RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 DEFB132Q7Z7B7 95 aa23.45■■□□□ 1.34
LIM2-202ENST00000596399 NRAPQ86VF7 1730 aa23.45■■□□□ 1.34
LIM2-202ENST00000596399 NBPF1Q3BBV0 1214 aa23.44■■□□□ 1.34
LIM2-202ENST00000596399 CDK19Q9BWU1 502 aa23.44■■□□□ 1.34
LIM2-202ENST00000596399 BLMP54132 1417 aaPredicted RBP23.43■■□□□ 1.34
LIM2-202ENST00000596399 FAM98CQ17RN3 349 aaKnown RBP23.43■■□□□ 1.34
LIM2-202ENST00000596399 KRT27Q7Z3Y8 459 aa23.43■■□□□ 1.34
LIM2-202ENST00000596399 CRYBG1Q9Y4K1 1723 aa23.42■■□□□ 1.34
LIM2-202ENST00000596399 A0A0G2JS52 829 aa23.42■■□□□ 1.34
LIM2-202ENST00000596399 MYT1Q01538 1121 aa23.42■■□□□ 1.34
LIM2-202ENST00000596399 NUTM2GQ5VZR2 741 aa23.41■■□□□ 1.34
LIM2-202ENST00000596399 COL14A1Q05707 1796 aaKnown RBP23.41■■□□□ 1.34
LIM2-202ENST00000596399 ITSN1Q15811 1721 aa23.39■■□□□ 1.33
LIM2-202ENST00000596399 FAM182BQ5T319 152 aa23.38■■□□□ 1.33
LIM2-202ENST00000596399 CHRNA2Q15822 529 aa23.37■■□□□ 1.33
LIM2-202ENST00000596399 PRDM11Q9NQV5 511 aa23.37■■□□□ 1.33
LIM2-202ENST00000596399 ACEP12821 1306 aa23.36■■□□□ 1.33
LIM2-202ENST00000596399 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
LIM2-202ENST00000596399 SF3B2Q13435 895 aaKnown RBP23.35■■□□□ 1.33
LIM2-202ENST00000596399 NBPF8Q3BBV2 869 aa23.35■■□□□ 1.33
LIM2-202ENST00000596399 KIAA1210Q9ULL0 1709 aa23.35■■□□□ 1.33
LIM2-202ENST00000596399 TOPAZ1Q8N9V7 1692 aa23.35■■□□□ 1.33
LIM2-202ENST00000596399 SPATA31A5Q5VU36 1347 aa23.34■■□□□ 1.33
LIM2-202ENST00000596399 SPATA31A7Q8IWB4 1347 aa23.34■■□□□ 1.33
LIM2-202ENST00000596399 ZC3H6P61129 1189 aaKnown RBP23.34■■□□□ 1.33
LIM2-202ENST00000596399 POLR3AO14802 1390 aaPredicted RBP23.33■■□□□ 1.33
LIM2-202ENST00000596399 CCDC61Q9Y6R9 512 aa23.33■■□□□ 1.33
LIM2-202ENST00000596399 PHRF1Q9P1Y6 1649 aaKnown RBP23.33■■□□□ 1.32
LIM2-202ENST00000596399 STRN4Q9NRL3 753 aa23.31■■□□□ 1.32
LIM2-202ENST00000596399 PLEKHG3A1L390 1219 aa23.3■■□□□ 1.32
LIM2-202ENST00000596399 CABP2Q9NPB3 220 aa23.3■■□□□ 1.32
LIM2-202ENST00000596399 SRPK2P78362 688 aaKnown RBP23.28■■□□□ 1.32
LIM2-202ENST00000596399 CENPJQ9HC77 1338 aaPredicted RBP23.28■■□□□ 1.32
LIM2-202ENST00000596399 ABTB2Q8N961 1025 aa23.27■■□□□ 1.32
LIM2-202ENST00000596399 L3MBTL2Q969R5 705 aa23.27■■□□□ 1.32
LIM2-202ENST00000596399 THSD7AQ9UPZ6 1657 aa23.27■■□□□ 1.32
LIM2-202ENST00000596399 SPATA31A1Q5TZJ5 1347 aa23.27■■□□□ 1.32
LIM2-202ENST00000596399 SIN3AQ96ST3 1273 aa23.26■■□□□ 1.31
LIM2-202ENST00000596399 USP35Q9P2H5 1018 aa23.26■■□□□ 1.31
LIM2-202ENST00000596399 PPIP5K1Q6PFW1 1433 aa23.25■■□□□ 1.31
LIM2-202ENST00000596399 EN1Q05925 392 aaPredicted RBP23.24■■□□□ 1.31
LIM2-202ENST00000596399 NRKQ7Z2Y5 1582 aa23.23■■□□□ 1.31
LIM2-202ENST00000596399 PSDA5PKW4 1024 aaPredicted RBP23.23■■□□□ 1.31
LIM2-202ENST00000596399 BAG6P46379 1132 aa23.23■■□□□ 1.31
LIM2-202ENST00000596399 QRICH2Q9H0J4 1663 aa23.22■■□□□ 1.31
LIM2-202ENST00000596399 CAMTA1Q9Y6Y1 1673 aa23.22■■□□□ 1.31
LIM2-202ENST00000596399 EVA1CP58658 441 aa23.21■■□□□ 1.31
LIM2-202ENST00000596399 LARP1Q6PKG0 1096 aaKnown RBP23.21■■□□□ 1.31
LIM2-202ENST00000596399 CABP1Q9NZU7 370 aa23.21■■□□□ 1.31
LIM2-202ENST00000596399 SSH2Q76I76 1423 aa23.2■■□□□ 1.3
LIM2-202ENST00000596399 USP19O94966 1318 aa23.2■■□□□ 1.3
LIM2-202ENST00000596399 NEUROD1Q13562 356 aa23.19■■□□□ 1.3
LIM2-202ENST00000596399 RGPD1P0DJD0 1748 aa23.19■■□□□ 1.3
LIM2-202ENST00000596399 GCP02774 474 aa23.18■■□□□ 1.3
LIM2-202ENST00000596399 LMO7Q8WWI1 1683 aa23.17■■□□□ 1.3
LIM2-202ENST00000596399 TNS1Q9HBL0 1735 aaKnown RBP23.16■■□□□ 1.3
LIM2-202ENST00000596399 CPDO75976 1380 aa23.16■■□□□ 1.3
LIM2-202ENST00000596399 ZBTB7CA1YPR0 619 aa23.16■■□□□ 1.3
LIM2-202ENST00000596399 TRIM37O94972 964 aa23.16■■□□□ 1.3
LIM2-202ENST00000596399 NLRP13Q86W25 1043 aa23.16■■□□□ 1.3
LIM2-202ENST00000596399 EZH2Q15910 746 aaKnown RBP23.15■■□□□ 1.3
LIM2-202ENST00000596399 TRPM1Q7Z4N2 1603 aa23.15■■□□□ 1.3
LIM2-202ENST00000596399 USP6P35125 1406 aa23.14■■□□□ 1.29
LIM2-202ENST00000596399 NLRP6P59044 892 aa23.13■■□□□ 1.29
LIM2-202ENST00000596399 BARGINQ6ZT62 677 aa23.13■■□□□ 1.29
LIM2-202ENST00000596399 FAM196AQ6ZSG2 479 aa23.12■■□□□ 1.29
LIM2-202ENST00000596399 TCP11L2Q8N4U5 519 aa23.12■■□□□ 1.29
LIM2-202ENST00000596399 R3HDM1Q15032 1099 aaKnown RBP23.11■■□□□ 1.29
LIM2-202ENST00000596399 COL5A2P05997 1499 aaPredicted RBP23.11■■□□□ 1.29
LIM2-202ENST00000596399 PDE3BQ13370 1112 aa23.1■■□□□ 1.29
LIM2-202ENST00000596399 CAMKK2Q96RR4 588 aa23.1■■□□□ 1.29
LIM2-202ENST00000596399 ROCK2O75116 1388 aaKnown RBP23.1■■□□□ 1.29
LIM2-202ENST00000596399 EVC2Q86UK5 1308 aa23.09■■□□□ 1.29
LIM2-202ENST00000596399 DISP2A7MBM2 1401 aa23.09■■□□□ 1.29
LIM2-202ENST00000596399 APBA3O96018 575 aa23.09■■□□□ 1.29
LIM2-202ENST00000596399 PIK3C2AO00443 1686 aa23.08■■□□□ 1.29
LIM2-202ENST00000596399 LRP5O75197 1615 aa23.08■■□□□ 1.28
LIM2-202ENST00000596399 BRD4O60885 1362 aaPredicted RBP23.07■■□□□ 1.28
LIM2-202ENST00000596399 SLIT3O75094 1523 aa23.07■■□□□ 1.28
LIM2-202ENST00000596399 AXIN2Q9Y2T1 843 aa23.05■■□□□ 1.28
LIM2-202ENST00000596399 SOX12O15370 315 aa23.04■■□□□ 1.28
LIM2-202ENST00000596399 THRAP3Q9Y2W1 955 aaKnown RBP23.04■■□□□ 1.28
LIM2-202ENST00000596399 CRB1P82279 1406 aa23.04■■□□□ 1.28
LIM2-202ENST00000596399 AATKQ6ZMQ8 1374 aa23.03■■□□□ 1.28
LIM2-202ENST00000596399 TTC21BQ7Z4L5 1316 aa23.03■■□□□ 1.28
LIM2-202ENST00000596399 COL18A1P39060 1754 aa23.01■■□□□ 1.27
LIM2-202ENST00000596399 PARP4Q9UKK3 1724 aaKnown RBP23.01■■□□□ 1.27
LIM2-202ENST00000596399 AKAP12Q02952 1782 aa22.99■■□□□ 1.27
LIM2-202ENST00000596399 TOM1L2Q6ZVM7 507 aa22.99■■□□□ 1.27
LIM2-202ENST00000596399 ARHGEF25Q86VW2 580 aa22.98■■□□□ 1.27
LIM2-202ENST00000596399 ZNF692Q9BU19 519 aaPredicted RBP22.98■■□□□ 1.27
LIM2-202ENST00000596399 CPSF1Q10570 1443 aaKnown RBP22.98■■□□□ 1.27
LIM2-202ENST00000596399 RREB1Q92766 1687 aa22.97■■□□□ 1.27
LIM2-202ENST00000596399 PTF1AQ7RTS3 328 aa22.96■■□□□ 1.27
LIM2-202ENST00000596399 KTN1Q86UP2 1357 aaKnown RBP22.96■■□□□ 1.27
LIM2-202ENST00000596399 LRRC37A3O60309 1634 aa22.96■■□□□ 1.27
LIM2-202ENST00000596399 NUP188Q5SRE5 1749 aa22.96■■□□□ 1.27
LIM2-202ENST00000596399 RGPD5Q99666 1765 aa22.96■■□□□ 1.27
LIM2-202ENST00000596399 WDR17Q8IZU2 1322 aa22.95■■□□□ 1.26
LIM2-202ENST00000596399 PARD3Q8TEW0 1356 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms