RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 MCTP1Q6DN14 999 aa28.37■■■□□ 2.13
SIN3B-209ENST00000596802 SMC4Q9NTJ3 1288 aa28.37■■■□□ 2.13
SIN3B-209ENST00000596802 PRIM1P49642 420 aaKnown RBP28.36■■■□□ 2.13
SIN3B-209ENST00000596802 UTP14CQ5TAP6 766 aaKnown RBP28.36■■■□□ 2.13
SIN3B-209ENST00000596802 AK9Q5TCS8 1911 aa28.36■■■□□ 2.13
SIN3B-209ENST00000596802 DMTNQ08495 405 aa28.36■■■□□ 2.13
SIN3B-209ENST00000596802 LMBRD1Q9NUN5 540 aa28.36■■■□□ 2.13
SIN3B-209ENST00000596802 NCLP19338 710 aaKnown RBP28.35■■■□□ 2.13
SIN3B-209ENST00000596802 SYCP2Q9BX26 1530 aa28.35■■■□□ 2.13
SIN3B-209ENST00000596802 CCDC94Q9BW85 323 aaPredicted RBP28.35■■■□□ 2.13
SIN3B-209ENST00000596802 PREX2Q70Z35 1606 aa28.34■■■□□ 2.13
SIN3B-209ENST00000596802 ZBTB40Q9NUA8 1239 aa28.34■■■□□ 2.13
SIN3B-209ENST00000596802 CFAP74Q9C0B2 1584 aa28.34■■■□□ 2.13
SIN3B-209ENST00000596802 CT47B1P0C2W7 299 aaPredicted RBP28.33■■■□□ 2.13
SIN3B-209ENST00000596802 ATF7IPQ6VMQ6 1270 aa28.33■■■□□ 2.13
SIN3B-209ENST00000596802 CHD1LQ86WJ1 897 aa28.33■■■□□ 2.13
SIN3B-209ENST00000596802 CARMIL2Q6F5E8 1435 aa28.32■■■□□ 2.12
SIN3B-209ENST00000596802 ZSCAN20P17040 1043 aaPredicted RBP28.31■■■□□ 2.12
SIN3B-209ENST00000596802 TNNT2P45379 298 aaPredicted RBP28.31■■■□□ 2.12
SIN3B-209ENST00000596802 TSR2Q969E8 191 aaKnown RBP28.31■■■□□ 2.12
SIN3B-209ENST00000596802 MORC1Q86VD1 984 aa28.3■■■□□ 2.12
SIN3B-209ENST00000596802 TMEM57Q8N5G2 664 aa28.3■■■□□ 2.12
SIN3B-209ENST00000596802 SSH1Q8WYL5 1049 aa28.3■■■□□ 2.12
SIN3B-209ENST00000596802 TBC1D9Q6ZT07 1266 aa28.3■■■□□ 2.12
SIN3B-209ENST00000596802 CYP2E1P05181 493 aaPredicted RBP28.29■■■□□ 2.12
SIN3B-209ENST00000596802 CCDC39Q9UFE4 941 aa28.29■■■□□ 2.12
SIN3B-209ENST00000596802 NCBP3Q53F19 620 aaKnown RBP28.28■■■□□ 2.12
SIN3B-209ENST00000596802 KIF16BQ96L93 1317 aa28.28■■■□□ 2.12
SIN3B-209ENST00000596802 EXOSC9Q06265 439 aaKnown RBP28.27■■■□□ 2.12
SIN3B-209ENST00000596802 STAC3Q96MF2 364 aa28.27■■■□□ 2.12
SIN3B-209ENST00000596802 NUCB2P80303 420 aa28.27■■■□□ 2.12
SIN3B-209ENST00000596802 FGD1P98174 961 aa28.27■■■□□ 2.12
SIN3B-209ENST00000596802 NOB1Q9ULX3 412 aaKnown RBP28.26■■■□□ 2.11
SIN3B-209ENST00000596802 ZNF518AQ6AHZ1 1483 aa28.26■■■□□ 2.11
SIN3B-209ENST00000596802 RBM27Q9P2N5 1060 aaKnown RBP28.26■■■□□ 2.11
SIN3B-209ENST00000596802 SLC24A1O60721 1099 aa28.25■■■□□ 2.11
SIN3B-209ENST00000596802 GPT2Q8TD30 523 aa28.25■■■□□ 2.11
SIN3B-209ENST00000596802 NSD3Q9BZ95 1437 aa28.25■■■□□ 2.11
SIN3B-209ENST00000596802 PKP1Q13835 747 aa28.23■■■□□ 2.11
SIN3B-209ENST00000596802 KIAA1210Q9ULL0 1709 aa28.23■■■□□ 2.11
SIN3B-209ENST00000596802 NOS1P29475 1434 aa28.23■■■□□ 2.11
SIN3B-209ENST00000596802 ADGRB2O60241 1585 aa28.22■■■□□ 2.11
SIN3B-209ENST00000596802 MTHFSP49914 203 aa28.22■■■□□ 2.11
SIN3B-209ENST00000596802 LRSAM1Q6UWE0 723 aa28.22■■■□□ 2.11
SIN3B-209ENST00000596802 MYRIPQ8NFW9 859 aa28.21■■■□□ 2.11
SIN3B-209ENST00000596802 TRPM2O94759 1503 aa28.21■■■□□ 2.11
SIN3B-209ENST00000596802 PRPF40AO75400 957 aaKnown RBP28.2■■■□□ 2.1
SIN3B-209ENST00000596802 JPH4Q96JJ6 628 aa28.2■■■□□ 2.1
SIN3B-209ENST00000596802 TMEM63CQ9P1W3 806 aa28.19■■■□□ 2.1
SIN3B-209ENST00000596802 ADGRL1O94910 1474 aa28.18■■■□□ 2.1
SIN3B-209ENST00000596802 ANKRD45Q5TZF3 282 aa28.18■■■□□ 2.1
SIN3B-209ENST00000596802 JARID2Q92833 1246 aaPredicted RBP28.17■■■□□ 2.1
SIN3B-209ENST00000596802 CLTCL1P53675 1640 aa28.17■■■□□ 2.1
SIN3B-209ENST00000596802 SYCE3A1L190 88 aa28.17■■■□□ 2.1
SIN3B-209ENST00000596802 RABEP1Q15276 862 aa28.17■■■□□ 2.1
SIN3B-209ENST00000596802 ZNF710Q8N1W2 664 aa28.17■■■□□ 2.1
SIN3B-209ENST00000596802 CFAP53Q96M91 514 aa28.17■■■□□ 2.1
SIN3B-209ENST00000596802 PTPRTO14522 1441 aa28.16■■■□□ 2.1
SIN3B-209ENST00000596802 KIAA2012Q0VF49 1180 aa28.15■■■□□ 2.1
SIN3B-209ENST00000596802 CFAP70Q5T0N1 1121 aa28.15■■■□□ 2.1
SIN3B-209ENST00000596802 U2AF1L5P0DN76 240 aaPredicted RBP28.15■■■□□ 2.1
SIN3B-209ENST00000596802 U2AF1Q01081 240 aaKnown RBP eCLIP28.15■■■□□ 2.1
SIN3B-209ENST00000596802 ABCC11Q96J66 1382 aa28.14■■■□□ 2.1
SIN3B-209ENST00000596802 ARHGAP5Q13017 1502 aa28.14■■■□□ 2.09
SIN3B-209ENST00000596802 PPIP5K1Q6PFW1 1433 aa28.13■■■□□ 2.09
SIN3B-209ENST00000596802 CDC45O75419 566 aa28.13■■■□□ 2.09
SIN3B-209ENST00000596802 TSC1Q92574 1164 aa28.13■■■□□ 2.09
SIN3B-209ENST00000596802 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.13■■■□□ 2.09
SIN3B-209ENST00000596802 GCC1Q96CN9 775 aa28.12■■■□□ 2.09
SIN3B-209ENST00000596802 GTPBP4Q9BZE4 634 aaKnown RBP28.12■■■□□ 2.09
SIN3B-209ENST00000596802 NSFL1CQ9UNZ2 370 aaKnown RBP28.12■■■□□ 2.09
SIN3B-209ENST00000596802 RNF214Q8ND24 703 aa28.11■■■□□ 2.09
SIN3B-209ENST00000596802 IPO8O15397 1037 aaKnown RBP28.11■■■□□ 2.09
SIN3B-209ENST00000596802 ZDHHC9Q9Y397 364 aa28.11■■■□□ 2.09
SIN3B-209ENST00000596802 CD109Q6YHK3 1445 aa28.11■■■□□ 2.09
SIN3B-209ENST00000596802 CWC22Q9HCG8 908 aaKnown RBP28.1■■■□□ 2.09
SIN3B-209ENST00000596802 CBX1P83916 185 aa28.1■■■□□ 2.09
SIN3B-209ENST00000596802 PRIMPOLQ96LW4 560 aa28.1■■■□□ 2.09
SIN3B-209ENST00000596802 SBNO2Q9Y2G9 1366 aa28.1■■■□□ 2.09
SIN3B-209ENST00000596802 GTF2F1P35269 517 aaKnown RBP eCLIP28.09■■■□□ 2.092e-8■■■■■ 34.1
SIN3B-209ENST00000596802 ABCA6Q8N139 1617 aa28.09■■■□□ 2.09
SIN3B-209ENST00000596802 ERCC6L2Q5T890 1561 aa28.09■■■□□ 2.09
SIN3B-209ENST00000596802 KIF20AO95235 890 aa28.08■■■□□ 2.09
SIN3B-209ENST00000596802 PTMAP06454 111 aaKnown RBP28.08■■■□□ 2.09
SIN3B-209ENST00000596802 ZGPATQ8N5A5 531 aaKnown RBP28.08■■■□□ 2.09
SIN3B-209ENST00000596802 TRIM35Q9UPQ4 493 aa28.08■■■□□ 2.09
SIN3B-209ENST00000596802 MED14O60244 1454 aa28.08■■■□□ 2.09
SIN3B-209ENST00000596802 DNTTIP2Q5QJE6 756 aaKnown RBP28.08■■■□□ 2.09
SIN3B-209ENST00000596802 CHAMP1Q96JM3 812 aa28.08■■■□□ 2.09
SIN3B-209ENST00000596802 SLC12A5Q9H2X9 1139 aa28.08■■■□□ 2.09
SIN3B-209ENST00000596802 MYO3AQ8NEV4 1616 aa28.07■■■□□ 2.08
SIN3B-209ENST00000596802 REREQ9P2R6 1566 aa28.07■■■□□ 2.08
SIN3B-209ENST00000596802 ZBTB7CA1YPR0 619 aa28.06■■■□□ 2.08
SIN3B-209ENST00000596802 PPP4R3BQ5MIZ7 849 aa28.06■■■□□ 2.08
SIN3B-209ENST00000596802 HMGN5P82970 282 aaKnown RBP28.06■■■□□ 2.08
SIN3B-209ENST00000596802 ATP2B3Q16720 1220 aa28.06■■■□□ 2.08
SIN3B-209ENST00000596802 GSPT1P15170 499 aaKnown RBP28.05■■■□□ 2.08
SIN3B-209ENST00000596802 TMPOP42166 694 aaKnown RBP28.05■■■□□ 2.08
SIN3B-209ENST00000596802 USP32Q8NFA0 1604 aa28.05■■■□□ 2.08
SIN3B-209ENST00000596802 MAP3K4Q9Y6R4 1608 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms