RNA–Protein interactions for RNA: ENST00000597390.5

PRKD2-208, Transcript of protein kinase D2, humanhuman

TSL 1 (best)

Gene PRKD2, Length 1,367 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-208ENST00000597390 CDK19Q9BWU1 502 aa19.07■□□□□ 0.64
PRKD2-208ENST00000597390 TOPAZ1Q8N9V7 1692 aa19.07■□□□□ 0.64
PRKD2-208ENST00000597390 EVC2Q86UK5 1308 aa19.07■□□□□ 0.64
PRKD2-208ENST00000597390 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.07■□□□□ 0.64
PRKD2-208ENST00000597390 ATRNO75882 1429 aa19.07■□□□□ 0.64
PRKD2-208ENST00000597390 LMOD2Q6P5Q4 547 aa19.06■□□□□ 0.64
PRKD2-208ENST00000597390 NGDNQ8NEJ9 315 aaKnown RBP19.06■□□□□ 0.64
PRKD2-208ENST00000597390 BCL9LQ86UU0 1499 aa19.06■□□□□ 0.64
PRKD2-208ENST00000597390 RGS12O14924 1447 aa19.06■□□□□ 0.64
PRKD2-208ENST00000597390 TMF1P82094 1093 aa19.06■□□□□ 0.64
PRKD2-208ENST00000597390 HAP1P54257 671 aaPredicted RBP19.05■□□□□ 0.64
PRKD2-208ENST00000597390 SLIT2O94813 1529 aa19.04■□□□□ 0.64
PRKD2-208ENST00000597390 CABLES1Q8TDN4 633 aa19.04■□□□□ 0.64
PRKD2-208ENST00000597390 PUS7Q96PZ0 661 aaKnown RBP19.03■□□□□ 0.64
PRKD2-208ENST00000597390 KIF7Q2M1P5 1343 aa19.02■□□□□ 0.64
PRKD2-208ENST00000597390 WASHC2AQ641Q2 1341 aa19.02■□□□□ 0.64
PRKD2-208ENST00000597390 CABP2Q9NPB3 220 aa19.02■□□□□ 0.64
PRKD2-208ENST00000597390 CCDC61Q9Y6R9 512 aa19.02■□□□□ 0.64
PRKD2-208ENST00000597390 PLCH1Q4KWH8 1693 aa19.02■□□□□ 0.63
PRKD2-208ENST00000597390 NWD2Q9ULI1 1742 aa19.01■□□□□ 0.63
PRKD2-208ENST00000597390 PLEKHG5O94827 1062 aa19.01■□□□□ 0.63
PRKD2-208ENST00000597390 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
PRKD2-208ENST00000597390 POLR3AO14802 1390 aaPredicted RBP19■□□□□ 0.63
PRKD2-208ENST00000597390 CCDC7Q96M83 1385 aa19■□□□□ 0.63
PRKD2-208ENST00000597390 MYOM1P52179 1685 aa19■□□□□ 0.63
PRKD2-208ENST00000597390 ZNF316A6NFI3 1004 aaPredicted RBP19■□□□□ 0.63
PRKD2-208ENST00000597390 SRPK2P78362 688 aaKnown RBP19■□□□□ 0.63
PRKD2-208ENST00000597390 UNC5CLQ8IV45 518 aa19■□□□□ 0.63
PRKD2-208ENST00000597390 PLEKHG3A1L390 1219 aa18.99■□□□□ 0.63
PRKD2-208ENST00000597390 PAK3O75914 559 aaPredicted RBP18.99■□□□□ 0.63
PRKD2-208ENST00000597390 CDCA8Q53HL2 280 aa18.99■□□□□ 0.63
PRKD2-208ENST00000597390 ACEP12821 1306 aa18.98■□□□□ 0.63
PRKD2-208ENST00000597390 GJD4Q96KN9 370 aaPredicted RBP18.97■□□□□ 0.63
PRKD2-208ENST00000597390 ATAD2Q6PL18 1390 aa18.97■□□□□ 0.63
PRKD2-208ENST00000597390 PPIP5K1Q6PFW1 1433 aa18.96■□□□□ 0.63
PRKD2-208ENST00000597390 GLI3P10071 1580 aa18.95■□□□□ 0.62
PRKD2-208ENST00000597390 COL14A1Q05707 1796 aaKnown RBP18.95■□□□□ 0.62
PRKD2-208ENST00000597390 PHRF1Q9P1Y6 1649 aaKnown RBP18.94■□□□□ 0.62
PRKD2-208ENST00000597390 FAM83GA6ND36 823 aa18.93■□□□□ 0.62
PRKD2-208ENST00000597390 NRAPQ86VF7 1730 aa18.93■□□□□ 0.62
PRKD2-208ENST00000597390 VPS72Q15906 364 aa18.93■□□□□ 0.62
PRKD2-208ENST00000597390 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
PRKD2-208ENST00000597390 SLC12A5Q9H2X9 1139 aa18.92■□□□□ 0.62
PRKD2-208ENST00000597390 CD163L1Q9NR16 1453 aa18.92■□□□□ 0.62
PRKD2-208ENST00000597390 NINLQ9Y2I6 1382 aa18.91■□□□□ 0.62
PRKD2-208ENST00000597390 CABP1Q9NZU7 370 aa18.91■□□□□ 0.62
PRKD2-208ENST00000597390 ZRANB1Q9UGI0 708 aa18.91■□□□□ 0.62
PRKD2-208ENST00000597390 BRD4O60885 1362 aaPredicted RBP18.9■□□□□ 0.62
PRKD2-208ENST00000597390 AKAP12Q02952 1782 aa18.89■□□□□ 0.61
PRKD2-208ENST00000597390 BTG4Q9NY30 223 aa18.89■□□□□ 0.61
PRKD2-208ENST00000597390 CPSF1Q10570 1443 aaKnown RBP18.88■□□□□ 0.61
PRKD2-208ENST00000597390 ABTB2Q8N961 1025 aa18.88■□□□□ 0.61
PRKD2-208ENST00000597390 TMC1Q8TDI8 760 aa18.88■□□□□ 0.61
PRKD2-208ENST00000597390 NUTM2GQ5VZR2 741 aa18.87■□□□□ 0.61
PRKD2-208ENST00000597390 PRDM11Q9NQV5 511 aa18.87■□□□□ 0.61
PRKD2-208ENST00000597390 CCDC9Q9Y3X0 531 aaKnown RBP18.87■□□□□ 0.61
PRKD2-208ENST00000597390 BRWD3Q6RI45 1802 aa18.86■□□□□ 0.61
PRKD2-208ENST00000597390 USP6P35125 1406 aa18.86■□□□□ 0.61
PRKD2-208ENST00000597390 NRKQ7Z2Y5 1582 aa18.86■□□□□ 0.61
PRKD2-208ENST00000597390 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
PRKD2-208ENST00000597390 MON2Q7Z3U7 1717 aa18.85■□□□□ 0.61
PRKD2-208ENST00000597390 A0A1W2PP64 1363 aa18.85■□□□□ 0.61
PRKD2-208ENST00000597390 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
PRKD2-208ENST00000597390 NLRP13Q86W25 1043 aa18.84■□□□□ 0.61
PRKD2-208ENST00000597390 EP400Q96L91 3159 aa18.84■□□□□ 0.61
PRKD2-208ENST00000597390 USP19O94966 1318 aa18.84■□□□□ 0.61
PRKD2-208ENST00000597390 ONECUT3O60422 494 aaPredicted RBP18.83■□□□□ 0.61
PRKD2-208ENST00000597390 PANK3Q9H999 370 aa18.83■□□□□ 0.61
PRKD2-208ENST00000597390 ZC3H6P61129 1189 aaKnown RBP18.82■□□□□ 0.6
PRKD2-208ENST00000597390 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
PRKD2-208ENST00000597390 SEPT12Q8IYM1 358 aa18.82■□□□□ 0.6
PRKD2-208ENST00000597390 CARD14Q9BXL6 1004 aa18.82■□□□□ 0.6
PRKD2-208ENST00000597390 TERF2IPQ9NYB0 399 aa18.82■□□□□ 0.6
PRKD2-208ENST00000597390 SSH2Q76I76 1423 aa18.82■□□□□ 0.6
PRKD2-208ENST00000597390 ZNF692Q9BU19 519 aaPredicted RBP18.81■□□□□ 0.6
PRKD2-208ENST00000597390 CHRNA2Q15822 529 aa18.81■□□□□ 0.6
PRKD2-208ENST00000597390 PIK3C2AO00443 1686 aa18.8■□□□□ 0.6
PRKD2-208ENST00000597390 CPDO75976 1380 aa18.8■□□□□ 0.6
PRKD2-208ENST00000597390 KTN1Q86UP2 1357 aaKnown RBP18.8■□□□□ 0.6
PRKD2-208ENST00000597390 HDGFL2Q7Z4V5 671 aaPredicted RBP18.8■□□□□ 0.6
PRKD2-208ENST00000597390 SPATA31A5Q5VU36 1347 aa18.79■□□□□ 0.6
PRKD2-208ENST00000597390 SPATA31A7Q8IWB4 1347 aa18.79■□□□□ 0.6
PRKD2-208ENST00000597390 LMO7Q8WWI1 1683 aa18.79■□□□□ 0.6
PRKD2-208ENST00000597390 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
PRKD2-208ENST00000597390 GCP02774 474 aa18.78■□□□□ 0.6
PRKD2-208ENST00000597390 NLRP6P59044 892 aa18.78■□□□□ 0.6
PRKD2-208ENST00000597390 FAM98CQ17RN3 349 aaKnown RBP18.78■□□□□ 0.6
PRKD2-208ENST00000597390 CCDC125Q86Z20 511 aa18.78■□□□□ 0.6
PRKD2-208ENST00000597390 SLIT3O75094 1523 aa18.78■□□□□ 0.6
PRKD2-208ENST00000597390 EDC4Q6P2E9 1401 aaKnown RBP18.78■□□□□ 0.6
PRKD2-208ENST00000597390 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
PRKD2-208ENST00000597390 CAMTA1Q9Y6Y1 1673 aa18.76■□□□□ 0.59
PRKD2-208ENST00000597390 A0A0G2JS52 829 aa18.76■□□□□ 0.59
PRKD2-208ENST00000597390 MYT1Q01538 1121 aa18.76■□□□□ 0.59
PRKD2-208ENST00000597390 KRT27Q7Z3Y8 459 aa18.76■□□□□ 0.59
PRKD2-208ENST00000597390 NSD3Q9BZ95 1437 aa18.76■□□□□ 0.59
PRKD2-208ENST00000597390 STRN4Q9NRL3 753 aa18.76■□□□□ 0.59
PRKD2-208ENST00000597390 TTC21AQ8NDW8 1320 aa18.76■□□□□ 0.59
PRKD2-208ENST00000597390 THSD7AQ9UPZ6 1657 aa18.75■□□□□ 0.59
PRKD2-208ENST00000597390 SPATA31A1Q5TZJ5 1347 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms