RNA–Protein interactions for RNA: ENST00000595369.1

SH2D3A-203, Transcript of SH2 domain containing 3A, humanhuman

TSL 2

Gene SH2D3A, Length 3,493 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-203ENST00000595369 IFT172Q9UG01 1749 aa11.33□□□□□ -0.6
SH2D3A-203ENST00000595369 GRPEL1Q9HAV7 217 aa11.33□□□□□ -0.6
SH2D3A-203ENST00000595369 CABP1Q9NZU7 370 aa11.33□□□□□ -0.6
SH2D3A-203ENST00000595369 POLR3AO14802 1390 aaPredicted RBP11.33□□□□□ -0.6
SH2D3A-203ENST00000595369 NPC1L1Q9UHC9 1359 aa11.33□□□□□ -0.6
SH2D3A-203ENST00000595369 CLTCL1P53675 1640 aa11.33□□□□□ -0.6
SH2D3A-203ENST00000595369 PRKAR2BP31323 418 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 ERBB4Q15303 1308 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 MADDQ8WXG6 1647 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 MROH2AA6NES4 1674 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 LAMC1P11047 1609 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 WAPLQ7Z5K2 1190 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 MPNDQ8N594 471 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 PRAM1Q96QH2 718 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 SYNMO15061 1565 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 FYB1O15117 783 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 CLCN1P35523 988 aa11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 OTUD7AQ8TE49 926 aaPredicted RBP11.32□□□□□ -0.6
SH2D3A-203ENST00000595369 SSFA2P28290 1259 aa11.31□□□□□ -0.6
SH2D3A-203ENST00000595369 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
SH2D3A-203ENST00000595369 NGEFQ8N5V2 710 aa11.31□□□□□ -0.6
SH2D3A-203ENST00000595369 C14orf93Q9H972 538 aaKnown RBP11.31□□□□□ -0.6
SH2D3A-203ENST00000595369 MRE11P49959 708 aa11.31□□□□□ -0.6
SH2D3A-203ENST00000595369 HSP90AA2PQ14568 343 aaPredicted RBP11.31□□□□□ -0.6
SH2D3A-203ENST00000595369 NINLQ9Y2I6 1382 aa11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 UNC13BO14795 1591 aa11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 SMARCA5O60264 1052 aaPredicted RBP11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 PKP1Q13835 747 aa11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 FBXO31Q5XUX0 539 aaPredicted RBP11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 IQGAP3Q86VI3 1631 aa11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 INO80Q9ULG1 1556 aaPredicted RBP11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 ZC3H13Q5T200 1668 aaKnown RBP11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 ZBTB40Q9NUA8 1239 aa11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 ASXL2Q76L83 1435 aa11.3□□□□□ -0.6
SH2D3A-203ENST00000595369 ESPNB1AK53 854 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 IDI1Q13907 227 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 RRS1Q15050 365 aaKnown RBP11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 TSHZ3Q63HK5 1081 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 PLEKHF1Q96S99 279 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 MIS18AQ9NYP9 233 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 DDX19BQ9UMR2 479 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 TRIM44Q96DX7 344 aaPredicted RBP11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 ABCA6Q8N139 1617 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 FRMPD1Q5SYB0 1578 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 MLECQ14165 292 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 GAS2L2Q8NHY3 880 aa11.29□□□□□ -0.6
SH2D3A-203ENST00000595369 EVC2Q86UK5 1308 aa11.28□□□□□ -0.6
SH2D3A-203ENST00000595369 CD109Q6YHK3 1445 aa11.28□□□□□ -0.6
SH2D3A-203ENST00000595369 PLEKHG5O94827 1062 aa11.28□□□□□ -0.6
SH2D3A-203ENST00000595369 DIAPH1O60610 1272 aaKnown RBP11.28□□□□□ -0.6
SH2D3A-203ENST00000595369 ZNF692Q9BU19 519 aaPredicted RBP11.28□□□□□ -0.6
SH2D3A-203ENST00000595369 TBC1D9Q6ZT07 1266 aa11.28□□□□□ -0.6
SH2D3A-203ENST00000595369 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
SH2D3A-203ENST00000595369 ZNF428Q96B54 188 aa11.27□□□□□ -0.61
SH2D3A-203ENST00000595369 A0A1W2PP64 1363 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 ARHGEF40Q8TER5 1519 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 DDX11L8A8MPP1 907 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 C8orf58Q8NAV2 365 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 STAG3Q9UJ98 1225 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 MYOM1P52179 1685 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 IQGAP1P46940 1657 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 KIF2CQ99661 725 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 AAMPQ13685 434 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 SMC5Q8IY18 1101 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 NECTIN2Q92692 538 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 FANCAO15360 1455 aa11.26□□□□□ -0.61
SH2D3A-203ENST00000595369 RTEL1-TNFRSF6BF6WH68 1400 aa11.25□□□□□ -0.61
SH2D3A-203ENST00000595369 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
SH2D3A-203ENST00000595369 NUCB1Q02818 461 aa11.25□□□□□ -0.61
SH2D3A-203ENST00000595369 CDK19Q9BWU1 502 aa11.25□□□□□ -0.61
SH2D3A-203ENST00000595369 GLIPR1L2Q4G1C9 344 aa11.25□□□□□ -0.61
SH2D3A-203ENST00000595369 MCTP1Q6DN14 999 aa11.25□□□□□ -0.61
SH2D3A-203ENST00000595369 VIRMAQ69YN4 1812 aaKnown RBP11.25□□□□□ -0.61
SH2D3A-203ENST00000595369 NME9Q86XW9 330 aa11.24□□□□□ -0.61
SH2D3A-203ENST00000595369 STAC3Q96MF2 364 aa11.24□□□□□ -0.61
SH2D3A-203ENST00000595369 RBM27Q9P2N5 1060 aaKnown RBP11.24□□□□□ -0.61
SH2D3A-203ENST00000595369 HDAC1Q13547 482 aaPredicted RBP11.24□□□□□ -0.61
SH2D3A-203ENST00000595369 PKNOX2Q96KN3 472 aa11.24□□□□□ -0.61
SH2D3A-203ENST00000595369 ADGRL1O94910 1474 aa11.23□□□□□ -0.61
SH2D3A-203ENST00000595369 ZBTB7BO15156 539 aaPredicted RBP11.23□□□□□ -0.61
SH2D3A-203ENST00000595369 RBM10P98175 930 aaKnown RBP11.23□□□□□ -0.61
SH2D3A-203ENST00000595369 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
SH2D3A-203ENST00000595369 DDX49Q9Y6V7 483 aaKnown RBP11.23□□□□□ -0.61
SH2D3A-203ENST00000595369 ZNF518AQ6AHZ1 1483 aa11.23□□□□□ -0.61
SH2D3A-203ENST00000595369 TRPM2O94759 1503 aa11.23□□□□□ -0.61
SH2D3A-203ENST00000595369 MBIPQ9NS73 344 aa11.23□□□□□ -0.61
SH2D3A-203ENST00000595369 CCDC27Q2M243 656 aa11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 AEBP1Q8IUX7 1158 aa11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 VAMP4O75379 141 aa11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 CAVIN1Q6NZI2 390 aaKnown RBP11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 SLC4A10Q6U841 1118 aa11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 IPO8O15397 1037 aaKnown RBP11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 GSPT1P15170 499 aaKnown RBP11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 MCM10Q7L590 875 aa11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 LARP6Q9BRS8 491 aaKnown RBP11.22□□□□□ -0.61
SH2D3A-203ENST00000595369 POLKQ9UBT6 870 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms