RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 PAK3O75914 559 aaPredicted RBP25.79■■□□□ 1.72
PNKP-206ENST00000595792 CDK19Q9BWU1 502 aa25.79■■□□□ 1.72
PNKP-206ENST00000595792 VPS72Q15906 364 aa25.77■■□□□ 1.72
PNKP-206ENST00000595792 CCDC9Q9Y3X0 531 aaKnown RBP25.77■■□□□ 1.72
PNKP-206ENST00000595792 NEUROD1Q13562 356 aa25.76■■□□□ 1.71
PNKP-206ENST00000595792 COL14A1Q05707 1796 aaKnown RBP25.76■■□□□ 1.71
PNKP-206ENST00000595792 QRICH2Q9H0J4 1663 aa25.75■■□□□ 1.71
PNKP-206ENST00000595792 PHRF1Q9P1Y6 1649 aaKnown RBP25.75■■□□□ 1.71
PNKP-206ENST00000595792 TRIM26Q12899 539 aaPredicted RBP25.73■■□□□ 1.71
PNKP-206ENST00000595792 SEPT12Q8IYM1 358 aa25.72■■□□□ 1.71
PNKP-206ENST00000595792 BTG4Q9NY30 223 aa25.72■■□□□ 1.71
PNKP-206ENST00000595792 ACEP12821 1306 aa25.71■■□□□ 1.71
PNKP-206ENST00000595792 POLR3AO14802 1390 aaPredicted RBP25.7■■□□□ 1.71
PNKP-206ENST00000595792 CENPJQ9HC77 1338 aaPredicted RBP25.7■■□□□ 1.71
PNKP-206ENST00000595792 NUTM2GQ5VZR2 741 aa25.7■■□□□ 1.7
PNKP-206ENST00000595792 CCDC61Q9Y6R9 512 aa25.68■■□□□ 1.7
PNKP-206ENST00000595792 SRPK2P78362 688 aaKnown RBP25.66■■□□□ 1.7
PNKP-206ENST00000595792 NBPF8Q3BBV2 869 aa25.66■■□□□ 1.7
PNKP-206ENST00000595792 CABP2Q9NPB3 220 aa25.66■■□□□ 1.7
PNKP-206ENST00000595792 KIAA0232Q92628 1395 aa25.66■■□□□ 1.7
PNKP-206ENST00000595792 PPIP5K1Q6PFW1 1433 aa25.65■■□□□ 1.7
PNKP-206ENST00000595792 PRDM11Q9NQV5 511 aa25.65■■□□□ 1.7
PNKP-206ENST00000595792 NRKQ7Z2Y5 1582 aa25.65■■□□□ 1.7
PNKP-206ENST00000595792 A0A0G2JS52 829 aa25.64■■□□□ 1.7
PNKP-206ENST00000595792 PLEKHG3A1L390 1219 aa25.64■■□□□ 1.7
PNKP-206ENST00000595792 MYT1Q01538 1121 aa25.64■■□□□ 1.7
PNKP-206ENST00000595792 CHRNA2Q15822 529 aa25.64■■□□□ 1.7
PNKP-206ENST00000595792 FAM98CQ17RN3 349 aaKnown RBP25.64■■□□□ 1.7
PNKP-206ENST00000595792 ONECUT3O60422 494 aaPredicted RBP25.63■■□□□ 1.69
PNKP-206ENST00000595792 BLMP54132 1417 aaPredicted RBP25.62■■□□□ 1.69
PNKP-206ENST00000595792 ZC3H6P61129 1189 aaKnown RBP25.61■■□□□ 1.69
PNKP-206ENST00000595792 KRT27Q7Z3Y8 459 aa25.6■■□□□ 1.69
PNKP-206ENST00000595792 CCDC125Q86Z20 511 aa25.59■■□□□ 1.69
PNKP-206ENST00000595792 SPATA31A5Q5VU36 1347 aa25.59■■□□□ 1.69
PNKP-206ENST00000595792 SPATA31A7Q8IWB4 1347 aa25.59■■□□□ 1.69
PNKP-206ENST00000595792 THSD7AQ9UPZ6 1657 aa25.58■■□□□ 1.69
PNKP-206ENST00000595792 ROCK2O75116 1388 aaKnown RBP25.58■■□□□ 1.69
PNKP-206ENST00000595792 DEFB132Q7Z7B7 95 aa25.57■■□□□ 1.68
PNKP-206ENST00000595792 ABTB2Q8N961 1025 aa25.57■■□□□ 1.68
PNKP-206ENST00000595792 STRN4Q9NRL3 753 aa25.56■■□□□ 1.68
PNKP-206ENST00000595792 FAM182BQ5T319 152 aa25.54■■□□□ 1.68
PNKP-206ENST00000595792 CABP1Q9NZU7 370 aa25.54■■□□□ 1.68
PNKP-206ENST00000595792 USP19O94966 1318 aa25.54■■□□□ 1.68
PNKP-206ENST00000595792 LMO7Q8WWI1 1683 aa25.54■■□□□ 1.68
PNKP-206ENST00000595792 USP6P35125 1406 aa25.53■■□□□ 1.68
PNKP-206ENST00000595792 CAMTA1Q9Y6Y1 1673 aa25.52■■□□□ 1.68
PNKP-206ENST00000595792 SRCAPQ6ZRS2 3230 aa25.52■■□□□ 1.68
PNKP-206ENST00000595792 ZRANB1Q9UGI0 708 aa25.51■■□□□ 1.67
PNKP-206ENST00000595792 SPATA31A1Q5TZJ5 1347 aa25.51■■□□□ 1.67
PNKP-206ENST00000595792 PIK3C2AO00443 1686 aa25.51■■□□□ 1.67
PNKP-206ENST00000595792 SSH2Q76I76 1423 aa25.5■■□□□ 1.67
PNKP-206ENST00000595792 EVC2Q86UK5 1308 aa25.49■■□□□ 1.67
PNKP-206ENST00000595792 SF3B2Q13435 895 aaKnown RBP25.49■■□□□ 1.67
PNKP-206ENST00000595792 TONSLQ96HA7 1378 aa25.48■■□□□ 1.67
PNKP-206ENST00000595792 USP35Q9P2H5 1018 aa25.48■■□□□ 1.67
PNKP-206ENST00000595792 CPDO75976 1380 aa25.47■■□□□ 1.67
PNKP-206ENST00000595792 NLRP13Q86W25 1043 aa25.47■■□□□ 1.67
PNKP-206ENST00000595792 AKAP12Q02952 1782 aa25.46■■□□□ 1.67
PNKP-206ENST00000595792 GCP02774 474 aa25.46■■□□□ 1.67
PNKP-206ENST00000595792 SLIT3O75094 1523 aa25.45■■□□□ 1.66
PNKP-206ENST00000595792 RGPD1P0DJD0 1748 aa25.45■■□□□ 1.66
PNKP-206ENST00000595792 TNS1Q9HBL0 1735 aaKnown RBP25.44■■□□□ 1.66
PNKP-206ENST00000595792 ZBTB7CA1YPR0 619 aa25.44■■□□□ 1.66
PNKP-206ENST00000595792 EVA1CP58658 441 aa25.44■■□□□ 1.66
PNKP-206ENST00000595792 LARP1Q6PKG0 1096 aaKnown RBP25.44■■□□□ 1.66
PNKP-206ENST00000595792 BRD4O60885 1362 aaPredicted RBP25.44■■□□□ 1.66
PNKP-206ENST00000595792 COL5A2P05997 1499 aaPredicted RBP25.42■■□□□ 1.66
PNKP-206ENST00000595792 NLRP6P59044 892 aa25.42■■□□□ 1.66
PNKP-206ENST00000595792 CARD11Q9BXL7 1154 aa25.39■■□□□ 1.66
PNKP-206ENST00000595792 BAG6P46379 1132 aa25.38■■□□□ 1.65
PNKP-206ENST00000595792 TTC21BQ7Z4L5 1316 aa25.37■■□□□ 1.65
PNKP-206ENST00000595792 COL18A1P39060 1754 aa25.37■■□□□ 1.65
PNKP-206ENST00000595792 MON2Q7Z3U7 1717 aa25.37■■□□□ 1.65
PNKP-206ENST00000595792 SBNO2Q9Y2G9 1366 aa25.36■■□□□ 1.65
PNKP-206ENST00000595792 EN1Q05925 392 aaPredicted RBP25.36■■□□□ 1.65
PNKP-206ENST00000595792 CPSF1Q10570 1443 aaKnown RBP25.36■■□□□ 1.65
PNKP-206ENST00000595792 BARGINQ6ZT62 677 aa25.35■■□□□ 1.65
PNKP-206ENST00000595792 SOX12O15370 315 aa25.34■■□□□ 1.65
PNKP-206ENST00000595792 TCP11L2Q8N4U5 519 aa25.34■■□□□ 1.65
PNKP-206ENST00000595792 AATKQ6ZMQ8 1374 aa25.33■■□□□ 1.65
PNKP-206ENST00000595792 KTN1Q86UP2 1357 aaKnown RBP25.33■■□□□ 1.65
PNKP-206ENST00000595792 PARP4Q9UKK3 1724 aaKnown RBP25.33■■□□□ 1.65
PNKP-206ENST00000595792 CRB1P82279 1406 aa25.32■■□□□ 1.64
PNKP-206ENST00000595792 TRIM37O94972 964 aa25.32■■□□□ 1.64
PNKP-206ENST00000595792 RGPD5Q99666 1765 aa25.31■■□□□ 1.64
PNKP-206ENST00000595792 PSDA5PKW4 1024 aaPredicted RBP25.31■■□□□ 1.64
PNKP-206ENST00000595792 ZNF692Q9BU19 519 aaPredicted RBP25.31■■□□□ 1.64
PNKP-206ENST00000595792 CD163L1Q9NR16 1453 aa25.31■■□□□ 1.64
PNKP-206ENST00000595792 DISP2A7MBM2 1401 aa25.3■■□□□ 1.64
PNKP-206ENST00000595792 AXIN2Q9Y2T1 843 aa25.3■■□□□ 1.64
PNKP-206ENST00000595792 NFAT5O94916 1531 aa25.3■■□□□ 1.64
PNKP-206ENST00000595792 LRRC37A3O60309 1634 aa25.3■■□□□ 1.64
PNKP-206ENST00000595792 WNK3Q9BYP7 1800 aa25.29■■□□□ 1.64
PNKP-206ENST00000595792 PDE3BQ13370 1112 aa25.29■■□□□ 1.64
PNKP-206ENST00000595792 FAM196AQ6ZSG2 479 aa25.29■■□□□ 1.64
PNKP-206ENST00000595792 TTC21AQ8NDW8 1320 aa25.29■■□□□ 1.64
PNKP-206ENST00000595792 PCGF6Q9BYE7 350 aa25.28■■□□□ 1.64
PNKP-206ENST00000595792 EZH2Q15910 746 aaKnown RBP25.27■■□□□ 1.64
PNKP-206ENST00000595792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.27■■□□□ 1.64
PNKP-206ENST00000595792 THRAP3Q9Y2W1 955 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms