RNA–Protein interactions for RNA: ENST00000595984.5

COPE-205, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 434 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-205ENST00000595984 PUS7Q96PZ0 661 aaKnown RBP17.18■□□□□ 0.34
COPE-205ENST00000595984 USP6P35125 1406 aa17.18■□□□□ 0.34
COPE-205ENST00000595984 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
COPE-205ENST00000595984 ADAMTS2O95450 1211 aa17.17■□□□□ 0.34
COPE-205ENST00000595984 CD163L1Q9NR16 1453 aa17.17■□□□□ 0.34
COPE-205ENST00000595984 CPSF1Q10570 1443 aaKnown RBP17.16■□□□□ 0.34
COPE-205ENST00000595984 PLEKHG5O94827 1062 aa17.16■□□□□ 0.34
COPE-205ENST00000595984 TMF1P82094 1093 aa17.16■□□□□ 0.34
COPE-205ENST00000595984 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
COPE-205ENST00000595984 PIK3C2AO00443 1686 aa17.16■□□□□ 0.34
COPE-205ENST00000595984 MYOM1P52179 1685 aa17.16■□□□□ 0.34
COPE-205ENST00000595984 SSH2Q76I76 1423 aa17.15■□□□□ 0.34
COPE-205ENST00000595984 HSPA5P11021 654 aaKnown RBP17.15■□□□□ 0.34
COPE-205ENST00000595984 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
COPE-205ENST00000595984 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
COPE-205ENST00000595984 TMC1Q8TDI8 760 aa17.14■□□□□ 0.33
COPE-205ENST00000595984 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
COPE-205ENST00000595984 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
COPE-205ENST00000595984 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
COPE-205ENST00000595984 NUTM2GQ5VZR2 741 aa17.12■□□□□ 0.33
COPE-205ENST00000595984 ZNF692Q9BU19 519 aaPredicted RBP17.12■□□□□ 0.33
COPE-205ENST00000595984 AFF2P51816 1311 aa17.12■□□□□ 0.33
COPE-205ENST00000595984 KTN1Q86UP2 1357 aaKnown RBP17.12■□□□□ 0.33
COPE-205ENST00000595984 HAP1P54257 671 aaPredicted RBP17.11■□□□□ 0.33
COPE-205ENST00000595984 POTEAQ6S8J7 498 aa17.11■□□□□ 0.33
COPE-205ENST00000595984 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
COPE-205ENST00000595984 NINLQ9Y2I6 1382 aa17.11■□□□□ 0.33
COPE-205ENST00000595984 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
COPE-205ENST00000595984 NGLY1Q96IV0 654 aa17.1■□□□□ 0.33
COPE-205ENST00000595984 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
COPE-205ENST00000595984 NWD2Q9ULI1 1742 aa17.1■□□□□ 0.33
COPE-205ENST00000595984 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
COPE-205ENST00000595984 TTC21BQ7Z4L5 1316 aa17.09■□□□□ 0.33
COPE-205ENST00000595984 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
COPE-205ENST00000595984 COL14A1Q05707 1796 aaKnown RBP17.08■□□□□ 0.33
COPE-205ENST00000595984 ZNF772Q68DY9 489 aaPredicted RBP17.08■□□□□ 0.32
COPE-205ENST00000595984 HDGFL2Q7Z4V5 671 aaPredicted RBP17.08■□□□□ 0.32
COPE-205ENST00000595984 USP19O94966 1318 aa17.07■□□□□ 0.32
COPE-205ENST00000595984 TTC21AQ8NDW8 1320 aa17.07■□□□□ 0.32
COPE-205ENST00000595984 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
COPE-205ENST00000595984 NRAPQ86VF7 1730 aa17.07■□□□□ 0.32
COPE-205ENST00000595984 SLIT3O75094 1523 aa17.06■□□□□ 0.32
COPE-205ENST00000595984 SLIT2O94813 1529 aa17.06■□□□□ 0.32
COPE-205ENST00000595984 EDC4Q6P2E9 1401 aaKnown RBP17.06■□□□□ 0.32
COPE-205ENST00000595984 NLRP13Q86W25 1043 aa17.06■□□□□ 0.32
COPE-205ENST00000595984 FNBP4Q8N3X1 1017 aaPredicted RBP17.06■□□□□ 0.32
COPE-205ENST00000595984 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
COPE-205ENST00000595984 ANKRD36BQ8N2N9 1353 aa17.05■□□□□ 0.32
COPE-205ENST00000595984 NLRP6P59044 892 aa17.05■□□□□ 0.32
COPE-205ENST00000595984 USP21Q9UK80 565 aa17.05■□□□□ 0.32
COPE-205ENST00000595984 FAM83GA6ND36 823 aa17.04■□□□□ 0.32
COPE-205ENST00000595984 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
COPE-205ENST00000595984 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
COPE-205ENST00000595984 KIAA0232Q92628 1395 aa17.02■□□□□ 0.32
COPE-205ENST00000595984 C11orf95C9JLR9 678 aaPredicted RBP17.02■□□□□ 0.32
COPE-205ENST00000595984 NME9Q86XW9 330 aa17.02■□□□□ 0.32
COPE-205ENST00000595984 QTRT2Q9H974 415 aaKnown RBP17.02■□□□□ 0.32
COPE-205ENST00000595984 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.32
COPE-205ENST00000595984 ATRNO75882 1429 aa17.02■□□□□ 0.31
COPE-205ENST00000595984 LMO7Q8WWI1 1683 aa17.01■□□□□ 0.31
COPE-205ENST00000595984 GCP02774 474 aa17.01■□□□□ 0.31
COPE-205ENST00000595984 ZC3H6P61129 1189 aaKnown RBP17.01■□□□□ 0.31
COPE-205ENST00000595984 POLR3GLQ9BT43 218 aa17.01■□□□□ 0.31
COPE-205ENST00000595984 USP31Q70CQ4 1352 aa17.01■□□□□ 0.31
COPE-205ENST00000595984 RGPD5Q99666 1765 aa17■□□□□ 0.31
COPE-205ENST00000595984 PRDM11Q9NQV5 511 aa17■□□□□ 0.31
COPE-205ENST00000595984 NFAT5O94916 1531 aa17■□□□□ 0.31
COPE-205ENST00000595984 LTN1O94822 1766 aa17■□□□□ 0.31
COPE-205ENST00000595984 COL18A1P39060 1754 aa17■□□□□ 0.31
COPE-205ENST00000595984 CHRNA2Q15822 529 aa16.99■□□□□ 0.31
COPE-205ENST00000595984 UNC5CLQ8IV45 518 aa16.99■□□□□ 0.31
COPE-205ENST00000595984 TRPC5Q9UL62 973 aaPredicted RBP16.99■□□□□ 0.31
COPE-205ENST00000595984 CPDO75976 1380 aa16.99■□□□□ 0.31
COPE-205ENST00000595984 OVOS2A0A0J9YW53 1432 aa16.98■□□□□ 0.31
COPE-205ENST00000595984 OVOS2Q6IE36 1432 aa16.98■□□□□ 0.31
COPE-205ENST00000595984 GLI3P10071 1580 aa16.98■□□□□ 0.31
COPE-205ENST00000595984 RXRBP28702 533 aa16.97■□□□□ 0.31
COPE-205ENST00000595984 CARD14Q9BXL6 1004 aa16.97■□□□□ 0.31
COPE-205ENST00000595984 BTG4Q9NY30 223 aa16.97■□□□□ 0.31
COPE-205ENST00000595984 RBM6P78332 1123 aaKnown RBP16.96■□□□□ 0.31
COPE-205ENST00000595984 CAMTA1Q9Y6Y1 1673 aa16.96■□□□□ 0.31
COPE-205ENST00000595984 NSD3Q9BZ95 1437 aa16.96■□□□□ 0.3
COPE-205ENST00000595984 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.3
COPE-205ENST00000595984 CDK12Q9NYV4 1490 aaPredicted RBP16.95■□□□□ 0.3
COPE-205ENST00000595984 SOX12O15370 315 aa16.95■□□□□ 0.3
COPE-205ENST00000595984 KCNH5Q8NCM2 988 aa16.95■□□□□ 0.3
COPE-205ENST00000595984 ANKRD26Q9UPS8 1709 aa16.94■□□□□ 0.3
COPE-205ENST00000595984 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
COPE-205ENST00000595984 VPS72Q15906 364 aa16.93■□□□□ 0.3
COPE-205ENST00000595984 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
COPE-205ENST00000595984 RGS12O14924 1447 aa16.93■□□□□ 0.3
COPE-205ENST00000595984 FYB1O15117 783 aa16.92■□□□□ 0.3
COPE-205ENST00000595984 ARHGEF25Q86VW2 580 aa16.92■□□□□ 0.3
COPE-205ENST00000595984 BRWD3Q6RI45 1802 aa16.91■□□□□ 0.3
COPE-205ENST00000595984 AATKQ6ZMQ8 1374 aa16.91■□□□□ 0.3
COPE-205ENST00000595984 COG3Q96JB2 828 aa16.91■□□□□ 0.3
COPE-205ENST00000595984 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
COPE-205ENST00000595984 COL5A2P05997 1499 aaPredicted RBP16.91■□□□□ 0.3
COPE-205ENST00000595984 ABCC6O95255 1503 aa16.91■□□□□ 0.3
COPE-205ENST00000595984 PANK3Q9H999 370 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms