RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 BTG4Q9NY30 223 aa23.95■■□□□ 1.42
LIG1-205ENST00000593425 HRCP23327 699 aa23.94■■□□□ 1.42
LIG1-205ENST00000593425 KRT27Q7Z3Y8 459 aa23.94■■□□□ 1.42
LIG1-205ENST00000593425 NGDNQ8NEJ9 315 aaKnown RBP23.94■■□□□ 1.42
LIG1-205ENST00000593425 TOPAZ1Q8N9V7 1692 aa23.94■■□□□ 1.42
LIG1-205ENST00000593425 PHRF1Q9P1Y6 1649 aaKnown RBP23.94■■□□□ 1.42
LIG1-205ENST00000593425 KIAA1210Q9ULL0 1709 aa23.92■■□□□ 1.42
LIG1-205ENST00000593425 A0A0G2JS52 829 aa23.91■■□□□ 1.42
LIG1-205ENST00000593425 PAK3O75914 559 aaPredicted RBP23.91■■□□□ 1.42
LIG1-205ENST00000593425 MYT1Q01538 1121 aa23.91■■□□□ 1.42
LIG1-205ENST00000593425 FAM98CQ17RN3 349 aaKnown RBP23.91■■□□□ 1.42
LIG1-205ENST00000593425 SF3B2Q13435 895 aaKnown RBP23.9■■□□□ 1.42
LIG1-205ENST00000593425 NUDT16Q96DE0 195 aaKnown RBP23.9■■□□□ 1.42
LIG1-205ENST00000593425 THSD7AQ9UPZ6 1657 aa23.89■■□□□ 1.42
LIG1-205ENST00000593425 SRCAPQ6ZRS2 3230 aa23.88■■□□□ 1.41
LIG1-205ENST00000593425 SPATA31A5Q5VU36 1347 aa23.86■■□□□ 1.41
LIG1-205ENST00000593425 SPATA31A7Q8IWB4 1347 aa23.86■■□□□ 1.41
LIG1-205ENST00000593425 RGPD1P0DJD0 1748 aa23.85■■□□□ 1.41
LIG1-205ENST00000593425 CDK19Q9BWU1 502 aa23.85■■□□□ 1.41
LIG1-205ENST00000593425 PRDM11Q9NQV5 511 aa23.85■■□□□ 1.41
LIG1-205ENST00000593425 KIAA0232Q92628 1395 aa23.84■■□□□ 1.41
LIG1-205ENST00000593425 POLR3AO14802 1390 aaPredicted RBP23.83■■□□□ 1.41
LIG1-205ENST00000593425 NRKQ7Z2Y5 1582 aa23.82■■□□□ 1.4
LIG1-205ENST00000593425 TNS1Q9HBL0 1735 aaKnown RBP23.82■■□□□ 1.4
LIG1-205ENST00000593425 FAM182BQ5T319 152 aa23.82■■□□□ 1.4
LIG1-205ENST00000593425 CHRNA2Q15822 529 aa23.81■■□□□ 1.4
LIG1-205ENST00000593425 NUTM2GQ5VZR2 741 aa23.81■■□□□ 1.4
LIG1-205ENST00000593425 ACEP12821 1306 aa23.81■■□□□ 1.4
LIG1-205ENST00000593425 NBPF1Q3BBV0 1214 aa23.8■■□□□ 1.4
LIG1-205ENST00000593425 BAG6P46379 1132 aa23.79■■□□□ 1.4
LIG1-205ENST00000593425 CCDC61Q9Y6R9 512 aa23.79■■□□□ 1.4
LIG1-205ENST00000593425 LRP5O75197 1615 aa23.79■■□□□ 1.4
LIG1-205ENST00000593425 NBPF8Q3BBV2 869 aa23.78■■□□□ 1.4
LIG1-205ENST00000593425 SPATA31A1Q5TZJ5 1347 aa23.78■■□□□ 1.4
LIG1-205ENST00000593425 ZC3H6P61129 1189 aaKnown RBP23.77■■□□□ 1.4
LIG1-205ENST00000593425 QRICH2Q9H0J4 1663 aa23.76■■□□□ 1.39
LIG1-205ENST00000593425 PLEKHG3A1L390 1219 aa23.76■■□□□ 1.39
LIG1-205ENST00000593425 STRN4Q9NRL3 753 aa23.76■■□□□ 1.39
LIG1-205ENST00000593425 LMO7Q8WWI1 1683 aa23.76■■□□□ 1.39
LIG1-205ENST00000593425 PSDA5PKW4 1024 aaPredicted RBP23.74■■□□□ 1.39
LIG1-205ENST00000593425 EN1Q05925 392 aaPredicted RBP23.74■■□□□ 1.39
LIG1-205ENST00000593425 CAMTA1Q9Y6Y1 1673 aa23.73■■□□□ 1.39
LIG1-205ENST00000593425 DISP2A7MBM2 1401 aa23.73■■□□□ 1.39
LIG1-205ENST00000593425 PPIP5K1Q6PFW1 1433 aa23.73■■□□□ 1.39
LIG1-205ENST00000593425 SSH2Q76I76 1423 aa23.73■■□□□ 1.39
LIG1-205ENST00000593425 USP19O94966 1318 aa23.71■■□□□ 1.39
LIG1-205ENST00000593425 CENPJQ9HC77 1338 aaPredicted RBP23.71■■□□□ 1.39
LIG1-205ENST00000593425 ABTB2Q8N961 1025 aa23.71■■□□□ 1.39
LIG1-205ENST00000593425 SRPK2P78362 688 aaKnown RBP23.7■■□□□ 1.38
LIG1-205ENST00000593425 USP35Q9P2H5 1018 aa23.7■■□□□ 1.38
LIG1-205ENST00000593425 CPDO75976 1380 aa23.69■■□□□ 1.38
LIG1-205ENST00000593425 CABP2Q9NPB3 220 aa23.69■■□□□ 1.38
LIG1-205ENST00000593425 TRPM1Q7Z4N2 1603 aa23.66■■□□□ 1.38
LIG1-205ENST00000593425 EVA1CP58658 441 aa23.66■■□□□ 1.38
LIG1-205ENST00000593425 LARP1Q6PKG0 1096 aaKnown RBP23.66■■□□□ 1.38
LIG1-205ENST00000593425 TRIM37O94972 964 aa23.65■■□□□ 1.38
LIG1-205ENST00000593425 EZH2Q15910 746 aaKnown RBP23.65■■□□□ 1.38
LIG1-205ENST00000593425 BARGINQ6ZT62 677 aa23.65■■□□□ 1.38
LIG1-205ENST00000593425 COL5A2P05997 1499 aaPredicted RBP23.64■■□□□ 1.38
LIG1-205ENST00000593425 FAM196AQ6ZSG2 479 aa23.64■■□□□ 1.37
LIG1-205ENST00000593425 RREB1Q92766 1687 aa23.64■■□□□ 1.37
LIG1-205ENST00000593425 GCP02774 474 aa23.63■■□□□ 1.37
LIG1-205ENST00000593425 USP6P35125 1406 aa23.63■■□□□ 1.37
LIG1-205ENST00000593425 NLRP13Q86W25 1043 aa23.63■■□□□ 1.37
LIG1-205ENST00000593425 PARP4Q9UKK3 1724 aaKnown RBP23.63■■□□□ 1.37
LIG1-205ENST00000593425 PIK3C2AO00443 1686 aa23.63■■□□□ 1.37
LIG1-205ENST00000593425 R3HDM1Q15032 1099 aaKnown RBP23.62■■□□□ 1.37
LIG1-205ENST00000593425 L3MBTL2Q969R5 705 aa23.62■■□□□ 1.37
LIG1-205ENST00000593425 SLIT3O75094 1523 aa23.62■■□□□ 1.37
LIG1-205ENST00000593425 TCP11L2Q8N4U5 519 aa23.61■■□□□ 1.37
LIG1-205ENST00000593425 CAMKK2Q96RR4 588 aa23.61■■□□□ 1.37
LIG1-205ENST00000593425 BRD4O60885 1362 aaPredicted RBP23.61■■□□□ 1.37
LIG1-205ENST00000593425 CABP1Q9NZU7 370 aa23.6■■□□□ 1.37
LIG1-205ENST00000593425 NUP188Q5SRE5 1749 aa23.59■■□□□ 1.37
LIG1-205ENST00000593425 PDE3BQ13370 1112 aa23.59■■□□□ 1.37
LIG1-205ENST00000593425 COL18A1P39060 1754 aa23.57■■□□□ 1.36
LIG1-205ENST00000593425 APBA3O96018 575 aa23.57■■□□□ 1.36
LIG1-205ENST00000593425 SIN3AQ96ST3 1273 aa23.57■■□□□ 1.36
LIG1-205ENST00000593425 AKAP12Q02952 1782 aa23.57■■□□□ 1.36
LIG1-205ENST00000593425 LRRC37A3O60309 1634 aa23.56■■□□□ 1.36
LIG1-205ENST00000593425 ZBTB7CA1YPR0 619 aa23.56■■□□□ 1.36
LIG1-205ENST00000593425 THRAP3Q9Y2W1 955 aaKnown RBP23.56■■□□□ 1.36
LIG1-205ENST00000593425 CRB1P82279 1406 aa23.56■■□□□ 1.36
LIG1-205ENST00000593425 WNK3Q9BYP7 1800 aa23.56■■□□□ 1.36
LIG1-205ENST00000593425 PARD3Q8TEW0 1356 aa23.55■■□□□ 1.36
LIG1-205ENST00000593425 NLRP6P59044 892 aa23.55■■□□□ 1.36
LIG1-205ENST00000593425 PEAK1Q9H792 1746 aa23.55■■□□□ 1.36
LIG1-205ENST00000593425 EVC2Q86UK5 1308 aa23.54■■□□□ 1.36
LIG1-205ENST00000593425 AATKQ6ZMQ8 1374 aa23.53■■□□□ 1.36
LIG1-205ENST00000593425 ROCK2O75116 1388 aaKnown RBP23.52■■□□□ 1.36
LIG1-205ENST00000593425 RGPD5Q99666 1765 aa23.51■■□□□ 1.35
LIG1-205ENST00000593425 SBF2Q86WG5 1849 aa23.5■■□□□ 1.35
LIG1-205ENST00000593425 CPSF1Q10570 1443 aaKnown RBP23.49■■□□□ 1.35
LIG1-205ENST00000593425 NEUROD1Q13562 356 aa23.48■■□□□ 1.35
LIG1-205ENST00000593425 TTC21BQ7Z4L5 1316 aa23.48■■□□□ 1.35
LIG1-205ENST00000593425 OVOS2A0A0G2JMS6 1433 aa23.48■■□□□ 1.35
LIG1-205ENST00000593425 OVOS2A0A0J9YW53 1432 aa23.48■■□□□ 1.35
LIG1-205ENST00000593425 OVOS2Q6IE36 1432 aa23.48■■□□□ 1.35
LIG1-205ENST00000593425 AXIN2Q9Y2T1 843 aa23.47■■□□□ 1.35
LIG1-205ENST00000593425 MON2Q7Z3U7 1717 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms