RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 SPATA31A6Q5VVP1 1343 aa13.84□□□□□ -0.19
TPM4-216ENST00000592822 A0A1W2PP64 1363 aa13.83□□□□□ -0.19
TPM4-216ENST00000592822 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.19
TPM4-216ENST00000592822 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.19
TPM4-216ENST00000592822 LMOD2Q6P5Q4 547 aa13.83□□□□□ -0.2
TPM4-216ENST00000592822 HDGFL2Q7Z4V5 671 aaPredicted RBP13.83□□□□□ -0.2
TPM4-216ENST00000592822 POLR3GLQ9BT43 218 aa13.83□□□□□ -0.2
TPM4-216ENST00000592822 TERF2IPQ9NYB0 399 aa13.83□□□□□ -0.2
TPM4-216ENST00000592822 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
TPM4-216ENST00000592822 LRP6O75581 1613 aa13.82□□□□□ -0.2
TPM4-216ENST00000592822 KIF7Q2M1P5 1343 aa13.82□□□□□ -0.2
TPM4-216ENST00000592822 TTC21BQ7Z4L5 1316 aa13.82□□□□□ -0.2
TPM4-216ENST00000592822 ANKRD36BQ8N2N9 1353 aa13.82□□□□□ -0.2
TPM4-216ENST00000592822 MED1Q15648 1581 aaPredicted RBP13.81□□□□□ -0.2
TPM4-216ENST00000592822 NUTM2BA6NNL0 878 aaPredicted RBP13.81□□□□□ -0.2
TPM4-216ENST00000592822 NUTM2EB1AL46 878 aaPredicted RBP13.81□□□□□ -0.2
TPM4-216ENST00000592822 NUTM2AQ8IVF1 878 aaPredicted RBP13.81□□□□□ -0.2
TPM4-216ENST00000592822 PIK3C2AO00443 1686 aa13.81□□□□□ -0.2
TPM4-216ENST00000592822 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
TPM4-216ENST00000592822 CRYBG1Q9Y4K1 1723 aa13.81□□□□□ -0.2
TPM4-216ENST00000592822 NUTM2GQ5VZR2 741 aa13.8□□□□□ -0.2
TPM4-216ENST00000592822 ABTB2Q8N961 1025 aa13.8□□□□□ -0.2
TPM4-216ENST00000592822 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
TPM4-216ENST00000592822 CCDC7Q96M83 1385 aa13.8□□□□□ -0.2
TPM4-216ENST00000592822 EDC4Q6P2E9 1401 aaKnown RBP13.8□□□□□ -0.2
TPM4-216ENST00000592822 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
TPM4-216ENST00000592822 WASHC2AQ641Q2 1341 aa13.79□□□□□ -0.2
TPM4-216ENST00000592822 MARF1Q9Y4F3 1742 aaKnown RBP13.78□□□□□ -0.2
TPM4-216ENST00000592822 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.78□□□□□ -0.2
TPM4-216ENST00000592822 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
TPM4-216ENST00000592822 TTC21AQ8NDW8 1320 aa13.78□□□□□ -0.2
TPM4-216ENST00000592822 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
TPM4-216ENST00000592822 PHRF1Q9P1Y6 1649 aaKnown RBP13.77□□□□□ -0.21
TPM4-216ENST00000592822 USP19O94966 1318 aa13.76□□□□□ -0.21
TPM4-216ENST00000592822 NLRP6P59044 892 aa13.76□□□□□ -0.21
TPM4-216ENST00000592822 NLRP13Q86W25 1043 aa13.76□□□□□ -0.21
TPM4-216ENST00000592822 NME9Q86XW9 330 aa13.76□□□□□ -0.21
TPM4-216ENST00000592822 PANK3Q9H999 370 aa13.76□□□□□ -0.21
TPM4-216ENST00000592822 ZRANB1Q9UGI0 708 aa13.76□□□□□ -0.21
TPM4-216ENST00000592822 USP54Q70EL1 1684 aa13.75□□□□□ -0.21
TPM4-216ENST00000592822 USP31Q70CQ4 1352 aa13.74□□□□□ -0.21
TPM4-216ENST00000592822 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
TPM4-216ENST00000592822 MEX3CQ5U5Q3 659 aaKnown RBP13.74□□□□□ -0.21
TPM4-216ENST00000592822 SLIT3O75094 1523 aa13.74□□□□□ -0.21
TPM4-216ENST00000592822 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
TPM4-216ENST00000592822 KIF20BQ96Q89 1820 aa13.73□□□□□ -0.21
TPM4-216ENST00000592822 FYB1O15117 783 aa13.72□□□□□ -0.21
TPM4-216ENST00000592822 OVOS2A0A0J9YW53 1432 aa13.72□□□□□ -0.21
TPM4-216ENST00000592822 OVOS2Q6IE36 1432 aa13.72□□□□□ -0.21
TPM4-216ENST00000592822 GCP02774 474 aa13.71□□□□□ -0.21
TPM4-216ENST00000592822 C8orf37Q96NL8 207 aa13.71□□□□□ -0.21
TPM4-216ENST00000592822 ZC3H6P61129 1189 aaKnown RBP13.7□□□□□ -0.22
TPM4-216ENST00000592822 NGLY1Q96IV0 654 aa13.7□□□□□ -0.22
TPM4-216ENST00000592822 GGNBP2Q9H3C7 697 aa13.7□□□□□ -0.22
TPM4-216ENST00000592822 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
TPM4-216ENST00000592822 KIAA0232Q92628 1395 aa13.7□□□□□ -0.22
TPM4-216ENST00000592822 NFAT5O94916 1531 aa13.69□□□□□ -0.22
TPM4-216ENST00000592822 AFF2P51816 1311 aa13.69□□□□□ -0.22
TPM4-216ENST00000592822 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
TPM4-216ENST00000592822 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
TPM4-216ENST00000592822 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
TPM4-216ENST00000592822 CGNL1Q0VF96 1302 aa13.68□□□□□ -0.22
TPM4-216ENST00000592822 SOX12O15370 315 aa13.68□□□□□ -0.22
TPM4-216ENST00000592822 PER1O15534 1290 aaPredicted RBP13.68□□□□□ -0.22
TPM4-216ENST00000592822 FNBP4Q8N3X1 1017 aaPredicted RBP13.68□□□□□ -0.22
TPM4-216ENST00000592822 COG3Q96JB2 828 aa13.68□□□□□ -0.22
TPM4-216ENST00000592822 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
TPM4-216ENST00000592822 CPDO75976 1380 aa13.68□□□□□ -0.22
TPM4-216ENST00000592822 KCNH5Q8NCM2 988 aa13.67□□□□□ -0.22
TPM4-216ENST00000592822 PRDM11Q9NQV5 511 aa13.67□□□□□ -0.22
TPM4-216ENST00000592822 SLIT2O94813 1529 aa13.67□□□□□ -0.22
TPM4-216ENST00000592822 ANKRD26Q9UPS8 1709 aa13.67□□□□□ -0.22
TPM4-216ENST00000592822 CHRNA2Q15822 529 aa13.66□□□□□ -0.22
TPM4-216ENST00000592822 NWD2Q9ULI1 1742 aa13.66□□□□□ -0.22
TPM4-216ENST00000592822 BCL9LQ86UU0 1499 aa13.66□□□□□ -0.22
TPM4-216ENST00000592822 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
TPM4-216ENST00000592822 COL18A1P39060 1754 aa13.66□□□□□ -0.22
TPM4-216ENST00000592822 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
TPM4-216ENST00000592822 ARHGEF25Q86VW2 580 aa13.65□□□□□ -0.22
TPM4-216ENST00000592822 USP21Q9UK80 565 aa13.65□□□□□ -0.22
TPM4-216ENST00000592822 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
TPM4-216ENST00000592822 LTN1O94822 1766 aa13.65□□□□□ -0.22
TPM4-216ENST00000592822 NRAPQ86VF7 1730 aa13.64□□□□□ -0.23
TPM4-216ENST00000592822 FBLN1P23142 703 aa13.64□□□□□ -0.23
TPM4-216ENST00000592822 ZNF772Q68DY9 489 aaPredicted RBP13.64□□□□□ -0.23
TPM4-216ENST00000592822 BTG4Q9NY30 223 aa13.64□□□□□ -0.23
TPM4-216ENST00000592822 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.64□□□□□ -0.23
TPM4-216ENST00000592822 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
TPM4-216ENST00000592822 NSD2O96028 1365 aa13.63□□□□□ -0.23
TPM4-216ENST00000592822 AATKQ6ZMQ8 1374 aa13.63□□□□□ -0.23
TPM4-216ENST00000592822 ZBTB7CA1YPR0 619 aa13.63□□□□□ -0.23
TPM4-216ENST00000592822 POTEAQ6S8J7 498 aa13.63□□□□□ -0.23
TPM4-216ENST00000592822 RGPD5Q99666 1765 aa13.63□□□□□ -0.23
TPM4-216ENST00000592822 UNC5CLQ8IV45 518 aa13.62□□□□□ -0.23
TPM4-216ENST00000592822 ZNF316A6NFI3 1004 aaPredicted RBP13.61□□□□□ -0.23
TPM4-216ENST00000592822 DDX10Q13206 875 aaKnown RBP13.61□□□□□ -0.23
TPM4-216ENST00000592822 AXIN2Q9Y2T1 843 aa13.61□□□□□ -0.23
TPM4-216ENST00000592822 ATRNO75882 1429 aa13.61□□□□□ -0.23
TPM4-216ENST00000592822 ABCC6O95255 1503 aa13.6□□□□□ -0.23
TPM4-216ENST00000592822 QTRT2Q9H974 415 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms