RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 CDK12Q9NYV4 1490 aaPredicted RBP15.71■□□□□ 0.1
SH2D3A-206ENST00000597254 KRT28Q7Z3Y7 464 aa15.7■□□□□ 0.1
SH2D3A-206ENST00000597254 CARD14Q9BXL6 1004 aa15.7■□□□□ 0.1
SH2D3A-206ENST00000597254 USP21Q9UK80 565 aa15.7■□□□□ 0.1
SH2D3A-206ENST00000597254 PHF8Q9UPP1 1060 aa15.7■□□□□ 0.1
SH2D3A-206ENST00000597254 KIF1AQ12756 1690 aa15.7■□□□□ 0.1
SH2D3A-206ENST00000597254 COL22A1Q8NFW1 1626 aaPredicted RBP15.69■□□□□ 0.1
SH2D3A-206ENST00000597254 TERF2IPQ9NYB0 399 aa15.69■□□□□ 0.1
SH2D3A-206ENST00000597254 KNSTRNQ9Y448 316 aa15.69■□□□□ 0.1
SH2D3A-206ENST00000597254 ANKRD36BQ8N2N9 1353 aa15.69■□□□□ 0.1
SH2D3A-206ENST00000597254 ATP7BP35670 1465 aa15.69■□□□□ 0.1
SH2D3A-206ENST00000597254 PPIP5K1Q6PFW1 1433 aa15.68■□□□□ 0.1
SH2D3A-206ENST00000597254 PLEKHG3A1L390 1219 aa15.68■□□□□ 0.1
SH2D3A-206ENST00000597254 PSME1Q06323 249 aa15.68■□□□□ 0.1
SH2D3A-206ENST00000597254 HDGFL2Q7Z4V5 671 aaPredicted RBP15.68■□□□□ 0.1
SH2D3A-206ENST00000597254 TRPC5Q9UL62 973 aaPredicted RBP15.68■□□□□ 0.1
SH2D3A-206ENST00000597254 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
SH2D3A-206ENST00000597254 FNBP4Q8N3X1 1017 aaPredicted RBP15.67■□□□□ 0.1
SH2D3A-206ENST00000597254 USP32Q8NFA0 1604 aa15.67■□□□□ 0.1
SH2D3A-206ENST00000597254 ANKARQ7Z5J8 1434 aa15.67■□□□□ 0.1
SH2D3A-206ENST00000597254 CD163L1Q9NR16 1453 aa15.66■□□□□ 0.1
SH2D3A-206ENST00000597254 UPF1Q92900 1129 aaKnown RBP eCLIP15.66■□□□□ 0.1
SH2D3A-206ENST00000597254 ZNF692Q9BU19 519 aaPredicted RBP15.66■□□□□ 0.1
SH2D3A-206ENST00000597254 RGPD8O14715 1765 aaPredicted RBP15.66■□□□□ 0.1
SH2D3A-206ENST00000597254 A0A1W2PP64 1363 aa15.65■□□□□ 0.1
SH2D3A-206ENST00000597254 HAP1P54257 671 aaPredicted RBP15.65■□□□□ 0.1
SH2D3A-206ENST00000597254 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
SH2D3A-206ENST00000597254 AMER1Q5JTC6 1135 aaPredicted RBP15.65■□□□□ 0.1
SH2D3A-206ENST00000597254 PRKRIP1Q9H875 184 aaPredicted RBP15.65■□□□□ 0.1
SH2D3A-206ENST00000597254 RGS12O14924 1447 aa15.64■□□□□ 0.09
SH2D3A-206ENST00000597254 CPSF1Q10570 1443 aaKnown RBP15.64■□□□□ 0.09
SH2D3A-206ENST00000597254 LMOD2Q6P5Q4 547 aa15.64■□□□□ 0.09
SH2D3A-206ENST00000597254 PMFBP1Q8TBY8 1022 aa15.64■□□□□ 0.09
SH2D3A-206ENST00000597254 ACEP12821 1306 aa15.64■□□□□ 0.09
SH2D3A-206ENST00000597254 NSD3Q9BZ95 1437 aa15.63■□□□□ 0.09
SH2D3A-206ENST00000597254 CC2D1BQ5T0F9 858 aaKnown RBP15.63■□□□□ 0.09
SH2D3A-206ENST00000597254 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
SH2D3A-206ENST00000597254 TNS3Q68CZ2 1445 aa15.62■□□□□ 0.09
SH2D3A-206ENST00000597254 PLEKHG5O94827 1062 aa15.62■□□□□ 0.09
SH2D3A-206ENST00000597254 ITSN1Q15811 1721 aa15.62■□□□□ 0.09
SH2D3A-206ENST00000597254 SBNO1A3KN83 1393 aa15.62■□□□□ 0.09
SH2D3A-206ENST00000597254 KTN1Q86UP2 1357 aaKnown RBP15.62■□□□□ 0.09
SH2D3A-206ENST00000597254 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
SH2D3A-206ENST00000597254 ATRNO75882 1429 aa15.61■□□□□ 0.09
SH2D3A-206ENST00000597254 MARF1Q9Y4F3 1742 aaKnown RBP15.61■□□□□ 0.09
SH2D3A-206ENST00000597254 RALBP1Q15311 655 aa15.61■□□□□ 0.09
SH2D3A-206ENST00000597254 NGDNQ8NEJ9 315 aaKnown RBP15.61■□□□□ 0.09
SH2D3A-206ENST00000597254 ARHGEF10O15013 1369 aa15.61■□□□□ 0.09
SH2D3A-206ENST00000597254 AKAP12Q02952 1782 aa15.59■□□□□ 0.09
SH2D3A-206ENST00000597254 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
SH2D3A-206ENST00000597254 CABLES1Q8TDN4 633 aa15.59■□□□□ 0.09
SH2D3A-206ENST00000597254 CGNL1Q0VF96 1302 aa15.59■□□□□ 0.09
SH2D3A-206ENST00000597254 POLR3AO14802 1390 aaPredicted RBP15.59■□□□□ 0.09
SH2D3A-206ENST00000597254 UNC5CLQ8IV45 518 aa15.58■□□□□ 0.08
SH2D3A-206ENST00000597254 CCER2I3L3R5 266 aa15.57■□□□□ 0.08
SH2D3A-206ENST00000597254 FYB1O15117 783 aa15.57■□□□□ 0.08
SH2D3A-206ENST00000597254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.57■□□□□ 0.08
SH2D3A-206ENST00000597254 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
SH2D3A-206ENST00000597254 PARD3Q8TEW0 1356 aa15.57■□□□□ 0.08
SH2D3A-206ENST00000597254 EDC4Q6P2E9 1401 aaKnown RBP15.57■□□□□ 0.08
SH2D3A-206ENST00000597254 MON2Q7Z3U7 1717 aa15.57■□□□□ 0.08
SH2D3A-206ENST00000597254 TTC21BQ7Z4L5 1316 aa15.56■□□□□ 0.08
SH2D3A-206ENST00000597254 USP6P35125 1406 aa15.56■□□□□ 0.08
SH2D3A-206ENST00000597254 SLIT2O94813 1529 aa15.55■□□□□ 0.08
SH2D3A-206ENST00000597254 GGNBP2Q9H3C7 697 aa15.55■□□□□ 0.08
SH2D3A-206ENST00000597254 SSH2Q76I76 1423 aa15.54■□□□□ 0.08
SH2D3A-206ENST00000597254 NSD2O96028 1365 aa15.54■□□□□ 0.08
SH2D3A-206ENST00000597254 PAK3O75914 559 aaPredicted RBP15.54■□□□□ 0.08
SH2D3A-206ENST00000597254 MORC1Q86VD1 984 aa15.54■□□□□ 0.08
SH2D3A-206ENST00000597254 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.54■□□□□ 0.08
SH2D3A-206ENST00000597254 MYBBP1AQ9BQG0 1328 aaKnown RBP15.53■□□□□ 0.08
SH2D3A-206ENST00000597254 NME9Q86XW9 330 aa15.53■□□□□ 0.08
SH2D3A-206ENST00000597254 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
SH2D3A-206ENST00000597254 TTC21AQ8NDW8 1320 aa15.52■□□□□ 0.08
SH2D3A-206ENST00000597254 CCDC184Q52MB2 194 aa15.52■□□□□ 0.08
SH2D3A-206ENST00000597254 BRD4O60885 1362 aaPredicted RBP15.51■□□□□ 0.07
SH2D3A-206ENST00000597254 PPP2R1AP30153 589 aa15.51■□□□□ 0.07
SH2D3A-206ENST00000597254 ZRANB1Q9UGI0 708 aa15.51■□□□□ 0.07
SH2D3A-206ENST00000597254 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
SH2D3A-206ENST00000597254 NRKQ7Z2Y5 1582 aa15.5■□□□□ 0.07
SH2D3A-206ENST00000597254 FAM83GA6ND36 823 aa15.5■□□□□ 0.07
SH2D3A-206ENST00000597254 VPS72Q15906 364 aa15.5■□□□□ 0.07
SH2D3A-206ENST00000597254 KIF20BQ96Q89 1820 aa15.5■□□□□ 0.07
SH2D3A-206ENST00000597254 ABCA3Q99758 1704 aa15.49■□□□□ 0.07
SH2D3A-206ENST00000597254 NLRP13Q86W25 1043 aa15.49■□□□□ 0.07
SH2D3A-206ENST00000597254 COG3Q96JB2 828 aa15.49■□□□□ 0.07
SH2D3A-206ENST00000597254 ALS2Q96Q42 1657 aa15.48■□□□□ 0.07
SH2D3A-206ENST00000597254 TNNT2P45379 298 aaPredicted RBP15.48■□□□□ 0.07
SH2D3A-206ENST00000597254 NWD2Q9ULI1 1742 aa15.48■□□□□ 0.07
SH2D3A-206ENST00000597254 ANKRD26Q9UPS8 1709 aa15.48■□□□□ 0.07
SH2D3A-206ENST00000597254 PLCH1Q4KWH8 1693 aa15.48■□□□□ 0.07
SH2D3A-206ENST00000597254 GLI3P10071 1580 aa15.47■□□□□ 0.07
SH2D3A-206ENST00000597254 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
SH2D3A-206ENST00000597254 CCDC125Q86Z20 511 aa15.46■□□□□ 0.07
SH2D3A-206ENST00000597254 SEPT12Q8IYM1 358 aa15.46■□□□□ 0.07
SH2D3A-206ENST00000597254 ABTB2Q8N961 1025 aa15.46■□□□□ 0.07
SH2D3A-206ENST00000597254 BTG4Q9NY30 223 aa15.46■□□□□ 0.07
SH2D3A-206ENST00000597254 USP31Q70CQ4 1352 aa15.46■□□□□ 0.07
SH2D3A-206ENST00000597254 A0A0G2JS52 829 aa15.45■□□□□ 0.06
SH2D3A-206ENST00000597254 NLRP6P59044 892 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms