VU36 1347 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms