RNA–Protein interactions for RNA: ENST00000593708.1

USF2-204, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 3

Gene USF2, Length 474 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-204ENST00000593708 KIAA1210Q9ULL0 1709 aa31.53■■■□□ 2.64
USF2-204ENST00000593708 ZRANB1Q9UGI0 708 aa31.53■■■□□ 2.64
USF2-204ENST00000593708 TOPAZ1Q8N9V7 1692 aa31.53■■■□□ 2.64
USF2-204ENST00000593708 NGDNQ8NEJ9 315 aaKnown RBP31.51■■■□□ 2.63
USF2-204ENST00000593708 BTG4Q9NY30 223 aa31.51■■■□□ 2.63
USF2-204ENST00000593708 DEFB132Q7Z7B7 95 aa31.48■■■□□ 2.63
USF2-204ENST00000593708 NUDT16Q96DE0 195 aaKnown RBP31.48■■■□□ 2.63
USF2-204ENST00000593708 PHRF1Q9P1Y6 1649 aaKnown RBP31.48■■■□□ 2.63
USF2-204ENST00000593708 PAK3O75914 559 aaPredicted RBP31.47■■■□□ 2.63
USF2-204ENST00000593708 KRT27Q7Z3Y8 459 aa31.47■■■□□ 2.63
USF2-204ENST00000593708 FAM98CQ17RN3 349 aaKnown RBP31.45■■■□□ 2.63
USF2-204ENST00000593708 CDK19Q9BWU1 502 aa31.44■■■□□ 2.62
USF2-204ENST00000593708 THSD7AQ9UPZ6 1657 aa31.43■■■□□ 2.62
USF2-204ENST00000593708 A0A0G2JS52 829 aa31.41■■■□□ 2.62
USF2-204ENST00000593708 MYT1Q01538 1121 aa31.41■■■□□ 2.62
USF2-204ENST00000593708 NBPF1Q3BBV0 1214 aa31.41■■■□□ 2.62
USF2-204ENST00000593708 POLR3AO14802 1390 aaPredicted RBP31.41■■■□□ 2.62
USF2-204ENST00000593708 SPATA31A5Q5VU36 1347 aa31.4■■■□□ 2.62
USF2-204ENST00000593708 SPATA31A7Q8IWB4 1347 aa31.4■■■□□ 2.62
USF2-204ENST00000593708 PRDM11Q9NQV5 511 aa31.39■■■□□ 2.62
USF2-204ENST00000593708 KIAA0232Q92628 1395 aa31.39■■■□□ 2.62
USF2-204ENST00000593708 ACEP12821 1306 aa31.36■■■□□ 2.61
USF2-204ENST00000593708 SF3B2Q13435 895 aaKnown RBP31.36■■■□□ 2.61
USF2-204ENST00000593708 NUTM2GQ5VZR2 741 aa31.35■■■□□ 2.61
USF2-204ENST00000593708 NRKQ7Z2Y5 1582 aa31.34■■■□□ 2.61
USF2-204ENST00000593708 CHRNA2Q15822 529 aa31.34■■■□□ 2.61
USF2-204ENST00000593708 NBPF8Q3BBV2 869 aa31.33■■■□□ 2.61
USF2-204ENST00000593708 FAM182BQ5T319 152 aa31.33■■■□□ 2.61
USF2-204ENST00000593708 CCDC61Q9Y6R9 512 aa31.33■■■□□ 2.61
USF2-204ENST00000593708 RGPD1P0DJD0 1748 aa31.32■■■□□ 2.61
USF2-204ENST00000593708 QRICH2Q9H0J4 1663 aa31.32■■■□□ 2.6
USF2-204ENST00000593708 PLEKHG3A1L390 1219 aa31.31■■■□□ 2.6
USF2-204ENST00000593708 TNS1Q9HBL0 1735 aaKnown RBP31.3■■■□□ 2.6
USF2-204ENST00000593708 ZC3H6P61129 1189 aaKnown RBP31.29■■■□□ 2.6
USF2-204ENST00000593708 SPATA31A1Q5TZJ5 1347 aa31.28■■■□□ 2.6
USF2-204ENST00000593708 LMO7Q8WWI1 1683 aa31.26■■■□□ 2.6
USF2-204ENST00000593708 PPIP5K1Q6PFW1 1433 aa31.26■■■□□ 2.6
USF2-204ENST00000593708 CENPJQ9HC77 1338 aaPredicted RBP31.25■■■□□ 2.59
USF2-204ENST00000593708 STRN4Q9NRL3 753 aa31.25■■■□□ 2.59
USF2-204ENST00000593708 CAMTA1Q9Y6Y1 1673 aa31.25■■■□□ 2.59
USF2-204ENST00000593708 USP19O94966 1318 aa31.24■■■□□ 2.59
USF2-204ENST00000593708 BAG6P46379 1132 aa31.23■■■□□ 2.59
USF2-204ENST00000593708 SSH2Q76I76 1423 aa31.23■■■□□ 2.59
USF2-204ENST00000593708 SRPK2P78362 688 aaKnown RBP31.22■■■□□ 2.59
USF2-204ENST00000593708 ABTB2Q8N961 1025 aa31.22■■■□□ 2.59
USF2-204ENST00000593708 CABP2Q9NPB3 220 aa31.22■■■□□ 2.59
USF2-204ENST00000593708 LRP5O75197 1615 aa31.22■■■□□ 2.59
USF2-204ENST00000593708 CPDO75976 1380 aa31.2■■■□□ 2.59
USF2-204ENST00000593708 TRPM1Q7Z4N2 1603 aa31.2■■■□□ 2.58
USF2-204ENST00000593708 EN1Q05925 392 aaPredicted RBP31.19■■■□□ 2.58
USF2-204ENST00000593708 L3MBTL2Q969R5 705 aa31.19■■■□□ 2.58
USF2-204ENST00000593708 DISP2A7MBM2 1401 aa31.18■■■□□ 2.58
USF2-204ENST00000593708 PSDA5PKW4 1024 aaPredicted RBP31.17■■■□□ 2.58
USF2-204ENST00000593708 USP35Q9P2H5 1018 aa31.17■■■□□ 2.58
USF2-204ENST00000593708 LARP1Q6PKG0 1096 aaKnown RBP31.15■■■□□ 2.58
USF2-204ENST00000593708 USP6P35125 1406 aa31.14■■■□□ 2.58
USF2-204ENST00000593708 PIK3C2AO00443 1686 aa31.13■■■□□ 2.57
USF2-204ENST00000593708 SIN3AQ96ST3 1273 aa31.12■■■□□ 2.57
USF2-204ENST00000593708 GCP02774 474 aa31.11■■■□□ 2.57
USF2-204ENST00000593708 COL5A2P05997 1499 aaPredicted RBP31.11■■■□□ 2.57
USF2-204ENST00000593708 EVA1CP58658 441 aa31.11■■■□□ 2.57
USF2-204ENST00000593708 BARGINQ6ZT62 677 aa31.11■■■□□ 2.57
USF2-204ENST00000593708 CABP1Q9NZU7 370 aa31.11■■■□□ 2.57
USF2-204ENST00000593708 SLIT3O75094 1523 aa31.1■■■□□ 2.57
USF2-204ENST00000593708 NLRP13Q86W25 1043 aa31.1■■■□□ 2.57
USF2-204ENST00000593708 TRIM37O94972 964 aa31.09■■■□□ 2.57
USF2-204ENST00000593708 BRD4O60885 1362 aaPredicted RBP31.08■■■□□ 2.57
USF2-204ENST00000593708 FAM196AQ6ZSG2 479 aa31.08■■■□□ 2.57
USF2-204ENST00000593708 PARP4Q9UKK3 1724 aaKnown RBP31.07■■■□□ 2.56
USF2-204ENST00000593708 EZH2Q15910 746 aaKnown RBP31.07■■■□□ 2.56
USF2-204ENST00000593708 TCP11L2Q8N4U5 519 aa31.06■■■□□ 2.56
USF2-204ENST00000593708 AKAP12Q02952 1782 aa31.05■■■□□ 2.56
USF2-204ENST00000593708 COL18A1P39060 1754 aa31.05■■■□□ 2.56
USF2-204ENST00000593708 RREB1Q92766 1687 aa31.04■■■□□ 2.56
USF2-204ENST00000593708 CAMKK2Q96RR4 588 aa31.04■■■□□ 2.56
USF2-204ENST00000593708 R3HDM1Q15032 1099 aaKnown RBP31.03■■■□□ 2.56
USF2-204ENST00000593708 NLRP6P59044 892 aa31.02■■■□□ 2.56
USF2-204ENST00000593708 ROCK2O75116 1388 aaKnown RBP31.02■■■□□ 2.56
USF2-204ENST00000593708 EVC2Q86UK5 1308 aa31.01■■■□□ 2.56
USF2-204ENST00000593708 NUP188Q5SRE5 1749 aa31.01■■■□□ 2.55
USF2-204ENST00000593708 PDE3BQ13370 1112 aa31■■■□□ 2.55
USF2-204ENST00000593708 NEUROD1Q13562 356 aa31■■■□□ 2.55
USF2-204ENST00000593708 AATKQ6ZMQ8 1374 aa31■■■□□ 2.55
USF2-204ENST00000593708 CRB1P82279 1406 aa30.99■■■□□ 2.55
USF2-204ENST00000593708 LRRC37A3O60309 1634 aa30.99■■■□□ 2.55
USF2-204ENST00000593708 ZBTB7CA1YPR0 619 aa30.99■■■□□ 2.55
USF2-204ENST00000593708 PEAK1Q9H792 1746 aa30.98■■■□□ 2.55
USF2-204ENST00000593708 APBA3O96018 575 aa30.98■■■□□ 2.55
USF2-204ENST00000593708 THRAP3Q9Y2W1 955 aaKnown RBP30.98■■■□□ 2.55
USF2-204ENST00000593708 WNK3Q9BYP7 1800 aa30.98■■■□□ 2.55
USF2-204ENST00000593708 RGPD5Q99666 1765 aa30.97■■■□□ 2.55
USF2-204ENST00000593708 PARD3Q8TEW0 1356 aa30.96■■■□□ 2.55
USF2-204ENST00000593708 SBF2Q86WG5 1849 aa30.94■■■□□ 2.54
USF2-204ENST00000593708 CPSF1Q10570 1443 aaKnown RBP30.93■■■□□ 2.54
USF2-204ENST00000593708 AXIN2Q9Y2T1 843 aa30.92■■■□□ 2.54
USF2-204ENST00000593708 MON2Q7Z3U7 1717 aa30.92■■■□□ 2.54
USF2-204ENST00000593708 TTC21BQ7Z4L5 1316 aa30.92■■■□□ 2.54
USF2-204ENST00000593708 NFAT5O94916 1531 aa30.9■■■□□ 2.54
USF2-204ENST00000593708 ARHGEF25Q86VW2 580 aa30.87■■■□□ 2.53
USF2-204ENST00000593708 OVOS2A0A0G2JMS6 1433 aa30.87■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms