RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, humanhuman

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-210ENST00000597641 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
PRKD2-210ENST00000597641 PHRF1Q9P1Y6 1649 aaKnown RBP22.24■■□□□ 1.15
PRKD2-210ENST00000597641 TOPAZ1Q8N9V7 1692 aa22.24■■□□□ 1.15
PRKD2-210ENST00000597641 FAM98CQ17RN3 349 aaKnown RBP22.24■■□□□ 1.15
PRKD2-210ENST00000597641 NGDNQ8NEJ9 315 aaKnown RBP22.22■■□□□ 1.15
PRKD2-210ENST00000597641 NUDT16Q96DE0 195 aaKnown RBP22.22■■□□□ 1.15
PRKD2-210ENST00000597641 EIF3AQ14152 1382 aaKnown RBP22.22■■□□□ 1.15
PRKD2-210ENST00000597641 THSD7AQ9UPZ6 1657 aa22.21■■□□□ 1.15
PRKD2-210ENST00000597641 FAM182BQ5T319 152 aa22.21■■□□□ 1.15
PRKD2-210ENST00000597641 KIAA1210Q9ULL0 1709 aa22.2■■□□□ 1.14
PRKD2-210ENST00000597641 PAK3O75914 559 aaPredicted RBP22.2■■□□□ 1.14
PRKD2-210ENST00000597641 HRCP23327 699 aa22.2■■□□□ 1.14
PRKD2-210ENST00000597641 SPATA31A5Q5VU36 1347 aa22.19■■□□□ 1.14
PRKD2-210ENST00000597641 SPATA31A7Q8IWB4 1347 aa22.19■■□□□ 1.14
PRKD2-210ENST00000597641 A0A0G2JS52 829 aa22.18■■□□□ 1.14
PRKD2-210ENST00000597641 MYT1Q01538 1121 aa22.18■■□□□ 1.14
PRKD2-210ENST00000597641 CDK19Q9BWU1 502 aa22.18■■□□□ 1.14
PRKD2-210ENST00000597641 NBPF1Q3BBV0 1214 aa22.17■■□□□ 1.14
PRKD2-210ENST00000597641 NUTM2GQ5VZR2 741 aa22.17■■□□□ 1.14
PRKD2-210ENST00000597641 STAC3Q96MF2 364 aa22.17■■□□□ 1.14
PRKD2-210ENST00000597641 TNS1Q9HBL0 1735 aaKnown RBP22.17■■□□□ 1.14
PRKD2-210ENST00000597641 KIAA0232Q92628 1395 aa22.16■■□□□ 1.14
PRKD2-210ENST00000597641 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
PRKD2-210ENST00000597641 RGPD1P0DJD0 1748 aa22.16■■□□□ 1.14
PRKD2-210ENST00000597641 PRDM11Q9NQV5 511 aa22.15■■□□□ 1.14
PRKD2-210ENST00000597641 SF3B2Q13435 895 aaKnown RBP22.14■■□□□ 1.13
PRKD2-210ENST00000597641 POLR3AO14802 1390 aaPredicted RBP22.13■■□□□ 1.13
PRKD2-210ENST00000597641 ACEP12821 1306 aa22.13■■□□□ 1.13
PRKD2-210ENST00000597641 ZC3H6P61129 1189 aaKnown RBP22.12■■□□□ 1.13
PRKD2-210ENST00000597641 NRKQ7Z2Y5 1582 aa22.12■■□□□ 1.13
PRKD2-210ENST00000597641 PSDA5PKW4 1024 aaPredicted RBP22.11■■□□□ 1.13
PRKD2-210ENST00000597641 NBPF8Q3BBV2 869 aa22.11■■□□□ 1.13
PRKD2-210ENST00000597641 SPATA31A1Q5TZJ5 1347 aa22.1■■□□□ 1.13
PRKD2-210ENST00000597641 EN1Q05925 392 aaPredicted RBP22.1■■□□□ 1.13
PRKD2-210ENST00000597641 LRP5O75197 1615 aa22.09■■□□□ 1.13
PRKD2-210ENST00000597641 PLEKHG3A1L390 1219 aa22.09■■□□□ 1.13
PRKD2-210ENST00000597641 LMO7Q8WWI1 1683 aa22.09■■□□□ 1.13
PRKD2-210ENST00000597641 CAMTA1Q9Y6Y1 1673 aa22.09■■□□□ 1.13
PRKD2-210ENST00000597641 STRN4Q9NRL3 753 aa22.08■■□□□ 1.13
PRKD2-210ENST00000597641 CCDC61Q9Y6R9 512 aa22.08■■□□□ 1.13
PRKD2-210ENST00000597641 QRICH2Q9H0J4 1663 aa22.07■■□□□ 1.12
PRKD2-210ENST00000597641 BAG6P46379 1132 aa22.07■■□□□ 1.12
PRKD2-210ENST00000597641 CABP2Q9NPB3 220 aa22.04■■□□□ 1.12
PRKD2-210ENST00000597641 SSH2Q76I76 1423 aa22.04■■□□□ 1.12
PRKD2-210ENST00000597641 USP35Q9P2H5 1018 aa22.03■■□□□ 1.12
PRKD2-210ENST00000597641 PPIP5K1Q6PFW1 1433 aa22.03■■□□□ 1.12
PRKD2-210ENST00000597641 USP19O94966 1318 aa22.03■■□□□ 1.12
PRKD2-210ENST00000597641 LARP1Q6PKG0 1096 aaKnown RBP22.02■■□□□ 1.12
PRKD2-210ENST00000597641 ABTB2Q8N961 1025 aa22.02■■□□□ 1.12
PRKD2-210ENST00000597641 DISP2A7MBM2 1401 aa22.02■■□□□ 1.12
PRKD2-210ENST00000597641 EZH2Q15910 746 aaKnown RBP22.01■■□□□ 1.11
PRKD2-210ENST00000597641 TRIM37O94972 964 aa22■■□□□ 1.11
PRKD2-210ENST00000597641 CENPJQ9HC77 1338 aaPredicted RBP22■■□□□ 1.11
PRKD2-210ENST00000597641 CPDO75976 1380 aa21.99■■□□□ 1.11
PRKD2-210ENST00000597641 SRPK2P78362 688 aaKnown RBP21.99■■□□□ 1.11
PRKD2-210ENST00000597641 CAMKK2Q96RR4 588 aa21.98■■□□□ 1.11
PRKD2-210ENST00000597641 TRPM1Q7Z4N2 1603 aa21.98■■□□□ 1.11
PRKD2-210ENST00000597641 RREB1Q92766 1687 aa21.98■■□□□ 1.11
PRKD2-210ENST00000597641 COL18A1P39060 1754 aa21.97■■□□□ 1.11
PRKD2-210ENST00000597641 R3HDM1Q15032 1099 aaKnown RBP21.97■■□□□ 1.11
PRKD2-210ENST00000597641 PIK3C2AO00443 1686 aa21.97■■□□□ 1.11
PRKD2-210ENST00000597641 RGPD5Q99666 1765 aa21.97■■□□□ 1.11
PRKD2-210ENST00000597641 GCP02774 474 aa21.96■■□□□ 1.11
PRKD2-210ENST00000597641 EVA1CP58658 441 aa21.96■■□□□ 1.11
PRKD2-210ENST00000597641 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
PRKD2-210ENST00000597641 L3MBTL2Q969R5 705 aa21.96■■□□□ 1.11
PRKD2-210ENST00000597641 NUP188Q5SRE5 1749 aa21.96■■□□□ 1.11
PRKD2-210ENST00000597641 PARP4Q9UKK3 1724 aaKnown RBP21.96■■□□□ 1.11
PRKD2-210ENST00000597641 COL5A2P05997 1499 aaPredicted RBP21.96■■□□□ 1.11
PRKD2-210ENST00000597641 SBF2Q86WG5 1849 aa21.95■■□□□ 1.1
PRKD2-210ENST00000597641 FAM196AQ6ZSG2 479 aa21.95■■□□□ 1.1
PRKD2-210ENST00000597641 SIN3AQ96ST3 1273 aa21.95■■□□□ 1.1
PRKD2-210ENST00000597641 CABP1Q9NZU7 370 aa21.95■■□□□ 1.1
PRKD2-210ENST00000597641 USP6P35125 1406 aa21.94■■□□□ 1.1
PRKD2-210ENST00000597641 SLIT3O75094 1523 aa21.94■■□□□ 1.1
PRKD2-210ENST00000597641 AKAP12Q02952 1782 aa21.93■■□□□ 1.1
PRKD2-210ENST00000597641 PEAK1Q9H792 1746 aa21.92■■□□□ 1.1
PRKD2-210ENST00000597641 NLRP13Q86W25 1043 aa21.92■■□□□ 1.1
PRKD2-210ENST00000597641 TCP11L2Q8N4U5 519 aa21.92■■□□□ 1.1
PRKD2-210ENST00000597641 WNK3Q9BYP7 1800 aa21.92■■□□□ 1.1
PRKD2-210ENST00000597641 APBA3O96018 575 aa21.91■■□□□ 1.1
PRKD2-210ENST00000597641 LRRC37A3O60309 1634 aa21.89■■□□□ 1.09
PRKD2-210ENST00000597641 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.09
PRKD2-210ENST00000597641 PDE3BQ13370 1112 aa21.89■■□□□ 1.09
PRKD2-210ENST00000597641 NLRP6P59044 892 aa21.88■■□□□ 1.09
PRKD2-210ENST00000597641 AXIN2Q9Y2T1 843 aa21.86■■□□□ 1.09
PRKD2-210ENST00000597641 CRB1P82279 1406 aa21.86■■□□□ 1.09
PRKD2-210ENST00000597641 BRD4O60885 1362 aaPredicted RBP21.86■■□□□ 1.09
PRKD2-210ENST00000597641 AATKQ6ZMQ8 1374 aa21.85■■□□□ 1.09
PRKD2-210ENST00000597641 PTF1AQ7RTS3 328 aa21.84■■□□□ 1.09
PRKD2-210ENST00000597641 THRAP3Q9Y2W1 955 aaKnown RBP21.84■■□□□ 1.09
PRKD2-210ENST00000597641 NEUROD1Q13562 356 aa21.83■■□□□ 1.09
PRKD2-210ENST00000597641 PARD3Q8TEW0 1356 aa21.83■■□□□ 1.08
PRKD2-210ENST00000597641 TTC21BQ7Z4L5 1316 aa21.81■■□□□ 1.08
PRKD2-210ENST00000597641 EVC2Q86UK5 1308 aa21.81■■□□□ 1.08
PRKD2-210ENST00000597641 MON2Q7Z3U7 1717 aa21.81■■□□□ 1.08
PRKD2-210ENST00000597641 ROCK2O75116 1388 aaKnown RBP21.8■■□□□ 1.08
PRKD2-210ENST00000597641 NFAT5O94916 1531 aa21.8■■□□□ 1.08
PRKD2-210ENST00000597641 CPSF1Q10570 1443 aaKnown RBP21.8■■□□□ 1.08
PRKD2-210ENST00000597641 SOX12O15370 315 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms