RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 CDK19Q9BWU1 502 aa19.18■□□□□ 0.66
APOC1-209ENST00000592885 FAM83GA6ND36 823 aa19.16■□□□□ 0.66
APOC1-209ENST00000592885 NBPF1Q3BBV0 1214 aa19.16■□□□□ 0.66
APOC1-209ENST00000592885 CCDC61Q9Y6R9 512 aa19.16■□□□□ 0.66
APOC1-209ENST00000592885 CENPJQ9HC77 1338 aaPredicted RBP19.16■□□□□ 0.66
APOC1-209ENST00000592885 ONECUT3O60422 494 aaPredicted RBP19.15■□□□□ 0.66
APOC1-209ENST00000592885 PLEKHG3A1L390 1219 aa19.14■□□□□ 0.65
APOC1-209ENST00000592885 PAK3O75914 559 aaPredicted RBP19.14■□□□□ 0.65
APOC1-209ENST00000592885 PLEKHG5O94827 1062 aa19.14■□□□□ 0.65
APOC1-209ENST00000592885 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
APOC1-209ENST00000592885 CCDC9Q9Y3X0 531 aaKnown RBP19.13■□□□□ 0.65
APOC1-209ENST00000592885 BRD4O60885 1362 aaPredicted RBP19.13■□□□□ 0.65
APOC1-209ENST00000592885 EP400Q96L91 3159 aa19.13■□□□□ 0.65
APOC1-209ENST00000592885 NRKQ7Z2Y5 1582 aa19.12■□□□□ 0.65
APOC1-209ENST00000592885 ACEP12821 1306 aa19.12■□□□□ 0.65
APOC1-209ENST00000592885 SEPT12Q8IYM1 358 aa19.12■□□□□ 0.65
APOC1-209ENST00000592885 L3MBTL2Q969R5 705 aa19.12■□□□□ 0.65
APOC1-209ENST00000592885 BTG4Q9NY30 223 aa19.12■□□□□ 0.65
APOC1-209ENST00000592885 PPIP5K1Q6PFW1 1433 aa19.11■□□□□ 0.65
APOC1-209ENST00000592885 THSD7AQ9UPZ6 1657 aa19.11■□□□□ 0.65
APOC1-209ENST00000592885 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
APOC1-209ENST00000592885 SRPK2P78362 688 aaKnown RBP19.09■□□□□ 0.65
APOC1-209ENST00000592885 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
APOC1-209ENST00000592885 KIAA0232Q92628 1395 aa19.07■□□□□ 0.64
APOC1-209ENST00000592885 SPATA31A5Q5VU36 1347 aa19.07■□□□□ 0.64
APOC1-209ENST00000592885 SPATA31A7Q8IWB4 1347 aa19.07■□□□□ 0.64
APOC1-209ENST00000592885 KRT27Q7Z3Y8 459 aa19.07■□□□□ 0.64
APOC1-209ENST00000592885 ROCK2O75116 1388 aaKnown RBP19.06■□□□□ 0.64
APOC1-209ENST00000592885 USP19O94966 1318 aa19.06■□□□□ 0.64
APOC1-209ENST00000592885 LMO7Q8WWI1 1683 aa19.05■□□□□ 0.64
APOC1-209ENST00000592885 SIN3AQ96ST3 1273 aa19.05■□□□□ 0.64
APOC1-209ENST00000592885 CPDO75976 1380 aa19.05■□□□□ 0.64
APOC1-209ENST00000592885 EVC2Q86UK5 1308 aa19.04■□□□□ 0.64
APOC1-209ENST00000592885 RGPD1P0DJD0 1748 aa19.04■□□□□ 0.64
APOC1-209ENST00000592885 USP6P35125 1406 aa19.04■□□□□ 0.64
APOC1-209ENST00000592885 FAM98CQ17RN3 349 aaKnown RBP19.04■□□□□ 0.64
APOC1-209ENST00000592885 CABP2Q9NPB3 220 aa19.04■□□□□ 0.64
APOC1-209ENST00000592885 ZRANB1Q9UGI0 708 aa19.04■□□□□ 0.64
APOC1-209ENST00000592885 A0A0G2JS52 829 aa19.03■□□□□ 0.64
APOC1-209ENST00000592885 MYT1Q01538 1121 aa19.03■□□□□ 0.64
APOC1-209ENST00000592885 SF3B2Q13435 895 aaKnown RBP19.03■□□□□ 0.64
APOC1-209ENST00000592885 ABTB2Q8N961 1025 aa19.03■□□□□ 0.64
APOC1-209ENST00000592885 AKAP12Q02952 1782 aa19.01■□□□□ 0.63
APOC1-209ENST00000592885 SLIT3O75094 1523 aa19.01■□□□□ 0.63
APOC1-209ENST00000592885 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
APOC1-209ENST00000592885 NLRP13Q86W25 1043 aa19.01■□□□□ 0.63
APOC1-209ENST00000592885 SPATA31A1Q5TZJ5 1347 aa19■□□□□ 0.63
APOC1-209ENST00000592885 SSH2Q76I76 1423 aa19■□□□□ 0.63
APOC1-209ENST00000592885 ZC3H6P61129 1189 aaKnown RBP19■□□□□ 0.63
APOC1-209ENST00000592885 NUTM2GQ5VZR2 741 aa19■□□□□ 0.63
APOC1-209ENST00000592885 SBNO2Q9Y2G9 1366 aa19■□□□□ 0.63
APOC1-209ENST00000592885 PIK3C2AO00443 1686 aa18.99■□□□□ 0.63
APOC1-209ENST00000592885 CAMTA1Q9Y6Y1 1673 aa18.98■□□□□ 0.63
APOC1-209ENST00000592885 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
APOC1-209ENST00000592885 CABP1Q9NZU7 370 aa18.98■□□□□ 0.63
APOC1-209ENST00000592885 TNS1Q9HBL0 1735 aaKnown RBP18.97■□□□□ 0.63
APOC1-209ENST00000592885 GCP02774 474 aa18.96■□□□□ 0.63
APOC1-209ENST00000592885 DISP2A7MBM2 1401 aa18.95■□□□□ 0.62
APOC1-209ENST00000592885 BAG6P46379 1132 aa18.95■□□□□ 0.62
APOC1-209ENST00000592885 BARGINQ6ZT62 677 aa18.95■□□□□ 0.62
APOC1-209ENST00000592885 STRN4Q9NRL3 753 aa18.95■□□□□ 0.62
APOC1-209ENST00000592885 COL5A2P05997 1499 aaPredicted RBP18.95■□□□□ 0.62
APOC1-209ENST00000592885 TONSLQ96HA7 1378 aa18.94■□□□□ 0.62
APOC1-209ENST00000592885 MON2Q7Z3U7 1717 aa18.94■□□□□ 0.62
APOC1-209ENST00000592885 DEFB132Q7Z7B7 95 aa18.94■□□□□ 0.62
APOC1-209ENST00000592885 ZNF692Q9BU19 519 aaPredicted RBP18.94■□□□□ 0.62
APOC1-209ENST00000592885 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
APOC1-209ENST00000592885 CPSF1Q10570 1443 aaKnown RBP18.93■□□□□ 0.62
APOC1-209ENST00000592885 EVA1CP58658 441 aa18.93■□□□□ 0.62
APOC1-209ENST00000592885 USP54Q70EL1 1684 aa18.92■□□□□ 0.62
APOC1-209ENST00000592885 NLRP6P59044 892 aa18.92■□□□□ 0.62
APOC1-209ENST00000592885 THRAP3Q9Y2W1 955 aaKnown RBP18.92■□□□□ 0.62
APOC1-209ENST00000592885 TTC21AQ8NDW8 1320 aa18.92■□□□□ 0.62
APOC1-209ENST00000592885 AATKQ6ZMQ8 1374 aa18.92■□□□□ 0.62
APOC1-209ENST00000592885 ABCC6O95255 1503 aa18.91■□□□□ 0.62
APOC1-209ENST00000592885 COL18A1P39060 1754 aa18.91■□□□□ 0.62
APOC1-209ENST00000592885 CRB1P82279 1406 aa18.91■□□□□ 0.62
APOC1-209ENST00000592885 TCP11L2Q8N4U5 519 aa18.9■□□□□ 0.62
APOC1-209ENST00000592885 CARD11Q9BXL7 1154 aa18.9■□□□□ 0.62
APOC1-209ENST00000592885 WNK3Q9BYP7 1800 aa18.9■□□□□ 0.62
APOC1-209ENST00000592885 LARP1Q6PKG0 1096 aaKnown RBP18.89■□□□□ 0.61
APOC1-209ENST00000592885 FAM196AQ6ZSG2 479 aa18.89■□□□□ 0.61
APOC1-209ENST00000592885 TTC21BQ7Z4L5 1316 aa18.89■□□□□ 0.61
APOC1-209ENST00000592885 LRP5O75197 1615 aa18.89■□□□□ 0.61
APOC1-209ENST00000592885 KTN1Q86UP2 1357 aaKnown RBP18.87■□□□□ 0.61
APOC1-209ENST00000592885 KCNH5Q8NCM2 988 aa18.87■□□□□ 0.61
APOC1-209ENST00000592885 USP35Q9P2H5 1018 aa18.87■□□□□ 0.61
APOC1-209ENST00000592885 LRRC37A3O60309 1634 aa18.86■□□□□ 0.61
APOC1-209ENST00000592885 NFAT5O94916 1531 aa18.86■□□□□ 0.61
APOC1-209ENST00000592885 PARD3Q8TEW0 1356 aa18.86■□□□□ 0.61
APOC1-209ENST00000592885 C11orf95C9JLR9 678 aaPredicted RBP18.86■□□□□ 0.61
APOC1-209ENST00000592885 PDE3BQ13370 1112 aa18.85■□□□□ 0.61
APOC1-209ENST00000592885 FAM182BQ5T319 152 aa18.85■□□□□ 0.61
APOC1-209ENST00000592885 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
APOC1-209ENST00000592885 RREB1Q92766 1687 aa18.84■□□□□ 0.61
APOC1-209ENST00000592885 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
APOC1-209ENST00000592885 PUS7Q96PZ0 661 aaKnown RBP18.83■□□□□ 0.6
APOC1-209ENST00000592885 PEAK1Q9H792 1746 aa18.83■□□□□ 0.6
APOC1-209ENST00000592885 USP31Q70CQ4 1352 aa18.82■□□□□ 0.6
APOC1-209ENST00000592885 WDR17Q8IZU2 1322 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms