RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 SSH2Q76I76 1423 aa21.53■■□□□ 1.04
TRIM47-206ENST00000592942 ZNF692Q9BU19 519 aaPredicted RBP21.52■■□□□ 1.04
TRIM47-206ENST00000592942 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
TRIM47-206ENST00000592942 USP6P35125 1406 aa21.51■■□□□ 1.03
TRIM47-206ENST00000592942 HSPA5P11021 654 aaKnown RBP21.5■■□□□ 1.03
TRIM47-206ENST00000592942 TMF1P82094 1093 aa21.5■■□□□ 1.03
TRIM47-206ENST00000592942 CD163L1Q9NR16 1453 aa21.5■■□□□ 1.03
TRIM47-206ENST00000592942 PLEKHG5O94827 1062 aa21.49■■□□□ 1.03
TRIM47-206ENST00000592942 EIF4G2P78344 907 aaKnown RBP eCLIP21.49■■□□□ 1.03
TRIM47-206ENST00000592942 FNBP4Q8N3X1 1017 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-206ENST00000592942 AFF2P51816 1311 aa21.49■■□□□ 1.03
TRIM47-206ENST00000592942 BRD4O60885 1362 aaPredicted RBP21.48■■□□□ 1.03
TRIM47-206ENST00000592942 NUTM2GQ5VZR2 741 aa21.48■■□□□ 1.03
TRIM47-206ENST00000592942 TMC1Q8TDI8 760 aa21.48■■□□□ 1.03
TRIM47-206ENST00000592942 NGLY1Q96IV0 654 aa21.48■■□□□ 1.03
TRIM47-206ENST00000592942 ABTB2Q8N961 1025 aa21.47■■□□□ 1.03
TRIM47-206ENST00000592942 TTC21BQ7Z4L5 1316 aa21.46■■□□□ 1.03
TRIM47-206ENST00000592942 ZNF772Q68DY9 489 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-206ENST00000592942 AKAP12Q02952 1782 aa21.45■■□□□ 1.02
TRIM47-206ENST00000592942 FAM83GA6ND36 823 aa21.44■■□□□ 1.02
TRIM47-206ENST00000592942 KTN1Q86UP2 1357 aaKnown RBP21.43■■□□□ 1.02
TRIM47-206ENST00000592942 ABCA3Q99758 1704 aa21.43■■□□□ 1.02
TRIM47-206ENST00000592942 CRYBG1Q9Y4K1 1723 aa21.43■■□□□ 1.02
TRIM47-206ENST00000592942 USP19O94966 1318 aa21.42■■□□□ 1.02
TRIM47-206ENST00000592942 MARF1Q9Y4F3 1742 aaKnown RBP21.42■■□□□ 1.02
TRIM47-206ENST00000592942 BCL9LQ86UU0 1499 aa21.41■■□□□ 1.02
TRIM47-206ENST00000592942 A0A1W2PP64 1363 aa21.41■■□□□ 1.02
TRIM47-206ENST00000592942 C11orf95C9JLR9 678 aaPredicted RBP21.41■■□□□ 1.02
TRIM47-206ENST00000592942 HAP1P54257 671 aaPredicted RBP21.41■■□□□ 1.02
TRIM47-206ENST00000592942 NLRP13Q86W25 1043 aa21.41■■□□□ 1.02
TRIM47-206ENST00000592942 USP21Q9UK80 565 aa21.41■■□□□ 1.02
TRIM47-206ENST00000592942 NINLQ9Y2I6 1382 aa21.4■■□□□ 1.02
TRIM47-206ENST00000592942 NLRP6P59044 892 aa21.4■■□□□ 1.02
TRIM47-206ENST00000592942 CDCA8Q53HL2 280 aa21.4■■□□□ 1.02
TRIM47-206ENST00000592942 HDGFL2Q7Z4V5 671 aaPredicted RBP21.4■■□□□ 1.02
TRIM47-206ENST00000592942 QTRT2Q9H974 415 aaKnown RBP21.4■■□□□ 1.02
TRIM47-206ENST00000592942 TERF2IPQ9NYB0 399 aa21.4■■□□□ 1.02
TRIM47-206ENST00000592942 SLIT2O94813 1529 aa21.39■■□□□ 1.02
TRIM47-206ENST00000592942 TTC21AQ8NDW8 1320 aa21.39■■□□□ 1.01
TRIM47-206ENST00000592942 MON2Q7Z3U7 1717 aa21.38■■□□□ 1.01
TRIM47-206ENST00000592942 ZRANB1Q9UGI0 708 aa21.38■■□□□ 1.01
TRIM47-206ENST00000592942 NRKQ7Z2Y5 1582 aa21.37■■□□□ 1.01
TRIM47-206ENST00000592942 GCP02774 474 aa21.37■■□□□ 1.01
TRIM47-206ENST00000592942 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.37■■□□□ 1.01
TRIM47-206ENST00000592942 PIK3C2AO00443 1686 aa21.37■■□□□ 1.01
TRIM47-206ENST00000592942 ZC3H6P61129 1189 aaKnown RBP21.36■■□□□ 1.01
TRIM47-206ENST00000592942 NME9Q86XW9 330 aa21.35■■□□□ 1.01
TRIM47-206ENST00000592942 UNC5CLQ8IV45 518 aa21.35■■□□□ 1.01
TRIM47-206ENST00000592942 EDC4Q6P2E9 1401 aaKnown RBP21.35■■□□□ 1.01
TRIM47-206ENST00000592942 ANKRD36BQ8N2N9 1353 aa21.35■■□□□ 1.01
TRIM47-206ENST00000592942 KIAA0232Q92628 1395 aa21.35■■□□□ 1.01
TRIM47-206ENST00000592942 PHRF1Q9P1Y6 1649 aaKnown RBP21.34■■□□□ 1.01
TRIM47-206ENST00000592942 USP31Q70CQ4 1352 aa21.34■■□□□ 1.01
TRIM47-206ENST00000592942 ATRNO75882 1429 aa21.33■■□□□ 1.01
TRIM47-206ENST00000592942 RXRBP28702 533 aa21.33■■□□□ 1.01
TRIM47-206ENST00000592942 CARD14Q9BXL6 1004 aa21.33■■□□□ 1.01
TRIM47-206ENST00000592942 TRPC5Q9UL62 973 aaPredicted RBP21.33■■□□□ 1.01
TRIM47-206ENST00000592942 CHRNA2Q15822 529 aa21.32■■□□□ 1
TRIM47-206ENST00000592942 SLIT3O75094 1523 aa21.32■■□□□ 1
TRIM47-206ENST00000592942 RBM6P78332 1123 aaKnown RBP21.31■■□□□ 1
TRIM47-206ENST00000592942 PRDM11Q9NQV5 511 aa21.31■■□□□ 1
TRIM47-206ENST00000592942 BTG4Q9NY30 223 aa21.31■■□□□ 1
TRIM47-206ENST00000592942 CPDO75976 1380 aa21.31■■□□□ 1
TRIM47-206ENST00000592942 MYOM1P52179 1685 aa21.29■■□□□ 1
TRIM47-206ENST00000592942 FYB1O15117 783 aa21.28■■□□□ 1
TRIM47-206ENST00000592942 VPS72Q15906 364 aa21.28■■□□□ 1
TRIM47-206ENST00000592942 GJD4Q96KN9 370 aaPredicted RBP21.28■■□□□ 1
TRIM47-206ENST00000592942 COL14A1Q05707 1796 aaKnown RBP21.28■■□□□ 1
TRIM47-206ENST00000592942 PLCH1Q4KWH8 1693 aa21.28■■□□□ 1
TRIM47-206ENST00000592942 ARHGEF25Q86VW2 580 aa21.27■■□□□ 1
TRIM47-206ENST00000592942 POLR3GLQ9BT43 218 aa21.27■■□□□ 1
TRIM47-206ENST00000592942 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.26■□□□□ 0.99
TRIM47-206ENST00000592942 NWD2Q9ULI1 1742 aa21.26■□□□□ 0.99
TRIM47-206ENST00000592942 KCNH5Q8NCM2 988 aa21.26■□□□□ 0.99
TRIM47-206ENST00000592942 UPF1Q92900 1129 aaKnown RBP eCLIP21.26■□□□□ 0.99
TRIM47-206ENST00000592942 KIF7Q2M1P5 1343 aa21.25■□□□□ 0.99
TRIM47-206ENST00000592942 USP54Q70EL1 1684 aa21.24■□□□□ 0.99
TRIM47-206ENST00000592942 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
TRIM47-206ENST00000592942 NRAPQ86VF7 1730 aa21.24■□□□□ 0.99
TRIM47-206ENST00000592942 OVOS2A0A0J9YW53 1432 aa21.24■□□□□ 0.99
TRIM47-206ENST00000592942 OVOS2Q6IE36 1432 aa21.24■□□□□ 0.99
TRIM47-206ENST00000592942 SOX12O15370 315 aa21.23■□□□□ 0.99
TRIM47-206ENST00000592942 AXIN2Q9Y2T1 843 aa21.23■□□□□ 0.99
TRIM47-206ENST00000592942 CDK12Q9NYV4 1490 aaPredicted RBP21.23■□□□□ 0.99
TRIM47-206ENST00000592942 NFAT5O94916 1531 aa21.23■□□□□ 0.99
TRIM47-206ENST00000592942 AATKQ6ZMQ8 1374 aa21.23■□□□□ 0.99
TRIM47-206ENST00000592942 LMO7Q8WWI1 1683 aa21.22■□□□□ 0.99
TRIM47-206ENST00000592942 PANK3Q9H999 370 aa21.22■□□□□ 0.99
TRIM47-206ENST00000592942 COL18A1P39060 1754 aa21.21■□□□□ 0.99
TRIM47-206ENST00000592942 ONECUT3O60422 494 aaPredicted RBP21.21■□□□□ 0.99
TRIM47-206ENST00000592942 FBLN1P23142 703 aa21.21■□□□□ 0.99
TRIM47-206ENST00000592942 GGNBP2Q9H3C7 697 aa21.21■□□□□ 0.99
TRIM47-206ENST00000592942 GLI3P10071 1580 aa21.21■□□□□ 0.99
TRIM47-206ENST00000592942 RGS12O14924 1447 aa21.2■□□□□ 0.98
TRIM47-206ENST00000592942 NSD3Q9BZ95 1437 aa21.2■□□□□ 0.98
TRIM47-206ENST00000592942 COG3Q96JB2 828 aa21.19■□□□□ 0.98
TRIM47-206ENST00000592942 SPATA31A5Q5VU36 1347 aa21.19■□□□□ 0.98
TRIM47-206ENST00000592942 SPATA31A7Q8IWB4 1347 aa21.19■□□□□ 0.98
TRIM47-206ENST00000592942 ZBTB7CA1YPR0 619 aa21.18■□□□□ 0.98
TRIM47-206ENST00000592942 STRN4Q9NRL3 753 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms