RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 CERKQ8TCT0 537 aa24.78■■□□□ 1.56
HDAC5-212ENST00000593013 RCAN3Q9UKA8 241 aa24.78■■□□□ 1.56
HDAC5-212ENST00000593013 SALL2Q9Y467 1007 aaPredicted RBP24.78■■□□□ 1.56
HDAC5-212ENST00000593013 RGPD8O14715 1765 aaPredicted RBP24.77■■□□□ 1.56
HDAC5-212ENST00000593013 ANKARQ7Z5J8 1434 aa24.77■■□□□ 1.56
HDAC5-212ENST00000593013 MSH6P52701 1360 aa24.76■■□□□ 1.55
HDAC5-212ENST00000593013 CDCA7LQ96GN5 454 aa24.76■■□□□ 1.55
HDAC5-212ENST00000593013 CCDC61Q9Y6R9 512 aa24.76■■□□□ 1.55
HDAC5-212ENST00000593013 TOPAZ1Q8N9V7 1692 aa24.76■■□□□ 1.55
HDAC5-212ENST00000593013 NUTM2FA1L443 756 aa24.75■■□□□ 1.55
HDAC5-212ENST00000593013 RRP1P56182 461 aaKnown RBP24.75■■□□□ 1.55
HDAC5-212ENST00000593013 NGEFQ8N5V2 710 aa24.75■■□□□ 1.55
HDAC5-212ENST00000593013 KIF20BQ96Q89 1820 aa24.73■■□□□ 1.55
HDAC5-212ENST00000593013 ATF3P18847 181 aa24.72■■□□□ 1.55
HDAC5-212ENST00000593013 CABP1Q9NZU7 370 aa24.72■■□□□ 1.55
HDAC5-212ENST00000593013 PPIP5K1Q6PFW1 1433 aa24.72■■□□□ 1.55
HDAC5-212ENST00000593013 CADPS2Q86UW7 1296 aa24.72■■□□□ 1.55
HDAC5-212ENST00000593013 ITSN1Q15811 1721 aa24.71■■□□□ 1.55
HDAC5-212ENST00000593013 TERF2IPQ9NYB0 399 aa24.7■■□□□ 1.54
HDAC5-212ENST00000593013 MST1RQ04912 1400 aa24.7■■□□□ 1.54
HDAC5-212ENST00000593013 PLEKHG3A1L390 1219 aa24.69■■□□□ 1.54
HDAC5-212ENST00000593013 C1orf167Q5SNV9 1468 aa24.68■■□□□ 1.54
HDAC5-212ENST00000593013 B4GALNT3Q6L9W6 998 aa24.66■■□□□ 1.54
HDAC5-212ENST00000593013 GOLGA2Q08379 1002 aa24.66■■□□□ 1.54
HDAC5-212ENST00000593013 CPSF1Q10570 1443 aaKnown RBP24.65■■□□□ 1.54
HDAC5-212ENST00000593013 DUSP27Q5VZP5 1158 aa24.65■■□□□ 1.54
HDAC5-212ENST00000593013 CCDC146Q8IYE0 955 aa24.64■■□□□ 1.54
HDAC5-212ENST00000593013 TRMT2AQ8IZ69 625 aaKnown RBP24.64■■□□□ 1.54
HDAC5-212ENST00000593013 CFAP53Q96M91 514 aa24.64■■□□□ 1.53
HDAC5-212ENST00000593013 APAF1O14727 1248 aa24.63■■□□□ 1.53
HDAC5-212ENST00000593013 MTHFSP49914 203 aa24.63■■□□□ 1.53
HDAC5-212ENST00000593013 ORAI2Q96SN7 254 aa24.63■■□□□ 1.53
HDAC5-212ENST00000593013 AKAP12Q02952 1782 aa24.62■■□□□ 1.53
HDAC5-212ENST00000593013 COL3A1P02461 1466 aaPredicted RBP24.62■■□□□ 1.53
HDAC5-212ENST00000593013 SLFN5Q08AF3 891 aa24.62■■□□□ 1.53
HDAC5-212ENST00000593013 ESCO1Q5FWF5 840 aa24.62■■□□□ 1.53
HDAC5-212ENST00000593013 HDGFL2Q7Z4V5 671 aaPredicted RBP24.62■■□□□ 1.53
HDAC5-212ENST00000593013 ACEP12821 1306 aa24.62■■□□□ 1.53
HDAC5-212ENST00000593013 PMFBP1Q8TBY8 1022 aa24.61■■□□□ 1.53
HDAC5-212ENST00000593013 SLAIN2Q9P270 581 aa24.61■■□□□ 1.53
HDAC5-212ENST00000593013 PHF8Q9UPP1 1060 aa24.61■■□□□ 1.53
HDAC5-212ENST00000593013 TNNT2P45379 298 aaPredicted RBP24.59■■□□□ 1.53
HDAC5-212ENST00000593013 NCBP3Q53F19 620 aaKnown RBP24.59■■□□□ 1.53
HDAC5-212ENST00000593013 MON2Q7Z3U7 1717 aa24.59■■□□□ 1.53
HDAC5-212ENST00000593013 FYB1O15117 783 aa24.58■■□□□ 1.53
HDAC5-212ENST00000593013 ZNF692Q9BU19 519 aaPredicted RBP24.58■■□□□ 1.53
HDAC5-212ENST00000593013 UBAP1LF5GYI3 381 aa24.58■■□□□ 1.52
HDAC5-212ENST00000593013 RUNDC1Q96C34 613 aa24.58■■□□□ 1.52
HDAC5-212ENST00000593013 TOM1O60784 492 aa24.57■■□□□ 1.52
HDAC5-212ENST00000593013 KIF1AQ12756 1690 aa24.56■■□□□ 1.52
HDAC5-212ENST00000593013 NGDNQ8NEJ9 315 aaKnown RBP24.56■■□□□ 1.52
HDAC5-212ENST00000593013 E9PSI1 815 aa24.55■■□□□ 1.52
HDAC5-212ENST00000593013 CCDC136Q96JN2 1154 aa24.55■■□□□ 1.52
HDAC5-212ENST00000593013 USP6P35125 1406 aa24.54■■□□□ 1.52
HDAC5-212ENST00000593013 SSH2Q76I76 1423 aa24.54■■□□□ 1.52
HDAC5-212ENST00000593013 BRINP3Q76B58 766 aa24.54■■□□□ 1.52
HDAC5-212ENST00000593013 PHF23Q9BUL5 403 aaPredicted RBP24.54■■□□□ 1.52
HDAC5-212ENST00000593013 GGNBP2Q9H3C7 697 aa24.54■■□□□ 1.52
HDAC5-212ENST00000593013 EDC4Q6P2E9 1401 aaKnown RBP24.54■■□□□ 1.52
HDAC5-212ENST00000593013 NRKQ7Z2Y5 1582 aa24.53■■□□□ 1.52
HDAC5-212ENST00000593013 FOXO3O43524 673 aa24.52■■□□□ 1.52
HDAC5-212ENST00000593013 PNPLA6Q8IY17 1366 aa24.52■■□□□ 1.52
HDAC5-212ENST00000593013 ROBO1Q9Y6N7 1651 aa24.51■■□□□ 1.51
HDAC5-212ENST00000593013 EXOC6Q8TAG9 804 aa24.51■■□□□ 1.51
HDAC5-212ENST00000593013 CCDC27Q2M243 656 aa24.5■■□□□ 1.51
HDAC5-212ENST00000593013 WWC1Q8IX03 1113 aa24.49■■□□□ 1.51
HDAC5-212ENST00000593013 PIP4K2BP78356 416 aa24.49■■□□□ 1.51
HDAC5-212ENST00000593013 SPINK5Q9NQ38 1064 aaPredicted RBP24.49■■□□□ 1.51
HDAC5-212ENST00000593013 RBM19Q9Y4C8 960 aaKnown RBP24.48■■□□□ 1.51
HDAC5-212ENST00000593013 TTC21BQ7Z4L5 1316 aa24.47■■□□□ 1.51
HDAC5-212ENST00000593013 PSME1Q06323 249 aa24.47■■□□□ 1.51
HDAC5-212ENST00000593013 TCP11L2Q8N4U5 519 aa24.47■■□□□ 1.51
HDAC5-212ENST00000593013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.46■■□□□ 1.51
HDAC5-212ENST00000593013 DDX17Q92841 729 aaKnown RBP24.46■■□□□ 1.51
HDAC5-212ENST00000593013 NPHP3Q7Z494 1330 aa24.45■■□□□ 1.5
HDAC5-212ENST00000593013 WDR63Q8IWG1 891 aa24.44■■□□□ 1.5
HDAC5-212ENST00000593013 TRPM3Q9HCF6 1732 aaPredicted RBP24.44■■□□□ 1.5
HDAC5-212ENST00000593013 MAP2P11137 1827 aaKnown RBP24.44■■□□□ 1.5
HDAC5-212ENST00000593013 PXDNQ92626 1479 aa24.43■■□□□ 1.5
HDAC5-212ENST00000593013 TTC21AQ8NDW8 1320 aa24.43■■□□□ 1.5
HDAC5-212ENST00000593013 PLIN1O60240 522 aa24.43■■□□□ 1.5
HDAC5-212ENST00000593013 XPCQ01831 940 aaPredicted RBP24.43■■□□□ 1.5
HDAC5-212ENST00000593013 KRT28Q7Z3Y7 464 aa24.43■■□□□ 1.5
HDAC5-212ENST00000593013 NHSL1Q5SYE7 1610 aa24.43■■□□□ 1.5
HDAC5-212ENST00000593013 U2AF1L5P0DN76 240 aaPredicted RBP24.42■■□□□ 1.5
HDAC5-212ENST00000593013 U2AF1Q01081 240 aaKnown RBP eCLIP24.42■■□□□ 1.5
HDAC5-212ENST00000593013 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.42■■□□□ 1.5
HDAC5-212ENST00000593013 NME9Q86XW9 330 aa24.41■■□□□ 1.5
HDAC5-212ENST00000593013 FBXO41Q8TF61 875 aa24.41■■□□□ 1.5
HDAC5-212ENST00000593013 AATKQ6ZMQ8 1374 aa24.41■■□□□ 1.5
HDAC5-212ENST00000593013 PLEKHF1Q96S99 279 aa24.4■■□□□ 1.5
HDAC5-212ENST00000593013 CRBNQ96SW2 442 aa24.4■■□□□ 1.5
HDAC5-212ENST00000593013 SOS2Q07890 1332 aaPredicted RBP24.4■■□□□ 1.5
HDAC5-212ENST00000593013 PIK3C2AO00443 1686 aa24.4■■□□□ 1.5
HDAC5-212ENST00000593013 CDK12Q9NYV4 1490 aaPredicted RBP24.39■■□□□ 1.49
HDAC5-212ENST00000593013 SBNO1A3KN83 1393 aa24.38■■□□□ 1.49
HDAC5-212ENST00000593013 ZRANB1Q9UGI0 708 aa24.38■■□□□ 1.49
HDAC5-212ENST00000593013 AHDC1Q5TGY3 1603 aaPredicted RBP24.37■■□□□ 1.49
HDAC5-212ENST00000593013 PAK3O75914 559 aaPredicted RBP24.37■■□□□ 1.49
HDAC5-212ENST00000593013 DIAPH1O60610 1272 aaKnown RBP24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms