RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 COL22A1Q8NFW1 1626 aaPredicted RBP24.02■■□□□ 1.44
SMG9-204ENST00000596714 NUTM2BA6NNL0 878 aaPredicted RBP24■■□□□ 1.43
SMG9-204ENST00000596714 NUTM2EB1AL46 878 aaPredicted RBP24■■□□□ 1.43
SMG9-204ENST00000596714 HAP1P54257 671 aaPredicted RBP24■■□□□ 1.43
SMG9-204ENST00000596714 NUTM2AQ8IVF1 878 aaPredicted RBP24■■□□□ 1.43
SMG9-204ENST00000596714 ALS2Q96Q42 1657 aa23.99■■□□□ 1.43
SMG9-204ENST00000596714 MEX3CQ5U5Q3 659 aaKnown RBP23.99■■□□□ 1.43
SMG9-204ENST00000596714 ABTB2Q8N961 1025 aa23.99■■□□□ 1.43
SMG9-204ENST00000596714 A0A1W2PP64 1363 aa23.98■■□□□ 1.43
SMG9-204ENST00000596714 ANKRD36BQ8N2N9 1353 aa23.98■■□□□ 1.43
SMG9-204ENST00000596714 MON2Q7Z3U7 1717 aa23.97■■□□□ 1.43
SMG9-204ENST00000596714 TTC21AQ8NDW8 1320 aa23.97■■□□□ 1.43
SMG9-204ENST00000596714 CD163L1Q9NR16 1453 aa23.97■■□□□ 1.43
SMG9-204ENST00000596714 MED1Q15648 1581 aaPredicted RBP23.96■■□□□ 1.43
SMG9-204ENST00000596714 EDC4Q6P2E9 1401 aaKnown RBP23.95■■□□□ 1.42
SMG9-204ENST00000596714 TTC21BQ7Z4L5 1316 aa23.95■■□□□ 1.42
SMG9-204ENST00000596714 SSH2Q76I76 1423 aa23.94■■□□□ 1.42
SMG9-204ENST00000596714 PLEKHG5O94827 1062 aa23.94■■□□□ 1.42
SMG9-204ENST00000596714 NLRP13Q86W25 1043 aa23.94■■□□□ 1.42
SMG9-204ENST00000596714 NRKQ7Z2Y5 1582 aa23.93■■□□□ 1.42
SMG9-204ENST00000596714 MYOM1P52179 1685 aa23.92■■□□□ 1.42
SMG9-204ENST00000596714 KIF7Q2M1P5 1343 aa23.92■■□□□ 1.42
SMG9-204ENST00000596714 C11orf95C9JLR9 678 aaPredicted RBP23.92■■□□□ 1.42
SMG9-204ENST00000596714 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.92■■□□□ 1.42
SMG9-204ENST00000596714 PHF23Q9BUL5 403 aaPredicted RBP23.92■■□□□ 1.42
SMG9-204ENST00000596714 LRP6O75581 1613 aa23.92■■□□□ 1.42
SMG9-204ENST00000596714 ADAMTS2O95450 1211 aa23.91■■□□□ 1.42
SMG9-204ENST00000596714 NLRP6P59044 892 aa23.91■■□□□ 1.42
SMG9-204ENST00000596714 NUTM2GQ5VZR2 741 aa23.91■■□□□ 1.42
SMG9-204ENST00000596714 CABLES1Q8TDN4 633 aa23.9■■□□□ 1.42
SMG9-204ENST00000596714 PIK3C2AO00443 1686 aa23.87■■□□□ 1.41
SMG9-204ENST00000596714 ABCA3Q99758 1704 aa23.87■■□□□ 1.41
SMG9-204ENST00000596714 C8orf37Q96NL8 207 aa23.86■■□□□ 1.41
SMG9-204ENST00000596714 CCDC7Q96M83 1385 aa23.86■■□□□ 1.41
SMG9-204ENST00000596714 USP19O94966 1318 aa23.84■■□□□ 1.41
SMG9-204ENST00000596714 NGLY1Q96IV0 654 aa23.84■■□□□ 1.41
SMG9-204ENST00000596714 MARF1Q9Y4F3 1742 aaKnown RBP23.84■■□□□ 1.41
SMG9-204ENST00000596714 NSD3Q9BZ95 1437 aa23.84■■□□□ 1.41
SMG9-204ENST00000596714 WASHC2AQ641Q2 1341 aa23.84■■□□□ 1.41
SMG9-204ENST00000596714 NME9Q86XW9 330 aa23.83■■□□□ 1.41
SMG9-204ENST00000596714 KCNH5Q8NCM2 988 aa23.83■■□□□ 1.41
SMG9-204ENST00000596714 PANK3Q9H999 370 aa23.83■■□□□ 1.41
SMG9-204ENST00000596714 PHRF1Q9P1Y6 1649 aaKnown RBP23.83■■□□□ 1.41
SMG9-204ENST00000596714 CRYBG1Q9Y4K1 1723 aa23.82■■□□□ 1.4
SMG9-204ENST00000596714 USP31Q70CQ4 1352 aa23.82■■□□□ 1.4
SMG9-204ENST00000596714 GCP02774 474 aa23.81■■□□□ 1.4
SMG9-204ENST00000596714 COG3Q96JB2 828 aa23.81■■□□□ 1.4
SMG9-204ENST00000596714 CGNL1Q0VF96 1302 aa23.81■■□□□ 1.4
SMG9-204ENST00000596714 ZNF772Q68DY9 489 aaPredicted RBP23.79■■□□□ 1.4
SMG9-204ENST00000596714 CARD14Q9BXL6 1004 aa23.79■■□□□ 1.4
SMG9-204ENST00000596714 PRDM11Q9NQV5 511 aa23.79■■□□□ 1.4
SMG9-204ENST00000596714 AFF2P51816 1311 aa23.79■■□□□ 1.4
SMG9-204ENST00000596714 SLIT3O75094 1523 aa23.79■■□□□ 1.4
SMG9-204ENST00000596714 USP54Q70EL1 1684 aa23.77■■□□□ 1.4
SMG9-204ENST00000596714 ZC3H6P61129 1189 aaKnown RBP23.77■■□□□ 1.4
SMG9-204ENST00000596714 KNSTRNQ9Y448 316 aa23.77■■□□□ 1.4
SMG9-204ENST00000596714 KIF20BQ96Q89 1820 aa23.76■■□□□ 1.39
SMG9-204ENST00000596714 FYB1O15117 783 aa23.76■■□□□ 1.39
SMG9-204ENST00000596714 ZRANB1Q9UGI0 708 aa23.76■■□□□ 1.39
SMG9-204ENST00000596714 KIAA0232Q92628 1395 aa23.76■■□□□ 1.39
SMG9-204ENST00000596714 OVOS2A0A0J9YW53 1432 aa23.76■■□□□ 1.39
SMG9-204ENST00000596714 OVOS2Q6IE36 1432 aa23.76■■□□□ 1.39
SMG9-204ENST00000596714 SOX12O15370 315 aa23.75■■□□□ 1.39
SMG9-204ENST00000596714 FNBP4Q8N3X1 1017 aaPredicted RBP23.75■■□□□ 1.39
SMG9-204ENST00000596714 GGNBP2Q9H3C7 697 aa23.75■■□□□ 1.39
SMG9-204ENST00000596714 USP21Q9UK80 565 aa23.75■■□□□ 1.39
SMG9-204ENST00000596714 CPDO75976 1380 aa23.75■■□□□ 1.39
SMG9-204ENST00000596714 COL14A1Q05707 1796 aaKnown RBP23.74■■□□□ 1.39
SMG9-204ENST00000596714 FAM83GA6ND36 823 aa23.73■■□□□ 1.39
SMG9-204ENST00000596714 ZBTB7CA1YPR0 619 aa23.72■■□□□ 1.39
SMG9-204ENST00000596714 PLCH1Q4KWH8 1693 aa23.7■■□□□ 1.39
SMG9-204ENST00000596714 SLIT2O94813 1529 aa23.7■■□□□ 1.38
SMG9-204ENST00000596714 NSD2O96028 1365 aa23.7■■□□□ 1.38
SMG9-204ENST00000596714 NWD2Q9ULI1 1742 aa23.7■■□□□ 1.38
SMG9-204ENST00000596714 CHRNA2Q15822 529 aa23.69■■□□□ 1.38
SMG9-204ENST00000596714 UNC5CLQ8IV45 518 aa23.69■■□□□ 1.38
SMG9-204ENST00000596714 BTG4Q9NY30 223 aa23.69■■□□□ 1.38
SMG9-204ENST00000596714 NFAT5O94916 1531 aa23.69■■□□□ 1.38
SMG9-204ENST00000596714 RGS17Q9UGC6 210 aaPredicted RBP23.68■■□□□ 1.38
SMG9-204ENST00000596714 TRPC5Q9UL62 973 aaPredicted RBP23.68■■□□□ 1.38
SMG9-204ENST00000596714 ARHGEF25Q86VW2 580 aa23.67■■□□□ 1.38
SMG9-204ENST00000596714 BCL9LQ86UU0 1499 aa23.67■■□□□ 1.38
SMG9-204ENST00000596714 AATKQ6ZMQ8 1374 aa23.66■■□□□ 1.38
SMG9-204ENST00000596714 QTRT2Q9H974 415 aaKnown RBP23.66■■□□□ 1.38
SMG9-204ENST00000596714 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.65■■□□□ 1.38
SMG9-204ENST00000596714 EVA1CP58658 441 aa23.64■■□□□ 1.37
SMG9-204ENST00000596714 ANKRD26Q9UPS8 1709 aa23.64■■□□□ 1.37
SMG9-204ENST00000596714 ABCC6O95255 1503 aa23.64■■□□□ 1.37
SMG9-204ENST00000596714 PER1O15534 1290 aaPredicted RBP23.62■■□□□ 1.37
SMG9-204ENST00000596714 POTEAQ6S8J7 498 aa23.62■■□□□ 1.37
SMG9-204ENST00000596714 CCDC9Q9Y3X0 531 aaKnown RBP23.62■■□□□ 1.37
SMG9-204ENST00000596714 LTN1O94822 1766 aa23.62■■□□□ 1.37
SMG9-204ENST00000596714 LMO7Q8WWI1 1683 aa23.61■■□□□ 1.37
SMG9-204ENST00000596714 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
SMG9-204ENST00000596714 MORC1Q86VD1 984 aa23.61■■□□□ 1.37
SMG9-204ENST00000596714 STRN4Q9NRL3 753 aa23.61■■□□□ 1.37
SMG9-204ENST00000596714 ATRNO75882 1429 aa23.6■■□□□ 1.37
SMG9-204ENST00000596714 RXRBP28702 533 aa23.6■■□□□ 1.37
SMG9-204ENST00000596714 AMPHP49418 695 aa23.6■■□□□ 1.37
SMG9-204ENST00000596714 VPS72Q15906 364 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms