RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 GOLGA6L22H0YM25 854 aa15.44■□□□□ 0.06
USHBP1-207ENST00000597928 CEBPAP49715 358 aaPredicted RBP15.44■□□□□ 0.06
USHBP1-207ENST00000597928 KIF16BQ96L93 1317 aa15.43■□□□□ 0.06
USHBP1-207ENST00000597928 C8orf58Q8NAV2 365 aa15.43■□□□□ 0.06
USHBP1-207ENST00000597928 A0A1W2PP64 1363 aa15.43■□□□□ 0.06
USHBP1-207ENST00000597928 TBC1D32Q96NH3 1257 aa15.43■□□□□ 0.06
USHBP1-207ENST00000597928 CCDC9Q9Y3X0 531 aaKnown RBP15.43■□□□□ 0.06
USHBP1-207ENST00000597928 OS9Q13438 667 aaPredicted RBP15.42■□□□□ 0.06
USHBP1-207ENST00000597928 ABCC2Q92887 1545 aa15.42■□□□□ 0.06
USHBP1-207ENST00000597928 PIK3C2GO75747 1445 aa15.42■□□□□ 0.06
USHBP1-207ENST00000597928 TRMT2AQ8IZ69 625 aaKnown RBP15.42■□□□□ 0.06
USHBP1-207ENST00000597928 NGEFQ8N5V2 710 aa15.42■□□□□ 0.06
USHBP1-207ENST00000597928 MAP4K4O95819 1239 aaPredicted RBP15.42■□□□□ 0.06
USHBP1-207ENST00000597928 L1TD1Q5T7N2 865 aaKnown RBP15.42■□□□□ 0.06
USHBP1-207ENST00000597928 DDX49Q9Y6V7 483 aaKnown RBP15.42■□□□□ 0.06
USHBP1-207ENST00000597928 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
USHBP1-207ENST00000597928 SLC4A2P04920 1241 aa15.41■□□□□ 0.06
USHBP1-207ENST00000597928 MCM4P33991 863 aa15.41■□□□□ 0.06
USHBP1-207ENST00000597928 ERVK-7P63135 1459 aa15.41■□□□□ 0.06
USHBP1-207ENST00000597928 GNAI1P63096 354 aa15.41■□□□□ 0.06
USHBP1-207ENST00000597928 MBIPQ9NS73 344 aa15.41■□□□□ 0.06
USHBP1-207ENST00000597928 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
USHBP1-207ENST00000597928 CDC42BPBQ9Y5S2 1711 aa15.41■□□□□ 0.06
USHBP1-207ENST00000597928 PTPRTO14522 1441 aa15.4■□□□□ 0.06
USHBP1-207ENST00000597928 CASC1Q6TDU7 716 aa15.4■□□□□ 0.06
USHBP1-207ENST00000597928 NUDT16Q96DE0 195 aaKnown RBP15.4■□□□□ 0.06
USHBP1-207ENST00000597928 TRPM1Q7Z4N2 1603 aa15.4■□□□□ 0.06
USHBP1-207ENST00000597928 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
USHBP1-207ENST00000597928 MCTP1Q6DN14 999 aa15.4■□□□□ 0.06
USHBP1-207ENST00000597928 FKBP5Q13451 457 aaPredicted RBP15.39■□□□□ 0.05
USHBP1-207ENST00000597928 TSPYL4Q9UJ04 414 aa15.39■□□□□ 0.05
USHBP1-207ENST00000597928 EXOC6BQ9Y2D4 811 aa15.39■□□□□ 0.05
USHBP1-207ENST00000597928 ADCY10Q96PN6 1610 aa15.39■□□□□ 0.05
USHBP1-207ENST00000597928 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.39■□□□□ 0.05
USHBP1-207ENST00000597928 ARHGEF5Q12774 1597 aa15.39■□□□□ 0.05
USHBP1-207ENST00000597928 FOXO3O43524 673 aa15.39■□□□□ 0.05
USHBP1-207ENST00000597928 NFE2L2Q16236 605 aa15.38■□□□□ 0.05
USHBP1-207ENST00000597928 OTUD7AQ8TE49 926 aaPredicted RBP15.38■□□□□ 0.05
USHBP1-207ENST00000597928 GBP4Q96PP9 640 aa15.38■□□□□ 0.05
USHBP1-207ENST00000597928 LARP6Q9BRS8 491 aaKnown RBP15.38■□□□□ 0.05
USHBP1-207ENST00000597928 USHBP1Q8N6Y0 703 aa15.38■□□□□ 0.05
USHBP1-207ENST00000597928 CALD1Q05682 793 aaKnown RBP15.37■□□□□ 0.05
USHBP1-207ENST00000597928 HSP90AB2PQ58FF8 381 aa15.37■□□□□ 0.05
USHBP1-207ENST00000597928 SLC52A1Q9NWF4 448 aa15.37■□□□□ 0.05
USHBP1-207ENST00000597928 PRDM15P57071 1507 aaPredicted RBP15.37■□□□□ 0.05
USHBP1-207ENST00000597928 FCHSD2O94868 740 aa15.37■□□□□ 0.05
USHBP1-207ENST00000597928 STK31Q9BXU1 1019 aa15.37■□□□□ 0.05
USHBP1-207ENST00000597928 RTEL1-TNFRSF6BF6WH68 1400 aa15.36■□□□□ 0.05
USHBP1-207ENST00000597928 USP19O94966 1318 aa15.36■□□□□ 0.05
USHBP1-207ENST00000597928 TRHP20396 242 aaPredicted RBP15.36■□□□□ 0.05
USHBP1-207ENST00000597928 A0A0G2JS52 829 aa15.36■□□□□ 0.05
USHBP1-207ENST00000597928 CHAMP1Q96JM3 812 aa15.36■□□□□ 0.05
USHBP1-207ENST00000597928 CROCC2H7BZ55 1655 aa15.35■□□□□ 0.05
USHBP1-207ENST00000597928 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.35■□□□□ 0.05
USHBP1-207ENST00000597928 XPCQ01831 940 aaPredicted RBP15.35■□□□□ 0.05
USHBP1-207ENST00000597928 SSFA2P28290 1259 aa15.35■□□□□ 0.05
USHBP1-207ENST00000597928 TBC1D9Q6ZT07 1266 aa15.35■□□□□ 0.05
USHBP1-207ENST00000597928 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
USHBP1-207ENST00000597928 ANO2Q9NQ90 1003 aa15.35■□□□□ 0.05
USHBP1-207ENST00000597928 PREX2Q70Z35 1606 aa15.35■□□□□ 0.05
USHBP1-207ENST00000597928 NLRP6P59044 892 aa15.35■□□□□ 0.05
USHBP1-207ENST00000597928 RNF214Q8ND24 703 aa15.35■□□□□ 0.05
USHBP1-207ENST00000597928 DDX54Q8TDD1 881 aaKnown RBP15.34■□□□□ 0.05
USHBP1-207ENST00000597928 NPATQ14207 1427 aa15.34■□□□□ 0.05
USHBP1-207ENST00000597928 PTMAP06454 111 aaKnown RBP15.34■□□□□ 0.05
USHBP1-207ENST00000597928 INSRP06213 1382 aa15.34■□□□□ 0.05
USHBP1-207ENST00000597928 ANKRD36BQ8N2N9 1353 aa15.34■□□□□ 0.05
USHBP1-207ENST00000597928 API5Q9BZZ5 524 aaKnown RBP15.34■□□□□ 0.05
USHBP1-207ENST00000597928 EIF2AK4Q9P2K8 1649 aaKnown RBP15.33■□□□□ 0.05
USHBP1-207ENST00000597928 ZBTB40Q9NUA8 1239 aa15.33■□□□□ 0.04
USHBP1-207ENST00000597928 ATP7AQ04656 1500 aa15.33■□□□□ 0.04
USHBP1-207ENST00000597928 RPGRIP1LQ68CZ1 1315 aa15.33■□□□□ 0.04
USHBP1-207ENST00000597928 CHMP4BQ9H444 224 aaKnown RBP15.33■□□□□ 0.04
USHBP1-207ENST00000597928 CHMP3Q9Y3E7 222 aa15.33■□□□□ 0.04
USHBP1-207ENST00000597928 VAMP4O75379 141 aa15.32■□□□□ 0.04
USHBP1-207ENST00000597928 CAVIN1Q6NZI2 390 aaKnown RBP15.32■□□□□ 0.04
USHBP1-207ENST00000597928 TNPO1Q92973 898 aaKnown RBP15.32■□□□□ 0.04
USHBP1-207ENST00000597928 ANXA1P04083 346 aa15.32■□□□□ 0.04
USHBP1-207ENST00000597928 KCNJ4P48050 445 aa15.32■□□□□ 0.04
USHBP1-207ENST00000597928 LMOD3Q0VAK6 560 aa15.32■□□□□ 0.04
USHBP1-207ENST00000597928 MEIS3Q99687 375 aa15.32■□□□□ 0.04
USHBP1-207ENST00000597928 CHD1O14646 1710 aa15.32■□□□□ 0.04
USHBP1-207ENST00000597928 CCDC61Q9Y6R9 512 aa15.31■□□□□ 0.04
USHBP1-207ENST00000597928 CDC45O75419 566 aa15.3■□□□□ 0.04
USHBP1-207ENST00000597928 XRCC6P12956 609 aaKnown RBP eCLIP15.3■□□□□ 0.04
USHBP1-207ENST00000597928 NEK4P51957 841 aa15.3■□□□□ 0.04
USHBP1-207ENST00000597928 MYO5CQ9NQX4 1742 aa15.3■□□□□ 0.04
USHBP1-207ENST00000597928 PRPF40AO75400 957 aaKnown RBP15.3■□□□□ 0.04
USHBP1-207ENST00000597928 UPF3BQ9BZI7 483 aaKnown RBP15.3■□□□□ 0.04
USHBP1-207ENST00000597928 WASLO00401 505 aaPredicted RBP15.29■□□□□ 0.04
USHBP1-207ENST00000597928 CD2BP2O95400 341 aaKnown RBP15.29■□□□□ 0.04
USHBP1-207ENST00000597928 CLTCL1P53675 1640 aa15.29■□□□□ 0.04
USHBP1-207ENST00000597928 NUCB1Q02818 461 aa15.29■□□□□ 0.04
USHBP1-207ENST00000597928 NAP1L2Q9ULW6 460 aaPredicted RBP15.29■□□□□ 0.04
USHBP1-207ENST00000597928 DDX11L8A8MPP1 907 aa15.29■□□□□ 0.04
USHBP1-207ENST00000597928 RSPH6AQ9H0K4 717 aa15.29■□□□□ 0.04
USHBP1-207ENST00000597928 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
USHBP1-207ENST00000597928 DNTTIP2Q5QJE6 756 aaKnown RBP15.28■□□□□ 0.04
USHBP1-207ENST00000597928 MRPL50Q8N5N7 158 aaKnown RBP15.28■□□□□ 0.04
USHBP1-207ENST00000597928 ZNF330Q9Y3S2 320 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms