RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
SOX2-OT-228ENST00000597828 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
SOX2-OT-228ENST00000597828 HRCP23327 699 aa17.69■□□□□ 0.42
SOX2-OT-228ENST00000597828 SEPT12Q8IYM1 358 aa17.69■□□□□ 0.42
SOX2-OT-228ENST00000597828 BLMP54132 1417 aaPredicted RBP17.69■□□□□ 0.42
SOX2-OT-228ENST00000597828 NGDNQ8NEJ9 315 aaKnown RBP17.67■□□□□ 0.42
SOX2-OT-228ENST00000597828 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
SOX2-OT-228ENST00000597828 RGPD5Q99666 1765 aa17.66■□□□□ 0.42
SOX2-OT-228ENST00000597828 LMO7Q8WWI1 1683 aa17.65■□□□□ 0.42
SOX2-OT-228ENST00000597828 PAK3O75914 559 aaPredicted RBP17.65■□□□□ 0.42
SOX2-OT-228ENST00000597828 NUDT16Q96DE0 195 aaKnown RBP17.65■□□□□ 0.42
SOX2-OT-228ENST00000597828 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
SOX2-OT-228ENST00000597828 AKAP12Q02952 1782 aa17.65■□□□□ 0.42
SOX2-OT-228ENST00000597828 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
SOX2-OT-228ENST00000597828 DEFB132Q7Z7B7 95 aa17.64■□□□□ 0.41
SOX2-OT-228ENST00000597828 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
SOX2-OT-228ENST00000597828 SRCAPQ6ZRS2 3230 aa17.64■□□□□ 0.41
SOX2-OT-228ENST00000597828 A0A0G2JS52 829 aa17.63■□□□□ 0.41
SOX2-OT-228ENST00000597828 MYT1Q01538 1121 aa17.63■□□□□ 0.41
SOX2-OT-228ENST00000597828 NBPF1Q3BBV0 1214 aa17.63■□□□□ 0.41
SOX2-OT-228ENST00000597828 ONECUT3O60422 494 aaPredicted RBP17.62■□□□□ 0.41
SOX2-OT-228ENST00000597828 FAM98CQ17RN3 349 aaKnown RBP17.62■□□□□ 0.41
SOX2-OT-228ENST00000597828 CDK19Q9BWU1 502 aa17.62■□□□□ 0.41
SOX2-OT-228ENST00000597828 ZRANB1Q9UGI0 708 aa17.62■□□□□ 0.41
SOX2-OT-228ENST00000597828 KRT27Q7Z3Y8 459 aa17.61■□□□□ 0.41
SOX2-OT-228ENST00000597828 POLR3AO14802 1390 aaPredicted RBP17.61■□□□□ 0.41
SOX2-OT-228ENST00000597828 KIAA0232Q92628 1395 aa17.61■□□□□ 0.41
SOX2-OT-228ENST00000597828 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
SOX2-OT-228ENST00000597828 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
SOX2-OT-228ENST00000597828 SBF2Q86WG5 1849 aa17.59■□□□□ 0.41
SOX2-OT-228ENST00000597828 LRP5O75197 1615 aa17.59■□□□□ 0.41
SOX2-OT-228ENST00000597828 ACEP12821 1306 aa17.59■□□□□ 0.41
SOX2-OT-228ENST00000597828 CHRNA2Q15822 529 aa17.59■□□□□ 0.41
SOX2-OT-228ENST00000597828 PRDM11Q9NQV5 511 aa17.59■□□□□ 0.41
SOX2-OT-228ENST00000597828 SPATA31A5Q5VU36 1347 aa17.58■□□□□ 0.4
SOX2-OT-228ENST00000597828 SPATA31A7Q8IWB4 1347 aa17.58■□□□□ 0.4
SOX2-OT-228ENST00000597828 FAM182BQ5T319 152 aa17.58■□□□□ 0.4
SOX2-OT-228ENST00000597828 PARP4Q9UKK3 1724 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-228ENST00000597828 RREB1Q92766 1687 aa17.58■□□□□ 0.4
SOX2-OT-228ENST00000597828 CAMTA1Q9Y6Y1 1673 aa17.58■□□□□ 0.4
SOX2-OT-228ENST00000597828 PPIP5K1Q6PFW1 1433 aa17.57■□□□□ 0.4
SOX2-OT-228ENST00000597828 COL18A1P39060 1754 aa17.56■□□□□ 0.4
SOX2-OT-228ENST00000597828 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
SOX2-OT-228ENST00000597828 ZC3H6P61129 1189 aaKnown RBP17.55■□□□□ 0.4
SOX2-OT-228ENST00000597828 SF3B2Q13435 895 aaKnown RBP17.55■□□□□ 0.4
SOX2-OT-228ENST00000597828 MON2Q7Z3U7 1717 aa17.55■□□□□ 0.4
SOX2-OT-228ENST00000597828 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
SOX2-OT-228ENST00000597828 NBPF8Q3BBV2 869 aa17.54■□□□□ 0.4
SOX2-OT-228ENST00000597828 STRN4Q9NRL3 753 aa17.54■□□□□ 0.4
SOX2-OT-228ENST00000597828 CCDC61Q9Y6R9 512 aa17.54■□□□□ 0.4
SOX2-OT-228ENST00000597828 CABP2Q9NPB3 220 aa17.53■□□□□ 0.4
SOX2-OT-228ENST00000597828 LRRC37A3O60309 1634 aa17.53■□□□□ 0.4
SOX2-OT-228ENST00000597828 SSH2Q76I76 1423 aa17.53■□□□□ 0.4
SOX2-OT-228ENST00000597828 SPATA31A1Q5TZJ5 1347 aa17.52■□□□□ 0.4
SOX2-OT-228ENST00000597828 PLEKHG3A1L390 1219 aa17.52■□□□□ 0.4
SOX2-OT-228ENST00000597828 SRPK2P78362 688 aaKnown RBP17.52■□□□□ 0.4
SOX2-OT-228ENST00000597828 SLIT3O75094 1523 aa17.52■□□□□ 0.39
SOX2-OT-228ENST00000597828 USP19O94966 1318 aa17.51■□□□□ 0.39
SOX2-OT-228ENST00000597828 LTN1O94822 1766 aa17.51■□□□□ 0.39
SOX2-OT-228ENST00000597828 ABTB2Q8N961 1025 aa17.5■□□□□ 0.39
SOX2-OT-228ENST00000597828 L3MBTL2Q969R5 705 aa17.5■□□□□ 0.39
SOX2-OT-228ENST00000597828 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
SOX2-OT-228ENST00000597828 PEAK1Q9H792 1746 aa17.5■□□□□ 0.39
SOX2-OT-228ENST00000597828 USP6P35125 1406 aa17.49■□□□□ 0.39
SOX2-OT-228ENST00000597828 USP35Q9P2H5 1018 aa17.49■□□□□ 0.39
SOX2-OT-228ENST00000597828 COL5A2P05997 1499 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-228ENST00000597828 PSDA5PKW4 1024 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-228ENST00000597828 BAG6P46379 1132 aa17.48■□□□□ 0.39
SOX2-OT-228ENST00000597828 EN1Q05925 392 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-228ENST00000597828 CPDO75976 1380 aa17.47■□□□□ 0.39
SOX2-OT-228ENST00000597828 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
SOX2-OT-228ENST00000597828 USP54Q70EL1 1684 aa17.45■□□□□ 0.38
SOX2-OT-228ENST00000597828 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
SOX2-OT-228ENST00000597828 RGPD3A6NKT7 1758 aaPredicted RBP17.44■□□□□ 0.38
SOX2-OT-228ENST00000597828 RGPD4Q7Z3J3 1758 aa17.44■□□□□ 0.38
SOX2-OT-228ENST00000597828 CABP1Q9NZU7 370 aa17.44■□□□□ 0.38
SOX2-OT-228ENST00000597828 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
SOX2-OT-228ENST00000597828 ZBTB7CA1YPR0 619 aa17.43■□□□□ 0.38
SOX2-OT-228ENST00000597828 EVA1CP58658 441 aa17.43■□□□□ 0.38
SOX2-OT-228ENST00000597828 NEUROD1Q13562 356 aa17.43■□□□□ 0.38
SOX2-OT-228ENST00000597828 TRIM37O94972 964 aa17.42■□□□□ 0.38
SOX2-OT-228ENST00000597828 GCP02774 474 aa17.42■□□□□ 0.38
SOX2-OT-228ENST00000597828 NLRP13Q86W25 1043 aa17.42■□□□□ 0.38
SOX2-OT-228ENST00000597828 EZH2Q15910 746 aaKnown RBP17.41■□□□□ 0.38
SOX2-OT-228ENST00000597828 BRD4O60885 1362 aaPredicted RBP17.4■□□□□ 0.38
SOX2-OT-228ENST00000597828 BARGINQ6ZT62 677 aa17.4■□□□□ 0.38
SOX2-OT-228ENST00000597828 NFAT5O94916 1531 aa17.4■□□□□ 0.38
SOX2-OT-228ENST00000597828 KAT6BQ8WYB5 2073 aa17.4■□□□□ 0.38
SOX2-OT-228ENST00000597828 CRB1P82279 1406 aa17.39■□□□□ 0.38
SOX2-OT-228ENST00000597828 NLRP6P59044 892 aa17.39■□□□□ 0.37
SOX2-OT-228ENST00000597828 TCP11L2Q8N4U5 519 aa17.39■□□□□ 0.37
SOX2-OT-228ENST00000597828 EVC2Q86UK5 1308 aa17.39■□□□□ 0.37
SOX2-OT-228ENST00000597828 R3HDM1Q15032 1099 aaKnown RBP17.38■□□□□ 0.37
SOX2-OT-228ENST00000597828 FAM196AQ6ZSG2 479 aa17.38■□□□□ 0.37
SOX2-OT-228ENST00000597828 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
SOX2-OT-228ENST00000597828 RGPD2P0DJD1 1756 aa17.36■□□□□ 0.37
SOX2-OT-228ENST00000597828 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
SOX2-OT-228ENST00000597828 CAMKK2Q96RR4 588 aa17.36■□□□□ 0.37
SOX2-OT-228ENST00000597828 AATKQ6ZMQ8 1374 aa17.36■□□□□ 0.37
SOX2-OT-228ENST00000597828 SOX12O15370 315 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms