RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SLKQ9H2G2 1235 aaPredicted RBP20.99■□□□□ 0.95
LIG1-206ENST00000594067 ARHGAP31Q2M1Z3 1444 aa20.98■□□□□ 0.95
LIG1-206ENST00000594067 SSH1Q8WYL5 1049 aa20.98■□□□□ 0.95
LIG1-206ENST00000594067 UPF2Q9HAU5 1272 aaKnown RBP20.98■□□□□ 0.95
LIG1-206ENST00000594067 CT47B1P0C2W7 299 aaPredicted RBP20.98■□□□□ 0.95
LIG1-206ENST00000594067 TRIM27P14373 513 aa20.98■□□□□ 0.95
LIG1-206ENST00000594067 TERF2IPQ9NYB0 399 aa20.98■□□□□ 0.95
LIG1-206ENST00000594067 NEO1Q92859 1461 aa20.97■□□□□ 0.95
LIG1-206ENST00000594067 COL3A1P02461 1466 aaPredicted RBP20.97■□□□□ 0.95
LIG1-206ENST00000594067 ZFYVE9O95405 1425 aa20.96■□□□□ 0.95
LIG1-206ENST00000594067 TBC1D32Q96NH3 1257 aa20.96■□□□□ 0.95
LIG1-206ENST00000594067 ATAD2Q6PL18 1390 aa20.96■□□□□ 0.95
LIG1-206ENST00000594067 RIPK4P57078 832 aa20.96■□□□□ 0.95
LIG1-206ENST00000594067 ITPRIPQ8IWB1 547 aa20.96■□□□□ 0.95
LIG1-206ENST00000594067 YEATS2Q9ULM3 1422 aa20.95■□□□□ 0.94
LIG1-206ENST00000594067 PTPRMP28827 1452 aa20.95■□□□□ 0.94
LIG1-206ENST00000594067 ZMYM3Q14202 1370 aa20.94■□□□□ 0.94
LIG1-206ENST00000594067 NOB1Q9ULX3 412 aaKnown RBP20.94■□□□□ 0.94
LIG1-206ENST00000594067 CD163L1Q9NR16 1453 aa20.93■□□□□ 0.94
LIG1-206ENST00000594067 DIAPH1O60610 1272 aaKnown RBP20.93■□□□□ 0.94
LIG1-206ENST00000594067 ATF7IPQ6VMQ6 1270 aa20.93■□□□□ 0.94
LIG1-206ENST00000594067 YTHDC2Q9H6S0 1430 aaKnown RBP20.93■□□□□ 0.94
LIG1-206ENST00000594067 ANTXR1Q9H6X2 564 aa20.92■□□□□ 0.94
LIG1-206ENST00000594067 FBXO31Q5XUX0 539 aaPredicted RBP20.92■□□□□ 0.94
LIG1-206ENST00000594067 FAM43AQ8N2R8 423 aa20.92■□□□□ 0.94
LIG1-206ENST00000594067 CDK19Q9BWU1 502 aa20.92■□□□□ 0.94
LIG1-206ENST00000594067 HDGFL2Q7Z4V5 671 aaPredicted RBP20.91■□□□□ 0.94
LIG1-206ENST00000594067 DDX19BQ9UMR2 479 aa20.91■□□□□ 0.94
LIG1-206ENST00000594067 CABP1Q9NZU7 370 aa20.91■□□□□ 0.94
LIG1-206ENST00000594067 MYO5BQ9ULV0 1848 aa20.91■□□□□ 0.94
LIG1-206ENST00000594067 TBC1D2Q9BYX2 928 aa20.91■□□□□ 0.94
LIG1-206ENST00000594067 IL16Q14005 1332 aa20.9■□□□□ 0.94
LIG1-206ENST00000594067 TMEM57Q8N5G2 664 aa20.9■□□□□ 0.94
LIG1-206ENST00000594067 FBLN1P23142 703 aa20.89■□□□□ 0.93
LIG1-206ENST00000594067 HDAC1Q13547 482 aaPredicted RBP20.89■□□□□ 0.93
LIG1-206ENST00000594067 TMEM131LA2VDJ0 1609 aa20.88■□□□□ 0.93
LIG1-206ENST00000594067 MED14O60244 1454 aa20.87■□□□□ 0.93
LIG1-206ENST00000594067 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.87■□□□□ 0.93
LIG1-206ENST00000594067 MFAP1P55081 439 aaKnown RBP20.87■□□□□ 0.93
LIG1-206ENST00000594067 SPRYD3Q8NCJ5 442 aa20.86■□□□□ 0.93
LIG1-206ENST00000594067 STAG3Q9UJ98 1225 aa20.86■□□□□ 0.93
LIG1-206ENST00000594067 PNPLA6Q8IY17 1366 aa20.86■□□□□ 0.93
LIG1-206ENST00000594067 PREX1Q8TCU6 1659 aa20.85■□□□□ 0.93
LIG1-206ENST00000594067 PNNQ9H307 717 aaKnown RBP20.85■□□□□ 0.93
LIG1-206ENST00000594067 RICTORQ6R327 1708 aa20.85■□□□□ 0.93
LIG1-206ENST00000594067 PRKAR2BP31323 418 aa20.84■□□□□ 0.93
LIG1-206ENST00000594067 ZBTB40Q9NUA8 1239 aa20.84■□□□□ 0.93
LIG1-206ENST00000594067 C22orf23Q9BZE7 217 aa20.84■□□□□ 0.93
LIG1-206ENST00000594067 KIF16BQ96L93 1317 aa20.84■□□□□ 0.93
LIG1-206ENST00000594067 ANKRD26Q9UPS8 1709 aa20.83■□□□□ 0.93
LIG1-206ENST00000594067 SMC5Q8IY18 1101 aa20.83■□□□□ 0.93
LIG1-206ENST00000594067 IPO8O15397 1037 aaKnown RBP20.83■□□□□ 0.92
LIG1-206ENST00000594067 FCHSD2O94868 740 aa20.83■□□□□ 0.92
LIG1-206ENST00000594067 WAPLQ7Z5K2 1190 aa20.83■□□□□ 0.92
LIG1-206ENST00000594067 ARHGEF40Q8TER5 1519 aa20.83■□□□□ 0.92
LIG1-206ENST00000594067 CLTCQ00610 1675 aaKnown RBP20.83■□□□□ 0.92
LIG1-206ENST00000594067 ALKQ9UM73 1620 aa20.82■□□□□ 0.92
LIG1-206ENST00000594067 RSPH6AQ9H0K4 717 aa20.81■□□□□ 0.92
LIG1-206ENST00000594067 POLKQ9UBT6 870 aa20.81■□□□□ 0.92
LIG1-206ENST00000594067 HMOX1P09601 288 aa20.81■□□□□ 0.92
LIG1-206ENST00000594067 ALDH1L2Q3SY69 923 aa20.8■□□□□ 0.92
LIG1-206ENST00000594067 LRRC7Q96NW7 1537 aa20.8■□□□□ 0.92
LIG1-206ENST00000594067 EIF5BO60841 1220 aaKnown RBP20.79■□□□□ 0.92
LIG1-206ENST00000594067 L1TD1Q5T7N2 865 aaKnown RBP20.79■□□□□ 0.92
LIG1-206ENST00000594067 THUMPD2Q9BTF0 503 aaKnown RBP20.79■□□□□ 0.92
LIG1-206ENST00000594067 PHACTR3Q96KR7 559 aa20.79■□□□□ 0.92
LIG1-206ENST00000594067 LNPKQ9C0E8 428 aa20.78■□□□□ 0.92
LIG1-206ENST00000594067 FAM135BQ49AJ0 1406 aa20.77■□□□□ 0.92
LIG1-206ENST00000594067 NUCB1Q02818 461 aa20.76■□□□□ 0.91
LIG1-206ENST00000594067 EMILIN1Q9Y6C2 1016 aa20.76■□□□□ 0.91
LIG1-206ENST00000594067 KIF20BQ96Q89 1820 aa20.76■□□□□ 0.91
LIG1-206ENST00000594067 NFE2L2Q16236 605 aa20.75■□□□□ 0.91
LIG1-206ENST00000594067 RRAGDQ9NQL2 400 aaPredicted RBP20.75■□□□□ 0.91
LIG1-206ENST00000594067 ELL2O00472 640 aaPredicted RBP20.74■□□□□ 0.91
LIG1-206ENST00000594067 TSPYL6Q8N831 410 aa20.74■□□□□ 0.91
LIG1-206ENST00000594067 CDC42BPGQ6DT37 1551 aa20.73■□□□□ 0.91
LIG1-206ENST00000594067 VAMP4O75379 141 aa20.73■□□□□ 0.91
LIG1-206ENST00000594067 MCM4P33991 863 aa20.73■□□□□ 0.91
LIG1-206ENST00000594067 CHD1LQ86WJ1 897 aa20.73■□□□□ 0.91
LIG1-206ENST00000594067 C1orf115Q9H7X2 142 aa20.73■□□□□ 0.91
LIG1-206ENST00000594067 ZRANB1Q9UGI0 708 aa20.73■□□□□ 0.91
LIG1-206ENST00000594067 NME9Q86XW9 330 aa20.72■□□□□ 0.91
LIG1-206ENST00000594067 MRPL50Q8N5N7 158 aaKnown RBP20.72■□□□□ 0.91
LIG1-206ENST00000594067 XRCC6P12956 609 aaKnown RBP eCLIP20.71■□□□□ 0.91
LIG1-206ENST00000594067 FSD2A1L4K1 749 aa20.71■□□□□ 0.91
LIG1-206ENST00000594067 ZBTB7BO15156 539 aaPredicted RBP20.71■□□□□ 0.91
LIG1-206ENST00000594067 ZNF428Q96B54 188 aa20.71■□□□□ 0.91
LIG1-206ENST00000594067 ATP7BP35670 1465 aa20.7■□□□□ 0.9
LIG1-206ENST00000594067 IL13P35225 146 aa20.7■□□□□ 0.9
LIG1-206ENST00000594067 BRPF1P55201 1214 aaPredicted RBP20.7■□□□□ 0.9
LIG1-206ENST00000594067 ANKRD45Q5TZF3 282 aa20.69■□□□□ 0.9
LIG1-206ENST00000594067 HSCBQ8IWL3 235 aa20.69■□□□□ 0.9
LIG1-206ENST00000594067 CHMP5Q9NZZ3 219 aa20.69■□□□□ 0.9
LIG1-206ENST00000594067 PPIP5K1Q6PFW1 1433 aa20.69■□□□□ 0.9
LIG1-206ENST00000594067 GNAI1P63096 354 aa20.69■□□□□ 0.9
LIG1-206ENST00000594067 MBIPQ9NS73 344 aa20.69■□□□□ 0.9
LIG1-206ENST00000594067 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
LIG1-206ENST00000594067 A2ML1A8K2U0 1454 aa20.68■□□□□ 0.9
LIG1-206ENST00000594067 GOLGA6L3A6NEY3 463 aa20.68■□□□□ 0.9
LIG1-206ENST00000594067 CALD1Q05682 793 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms