RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 TSPY10P0CW01 314 aa5.13□□□□□ -1.59
VRK3-204ENST00000593912 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.13□□□□□ -1.59
VRK3-204ENST00000593912 SLC52A1Q9NWF4 448 aa5.13□□□□□ -1.59
VRK3-204ENST00000593912 LMTK2Q8IWU2 1503 aa5.13□□□□□ -1.59
VRK3-204ENST00000593912 DUOX2Q9NRD8 1548 aa5.13□□□□□ -1.59
VRK3-204ENST00000593912 SBF2Q86WG5 1849 aa5.12□□□□□ -1.59
VRK3-204ENST00000593912 NUTM2FA1L443 756 aa5.12□□□□□ -1.59
VRK3-204ENST00000593912 HDGFP51858 240 aaKnown RBP5.12□□□□□ -1.59
VRK3-204ENST00000593912 PTF1AQ7RTS3 328 aa5.12□□□□□ -1.59
VRK3-204ENST00000593912 COL14A1Q05707 1796 aaKnown RBP5.11□□□□□ -1.59
VRK3-204ENST00000593912 MLLT1Q03111 559 aaPredicted RBP5.11□□□□□ -1.59
VRK3-204ENST00000593912 PROM2Q8N271 834 aa5.11□□□□□ -1.59
VRK3-204ENST00000593912 TECPR2O15040 1411 aa5.11□□□□□ -1.59
VRK3-204ENST00000593912 ARHGEF28Q8N1W1 1705 aaKnown RBP5.11□□□□□ -1.59
VRK3-204ENST00000593912 GRIN3BO60391 1043 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 TOMM70O94826 608 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 UBTFP17480 764 aaKnown RBP5.1□□□□□ -1.59
VRK3-204ENST00000593912 PDE3BQ13370 1112 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 KANK1Q14678 1352 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 SLC15A2Q16348 729 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 TNS3Q68CZ2 1445 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 LMOD2Q6P5Q4 547 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 TOPAZ1Q8N9V7 1692 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 ROBO2Q9HCK4 1378 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 STK32BQ9NY57 414 aa5.1□□□□□ -1.59
VRK3-204ENST00000593912 USP19O94966 1318 aa5.09□□□□□ -1.59
VRK3-204ENST00000593912 SPATA31A1Q5TZJ5 1347 aa5.09□□□□□ -1.59
VRK3-204ENST00000593912 ADRA2BP18089 450 aa5.09□□□□□ -1.59
VRK3-204ENST00000593912 RSPH4AQ5TD94 716 aa5.09□□□□□ -1.59
VRK3-204ENST00000593912 KRT28Q7Z3Y7 464 aa5.09□□□□□ -1.59
VRK3-204ENST00000593912 USP35Q9P2H5 1018 aa5.09□□□□□ -1.59
VRK3-204ENST00000593912 PEAK1Q9H792 1746 aa5.09□□□□□ -1.6
VRK3-204ENST00000593912 CDC42BPGQ6DT37 1551 aa5.08□□□□□ -1.6
VRK3-204ENST00000593912 RRBP1Q9P2E9 1410 aaKnown RBP5.08□□□□□ -1.6
VRK3-204ENST00000593912 KIF15Q9NS87 1388 aa5.08□□□□□ -1.6
VRK3-204ENST00000593912 PLSCR1O15162 318 aa5.08□□□□□ -1.6
VRK3-204ENST00000593912 ABHD8Q96I13 439 aa5.08□□□□□ -1.6
VRK3-204ENST00000593912 NMRK2Q9NPI5 230 aa5.08□□□□□ -1.6
VRK3-204ENST00000593912 RGPD8O14715 1765 aaPredicted RBP5.08□□□□□ -1.6
VRK3-204ENST00000593912 CCDC144AA2RUR9 1427 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 ERBINQ96RT1 1412 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 LRPPRCP42704 1394 aaKnown RBP5.07□□□□□ -1.6
VRK3-204ENST00000593912 DHX57Q6P158 1386 aaKnown RBP5.07□□□□□ -1.6
VRK3-204ENST00000593912 COL24A1Q17RW2 1714 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 FOXN1O15353 648 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 STRN4Q9NRL3 753 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 RRP7BPQ9NSQ0 103 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 KIF1AQ12756 1690 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 PDE4DIPQ5VU43 2346 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 TULP4Q9NRJ4 1543 aa5.07□□□□□ -1.6
VRK3-204ENST00000593912 CEP162Q5TB80 1403 aa5.06□□□□□ -1.6
VRK3-204ENST00000593912 PAPPAQ13219 1627 aa5.06□□□□□ -1.6
VRK3-204ENST00000593912 TXNRD1Q16881 649 aa5.06□□□□□ -1.6
VRK3-204ENST00000593912 PARP4Q9UKK3 1724 aaKnown RBP5.06□□□□□ -1.6
VRK3-204ENST00000593912 CRYBG1Q9Y4K1 1723 aa5.06□□□□□ -1.6
VRK3-204ENST00000593912 IQGAP3Q86VI3 1631 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 TUBGCP6Q96RT7 1819 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 CCDC85CA6NKD9 419 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 RGS19P49795 217 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 C1QBPQ07021 282 aaKnown RBP5.05□□□□□ -1.6
VRK3-204ENST00000593912 CHRNA2Q15822 529 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 ZNF827Q17R98 1081 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 PLSCR2Q9NRY7 297 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 FMN2Q9NZ56 1722 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 OVOS2A0A0G2JMS6 1433 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 OVOS2A0A0J9YW53 1432 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 NAIPQ13075 1403 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 OVOS2Q6IE36 1432 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 PRAG1Q86YV5 1406 aa5.05□□□□□ -1.6
VRK3-204ENST00000593912 PHRF1Q9P1Y6 1649 aaKnown RBP5.05□□□□□ -1.6
VRK3-204ENST00000593912 RBM46Q8TBY0 533 aaKnown RBP5.04□□□□□ -1.6
VRK3-204ENST00000593912 EEA1Q15075 1411 aa5.04□□□□□ -1.6
VRK3-204ENST00000593912 E9PCH4 1651 aa5.03□□□□□ -1.6
VRK3-204ENST00000593912 POLD1P28340 1107 aa5.03□□□□□ -1.6
VRK3-204ENST00000593912 PMFBP1Q8TBY8 1022 aa5.03□□□□□ -1.6
VRK3-204ENST00000593912 PRDM11Q9NQV5 511 aa5.03□□□□□ -1.6
VRK3-204ENST00000593912 PRDM10Q9NQV6 1147 aa5.03□□□□□ -1.6
VRK3-204ENST00000593912 LRRC37A3O60309 1634 aa5.03□□□□□ -1.6
VRK3-204ENST00000593912 TRPM3Q9HCF6 1732 aaPredicted RBP5.03□□□□□ -1.6
VRK3-204ENST00000593912 ARHGEF10O15013 1369 aa5.03□□□□□ -1.6
VRK3-204ENST00000593912 ALS2Q96Q42 1657 aa5.02□□□□□ -1.61
VRK3-204ENST00000593912 ATP7BP35670 1465 aa5.02□□□□□ -1.61
VRK3-204ENST00000593912 BARGINQ6ZT62 677 aa5.02□□□□□ -1.61
VRK3-204ENST00000593912 C16orf71Q8IYS4 520 aaPredicted RBP5.02□□□□□ -1.61
VRK3-204ENST00000593912 HFM1A2PYH4 1435 aa5.02□□□□□ -1.61
VRK3-204ENST00000593912 SBNO1A3KN83 1393 aa5.02□□□□□ -1.61
VRK3-204ENST00000593912 AKAP12Q02952 1782 aa5.01□□□□□ -1.61
VRK3-204ENST00000593912 QSER1Q2KHR3 1735 aa5.01□□□□□ -1.61
VRK3-204ENST00000593912 SSH2Q76I76 1423 aa5.01□□□□□ -1.61
VRK3-204ENST00000593912 LBX1P52954 281 aa5.01□□□□□ -1.61
VRK3-204ENST00000593912 PSME1Q06323 249 aa5.01□□□□□ -1.61
VRK3-204ENST00000593912 FSTL1Q12841 308 aa5.01□□□□□ -1.61
VRK3-204ENST00000593912 LARP1Q6PKG0 1096 aaKnown RBP5.01□□□□□ -1.61
VRK3-204ENST00000593912 CFAP44Q96MT7 982 aa5.01□□□□□ -1.61
VRK3-204ENST00000593912 KIAA0232Q92628 1395 aa5.01□□□□□ -1.61
VRK3-204ENST00000593912 IFT172Q9UG01 1749 aa5□□□□□ -1.61
VRK3-204ENST00000593912 ZNF326Q5BKZ1 582 aaKnown RBP5□□□□□ -1.61
VRK3-204ENST00000593912 TCP11L2Q8N4U5 519 aa5□□□□□ -1.61
VRK3-204ENST00000593912 PHF8Q9UPP1 1060 aa5□□□□□ -1.61
VRK3-204ENST00000593912 NRXN1Q9ULB1 1477 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms