RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 CABLES1Q8TDN4 633 aa19.36■□□□□ 0.69
SHKBP1-207ENST00000595631 PIK3C2AO00443 1686 aa19.36■□□□□ 0.69
SHKBP1-207ENST00000595631 CD163L1Q9NR16 1453 aa19.35■□□□□ 0.69
SHKBP1-207ENST00000595631 USP6P35125 1406 aa19.35■□□□□ 0.69
SHKBP1-207ENST00000595631 ARHGEF10O15013 1369 aa19.35■□□□□ 0.69
SHKBP1-207ENST00000595631 EIF4G2P78344 907 aaKnown RBP eCLIP19.34■□□□□ 0.69
SHKBP1-207ENST00000595631 TMF1P82094 1093 aa19.34■□□□□ 0.69
SHKBP1-207ENST00000595631 TMC1Q8TDI8 760 aa19.34■□□□□ 0.69
SHKBP1-207ENST00000595631 RGS17Q9UGC6 210 aaPredicted RBP19.34■□□□□ 0.69
SHKBP1-207ENST00000595631 NUTM2GQ5VZR2 741 aa19.33■□□□□ 0.68
SHKBP1-207ENST00000595631 SLC12A5Q9H2X9 1139 aa19.33■□□□□ 0.68
SHKBP1-207ENST00000595631 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-207ENST00000595631 PLCH1Q4KWH8 1693 aa19.32■□□□□ 0.68
SHKBP1-207ENST00000595631 SSH2Q76I76 1423 aa19.32■□□□□ 0.68
SHKBP1-207ENST00000595631 C8orf37Q96NL8 207 aa19.31■□□□□ 0.68
SHKBP1-207ENST00000595631 PUS7Q96PZ0 661 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-207ENST00000595631 KTN1Q86UP2 1357 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-207ENST00000595631 A0A1W2PP64 1363 aa19.29■□□□□ 0.68
SHKBP1-207ENST00000595631 SLC24A1O60721 1099 aa19.28■□□□□ 0.68
SHKBP1-207ENST00000595631 HAP1P54257 671 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-207ENST00000595631 AFF2P51816 1311 aa19.27■□□□□ 0.68
SHKBP1-207ENST00000595631 ABTB2Q8N961 1025 aa19.27■□□□□ 0.68
SHKBP1-207ENST00000595631 TTC21BQ7Z4L5 1316 aa19.26■□□□□ 0.67
SHKBP1-207ENST00000595631 POTEAQ6S8J7 498 aa19.26■□□□□ 0.67
SHKBP1-207ENST00000595631 ILDR2Q71H61 639 aa19.26■□□□□ 0.67
SHKBP1-207ENST00000595631 NGLY1Q96IV0 654 aa19.26■□□□□ 0.67
SHKBP1-207ENST00000595631 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-207ENST00000595631 BRD4O60885 1362 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-207ENST00000595631 USP54Q70EL1 1684 aa19.25■□□□□ 0.67
SHKBP1-207ENST00000595631 NINLQ9Y2I6 1382 aa19.25■□□□□ 0.67
SHKBP1-207ENST00000595631 POLR3GLQ9BT43 218 aa19.25■□□□□ 0.67
SHKBP1-207ENST00000595631 NRAPQ86VF7 1730 aa19.25■□□□□ 0.67
SHKBP1-207ENST00000595631 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-207ENST00000595631 NWD2Q9ULI1 1742 aa19.25■□□□□ 0.67
SHKBP1-207ENST00000595631 COL14A1Q05707 1796 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-207ENST00000595631 KIF20BQ96Q89 1820 aa19.24■□□□□ 0.67
SHKBP1-207ENST00000595631 HDGFL2Q7Z4V5 671 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-207ENST00000595631 C11orf95C9JLR9 678 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-207ENST00000595631 CDCA8Q53HL2 280 aa19.23■□□□□ 0.67
SHKBP1-207ENST00000595631 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.23■□□□□ 0.67
SHKBP1-207ENST00000595631 TERF2IPQ9NYB0 399 aa19.23■□□□□ 0.67
SHKBP1-207ENST00000595631 SLIT3O75094 1523 aa19.23■□□□□ 0.67
SHKBP1-207ENST00000595631 ZRANB1Q9UGI0 708 aa19.22■□□□□ 0.67
SHKBP1-207ENST00000595631 EDC4Q6P2E9 1401 aaKnown RBP19.22■□□□□ 0.67
SHKBP1-207ENST00000595631 USP19O94966 1318 aa19.22■□□□□ 0.67
SHKBP1-207ENST00000595631 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
SHKBP1-207ENST00000595631 NLRP6P59044 892 aa19.21■□□□□ 0.67
SHKBP1-207ENST00000595631 TTC21AQ8NDW8 1320 aa19.21■□□□□ 0.67
SHKBP1-207ENST00000595631 SLIT2O94813 1529 aa19.2■□□□□ 0.66
SHKBP1-207ENST00000595631 RGPD5Q99666 1765 aa19.2■□□□□ 0.66
SHKBP1-207ENST00000595631 NLRP13Q86W25 1043 aa19.2■□□□□ 0.66
SHKBP1-207ENST00000595631 NME9Q86XW9 330 aa19.2■□□□□ 0.66
SHKBP1-207ENST00000595631 BCL9LQ86UU0 1499 aa19.2■□□□□ 0.66
SHKBP1-207ENST00000595631 LTN1O94822 1766 aa19.19■□□□□ 0.66
SHKBP1-207ENST00000595631 ZNF772Q68DY9 489 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-207ENST00000595631 FNBP4Q8N3X1 1017 aaPredicted RBP19.19■□□□□ 0.66
SHKBP1-207ENST00000595631 USP21Q9UK80 565 aa19.19■□□□□ 0.66
SHKBP1-207ENST00000595631 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
SHKBP1-207ENST00000595631 FAM83GA6ND36 823 aa19.18■□□□□ 0.66
SHKBP1-207ENST00000595631 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-207ENST00000595631 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
SHKBP1-207ENST00000595631 COL18A1P39060 1754 aa19.16■□□□□ 0.66
SHKBP1-207ENST00000595631 CHRNA2Q15822 529 aa19.16■□□□□ 0.66
SHKBP1-207ENST00000595631 NFAT5O94916 1531 aa19.15■□□□□ 0.66
SHKBP1-207ENST00000595631 SOX12O15370 315 aa19.15■□□□□ 0.66
SHKBP1-207ENST00000595631 GCP02774 474 aa19.15■□□□□ 0.66
SHKBP1-207ENST00000595631 PRDM11Q9NQV5 511 aa19.15■□□□□ 0.66
SHKBP1-207ENST00000595631 ATRNO75882 1429 aa19.15■□□□□ 0.66
SHKBP1-207ENST00000595631 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-207ENST00000595631 KIF7Q2M1P5 1343 aa19.14■□□□□ 0.65
SHKBP1-207ENST00000595631 USP31Q70CQ4 1352 aa19.14■□□□□ 0.65
SHKBP1-207ENST00000595631 ZBTB7CA1YPR0 619 aa19.13■□□□□ 0.65
SHKBP1-207ENST00000595631 CARD14Q9BXL6 1004 aa19.13■□□□□ 0.65
SHKBP1-207ENST00000595631 OVOS2A0A0J9YW53 1432 aa19.13■□□□□ 0.65
SHKBP1-207ENST00000595631 OVOS2Q6IE36 1432 aa19.13■□□□□ 0.65
SHKBP1-207ENST00000595631 NSD3Q9BZ95 1437 aa19.13■□□□□ 0.65
SHKBP1-207ENST00000595631 GLI3P10071 1580 aa19.13■□□□□ 0.65
SHKBP1-207ENST00000595631 ANKRD26Q9UPS8 1709 aa19.12■□□□□ 0.65
SHKBP1-207ENST00000595631 CPDO75976 1380 aa19.12■□□□□ 0.65
SHKBP1-207ENST00000595631 UNC5CLQ8IV45 518 aa19.12■□□□□ 0.65
SHKBP1-207ENST00000595631 BTG4Q9NY30 223 aa19.12■□□□□ 0.65
SHKBP1-207ENST00000595631 CAMTA1Q9Y6Y1 1673 aa19.11■□□□□ 0.65
SHKBP1-207ENST00000595631 TRPC5Q9UL62 973 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-207ENST00000595631 RXRBP28702 533 aa19.09■□□□□ 0.65
SHKBP1-207ENST00000595631 BRWD3Q6RI45 1802 aa19.08■□□□□ 0.64
SHKBP1-207ENST00000595631 CCDC7Q96M83 1385 aa19.07■□□□□ 0.64
SHKBP1-207ENST00000595631 FYB1O15117 783 aa19.07■□□□□ 0.64
SHKBP1-207ENST00000595631 RBM6P78332 1123 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-207ENST00000595631 GGNBP2Q9H3C7 697 aa19.07■□□□□ 0.64
SHKBP1-207ENST00000595631 PANK3Q9H999 370 aa19.07■□□□□ 0.64
SHKBP1-207ENST00000595631 RGS12O14924 1447 aa19.07■□□□□ 0.64
SHKBP1-207ENST00000595631 WASHC2AQ641Q2 1341 aa19.06■□□□□ 0.64
SHKBP1-207ENST00000595631 KCNH5Q8NCM2 988 aa19.06■□□□□ 0.64
SHKBP1-207ENST00000595631 FBLN1P23142 703 aa19.05■□□□□ 0.64
SHKBP1-207ENST00000595631 ARHGEF25Q86VW2 580 aa19.05■□□□□ 0.64
SHKBP1-207ENST00000595631 COG3Q96JB2 828 aa19.05■□□□□ 0.64
SHKBP1-207ENST00000595631 STRN4Q9NRL3 753 aa19.05■□□□□ 0.64
SHKBP1-207ENST00000595631 CCDC9Q9Y3X0 531 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-207ENST00000595631 COL5A2P05997 1499 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-207ENST00000595631 VPS72Q15906 364 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms