RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
SOD3-202ENST00000593742 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
SOD3-202ENST00000593742 BCL9LQ86UU0 1499 aa17.18■□□□□ 0.34
SOD3-202ENST00000593742 TRPM1Q7Z4N2 1603 aa17.18■□□□□ 0.34
SOD3-202ENST00000593742 CABP2Q9NPB3 220 aa17.17■□□□□ 0.34
SOD3-202ENST00000593742 UPF1Q92900 1129 aaKnown RBP eCLIP17.16■□□□□ 0.34
SOD3-202ENST00000593742 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
SOD3-202ENST00000593742 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
SOD3-202ENST00000593742 UNC5CLQ8IV45 518 aa17.15■□□□□ 0.34
SOD3-202ENST00000593742 CCDC61Q9Y6R9 512 aa17.15■□□□□ 0.34
SOD3-202ENST00000593742 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
SOD3-202ENST00000593742 TOPAZ1Q8N9V7 1692 aa17.14■□□□□ 0.33
SOD3-202ENST00000593742 CCDC9Q9Y3X0 531 aaKnown RBP17.14■□□□□ 0.33
SOD3-202ENST00000593742 SLIT2O94813 1529 aa17.14■□□□□ 0.33
SOD3-202ENST00000593742 ACEP12821 1306 aa17.14■□□□□ 0.33
SOD3-202ENST00000593742 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
SOD3-202ENST00000593742 NBPF8Q3BBV2 869 aa17.13■□□□□ 0.33
SOD3-202ENST00000593742 GJD4Q96KN9 370 aaPredicted RBP17.13■□□□□ 0.33
SOD3-202ENST00000593742 PPIP5K1Q6PFW1 1433 aa17.13■□□□□ 0.33
SOD3-202ENST00000593742 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.12■□□□□ 0.33
SOD3-202ENST00000593742 FAM83GA6ND36 823 aa17.11■□□□□ 0.33
SOD3-202ENST00000593742 RALGAPBQ86X10 1494 aa17.11■□□□□ 0.33
SOD3-202ENST00000593742 PLEKHG3A1L390 1219 aa17.09■□□□□ 0.33
SOD3-202ENST00000593742 CARD11Q9BXL7 1154 aa17.09■□□□□ 0.33
SOD3-202ENST00000593742 BTG4Q9NY30 223 aa17.09■□□□□ 0.33
SOD3-202ENST00000593742 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
SOD3-202ENST00000593742 NWD2Q9ULI1 1742 aa17.08■□□□□ 0.32
SOD3-202ENST00000593742 GLI3P10071 1580 aa17.08■□□□□ 0.32
SOD3-202ENST00000593742 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
SOD3-202ENST00000593742 EVC2Q86UK5 1308 aa17.08■□□□□ 0.32
SOD3-202ENST00000593742 PRDM11Q9NQV5 511 aa17.08■□□□□ 0.32
SOD3-202ENST00000593742 A0A0G2JS52 829 aa17.07■□□□□ 0.32
SOD3-202ENST00000593742 MYT1Q01538 1121 aa17.07■□□□□ 0.32
SOD3-202ENST00000593742 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
SOD3-202ENST00000593742 CABP1Q9NZU7 370 aa17.07■□□□□ 0.32
SOD3-202ENST00000593742 CRYBG1Q9Y4K1 1723 aa17.07■□□□□ 0.32
SOD3-202ENST00000593742 ZC3H6P61129 1189 aaKnown RBP17.06■□□□□ 0.32
SOD3-202ENST00000593742 VPS72Q15906 364 aa17.06■□□□□ 0.32
SOD3-202ENST00000593742 COL14A1Q05707 1796 aaKnown RBP17.05■□□□□ 0.32
SOD3-202ENST00000593742 CHRNA2Q15822 529 aa17.05■□□□□ 0.32
SOD3-202ENST00000593742 PHRF1Q9P1Y6 1649 aaKnown RBP17.05■□□□□ 0.32
SOD3-202ENST00000593742 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
SOD3-202ENST00000593742 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
SOD3-202ENST00000593742 SEPT12Q8IYM1 358 aa17.03■□□□□ 0.32
SOD3-202ENST00000593742 ZBTB7CA1YPR0 619 aa17.02■□□□□ 0.32
SOD3-202ENST00000593742 STRN4Q9NRL3 753 aa17.02■□□□□ 0.32
SOD3-202ENST00000593742 FAM98CQ17RN3 349 aaKnown RBP17.01■□□□□ 0.31
SOD3-202ENST00000593742 PCGF6Q9BYE7 350 aa17.01■□□□□ 0.31
SOD3-202ENST00000593742 EP400Q96L91 3159 aa17.01■□□□□ 0.31
SOD3-202ENST00000593742 BRWD3Q6RI45 1802 aa17■□□□□ 0.31
SOD3-202ENST00000593742 USP6P35125 1406 aa17■□□□□ 0.31
SOD3-202ENST00000593742 NRKQ7Z2Y5 1582 aa17■□□□□ 0.31
SOD3-202ENST00000593742 NLRP13Q86W25 1043 aa16.99■□□□□ 0.31
SOD3-202ENST00000593742 NLRP6P59044 892 aa16.98■□□□□ 0.31
SOD3-202ENST00000593742 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
SOD3-202ENST00000593742 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
SOD3-202ENST00000593742 USP19O94966 1318 aa16.96■□□□□ 0.31
SOD3-202ENST00000593742 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.31
SOD3-202ENST00000593742 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.31
SOD3-202ENST00000593742 SOX12O15370 315 aa16.96■□□□□ 0.31
SOD3-202ENST00000593742 EVA1CP58658 441 aa16.96■□□□□ 0.31
SOD3-202ENST00000593742 GCP02774 474 aa16.95■□□□□ 0.3
SOD3-202ENST00000593742 KRT27Q7Z3Y8 459 aa16.95■□□□□ 0.3
SOD3-202ENST00000593742 BRD4O60885 1362 aaPredicted RBP16.94■□□□□ 0.3
SOD3-202ENST00000593742 KTN1Q86UP2 1357 aaKnown RBP16.94■□□□□ 0.3
SOD3-202ENST00000593742 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
SOD3-202ENST00000593742 PIK3C2AO00443 1686 aa16.94■□□□□ 0.3
SOD3-202ENST00000593742 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
SOD3-202ENST00000593742 SBNO2Q9Y2G9 1366 aa16.93■□□□□ 0.3
SOD3-202ENST00000593742 ONECUT3O60422 494 aaPredicted RBP16.93■□□□□ 0.3
SOD3-202ENST00000593742 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
SOD3-202ENST00000593742 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.92■□□□□ 0.3
SOD3-202ENST00000593742 SSH2Q76I76 1423 aa16.92■□□□□ 0.3
SOD3-202ENST00000593742 SPATA31A1Q5TZJ5 1347 aa16.92■□□□□ 0.3
SOD3-202ENST00000593742 CAMTA1Q9Y6Y1 1673 aa16.91■□□□□ 0.3
SOD3-202ENST00000593742 CPDO75976 1380 aa16.91■□□□□ 0.3
SOD3-202ENST00000593742 ST20-MTHFSA0A0A6YYL1 179 aa16.91■□□□□ 0.3
SOD3-202ENST00000593742 FAM182BQ5T319 152 aa16.91■□□□□ 0.3
SOD3-202ENST00000593742 LARP1Q6PKG0 1096 aaKnown RBP16.91■□□□□ 0.3
SOD3-202ENST00000593742 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
SOD3-202ENST00000593742 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.29
SOD3-202ENST00000593742 CPSF1Q10570 1443 aaKnown RBP16.89■□□□□ 0.29
SOD3-202ENST00000593742 LMO7Q8WWI1 1683 aa16.89■□□□□ 0.29
SOD3-202ENST00000593742 CCDC125Q86Z20 511 aa16.89■□□□□ 0.29
SOD3-202ENST00000593742 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
SOD3-202ENST00000593742 SLIT3O75094 1523 aa16.89■□□□□ 0.29
SOD3-202ENST00000593742 MON2Q7Z3U7 1717 aa16.88■□□□□ 0.29
SOD3-202ENST00000593742 HDGFL2Q7Z4V5 671 aaPredicted RBP16.88■□□□□ 0.29
SOD3-202ENST00000593742 DEFB132Q7Z7B7 95 aa16.88■□□□□ 0.29
SOD3-202ENST00000593742 TTC21AQ8NDW8 1320 aa16.88■□□□□ 0.29
SOD3-202ENST00000593742 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
SOD3-202ENST00000593742 ZRANB1Q9UGI0 708 aa16.87■□□□□ 0.29
SOD3-202ENST00000593742 USP47Q96K76 1375 aa16.87■□□□□ 0.29
SOD3-202ENST00000593742 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
SOD3-202ENST00000593742 SLC4A2P04920 1241 aa16.86■□□□□ 0.29
SOD3-202ENST00000593742 NME9Q86XW9 330 aa16.86■□□□□ 0.29
SOD3-202ENST00000593742 TESK2Q96S53 571 aa16.86■□□□□ 0.29
SOD3-202ENST00000593742 CD163L1Q9NR16 1453 aa16.86■□□□□ 0.29
SOD3-202ENST00000593742 TCP11L2Q8N4U5 519 aa16.85■□□□□ 0.29
SOD3-202ENST00000593742 KCNH5Q8NCM2 988 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms