RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 EVC2Q86UK5 1308 aa13.86□□□□□ -0.19
PRKCSH-215ENST00000592435 ALS2Q96Q42 1657 aa13.85□□□□□ -0.19
PRKCSH-215ENST00000592435 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
PRKCSH-215ENST00000592435 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
PRKCSH-215ENST00000592435 ATAD2Q6PL18 1390 aa13.84□□□□□ -0.19
PRKCSH-215ENST00000592435 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.84□□□□□ -0.19
PRKCSH-215ENST00000592435 CABP1Q9NZU7 370 aa13.84□□□□□ -0.19
PRKCSH-215ENST00000592435 RALGAPBQ86X10 1494 aa13.84□□□□□ -0.19
PRKCSH-215ENST00000592435 BRD4O60885 1362 aaPredicted RBP13.83□□□□□ -0.19
PRKCSH-215ENST00000592435 TONSLQ96HA7 1378 aa13.83□□□□□ -0.19
PRKCSH-215ENST00000592435 PPIP5K1Q6PFW1 1433 aa13.83□□□□□ -0.2
PRKCSH-215ENST00000592435 BTG4Q9NY30 223 aa13.83□□□□□ -0.2
PRKCSH-215ENST00000592435 TOPAZ1Q8N9V7 1692 aa13.82□□□□□ -0.2
PRKCSH-215ENST00000592435 ABTB2Q8N961 1025 aa13.82□□□□□ -0.2
PRKCSH-215ENST00000592435 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
PRKCSH-215ENST00000592435 ABCA3Q99758 1704 aa13.81□□□□□ -0.2
PRKCSH-215ENST00000592435 NWD2Q9ULI1 1742 aa13.81□□□□□ -0.2
PRKCSH-215ENST00000592435 NLRP13Q86W25 1043 aa13.81□□□□□ -0.2
PRKCSH-215ENST00000592435 CCDC125Q86Z20 511 aa13.81□□□□□ -0.2
PRKCSH-215ENST00000592435 CARD11Q9BXL7 1154 aa13.81□□□□□ -0.2
PRKCSH-215ENST00000592435 PRDM11Q9NQV5 511 aa13.81□□□□□ -0.2
PRKCSH-215ENST00000592435 QRICH2Q9H0J4 1663 aa13.81□□□□□ -0.2
PRKCSH-215ENST00000592435 GLI3P10071 1580 aa13.8□□□□□ -0.2
PRKCSH-215ENST00000592435 NUTM2GQ5VZR2 741 aa13.8□□□□□ -0.2
PRKCSH-215ENST00000592435 SEPT12Q8IYM1 358 aa13.8□□□□□ -0.2
PRKCSH-215ENST00000592435 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
PRKCSH-215ENST00000592435 ZC3H6P61129 1189 aaKnown RBP13.79□□□□□ -0.2
PRKCSH-215ENST00000592435 KIAA0232Q92628 1395 aa13.79□□□□□ -0.2
PRKCSH-215ENST00000592435 SBNO2Q9Y2G9 1366 aa13.79□□□□□ -0.2
PRKCSH-215ENST00000592435 PLCH1Q4KWH8 1693 aa13.79□□□□□ -0.2
PRKCSH-215ENST00000592435 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
PRKCSH-215ENST00000592435 USP19O94966 1318 aa13.78□□□□□ -0.2
PRKCSH-215ENST00000592435 GCP02774 474 aa13.77□□□□□ -0.21
PRKCSH-215ENST00000592435 USP6P35125 1406 aa13.77□□□□□ -0.21
PRKCSH-215ENST00000592435 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
PRKCSH-215ENST00000592435 SPATA31A5Q5VU36 1347 aa13.77□□□□□ -0.21
PRKCSH-215ENST00000592435 SPATA31A7Q8IWB4 1347 aa13.77□□□□□ -0.21
PRKCSH-215ENST00000592435 CRYBG1Q9Y4K1 1723 aa13.77□□□□□ -0.21
PRKCSH-215ENST00000592435 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
PRKCSH-215ENST00000592435 CPDO75976 1380 aa13.76□□□□□ -0.21
PRKCSH-215ENST00000592435 NLRP6P59044 892 aa13.76□□□□□ -0.21
PRKCSH-215ENST00000592435 FAM98CQ17RN3 349 aaKnown RBP13.75□□□□□ -0.21
PRKCSH-215ENST00000592435 KRT27Q7Z3Y8 459 aa13.75□□□□□ -0.21
PRKCSH-215ENST00000592435 EP400Q96L91 3159 aa13.74□□□□□ -0.21
PRKCSH-215ENST00000592435 SLC24A1O60721 1099 aa13.74□□□□□ -0.21
PRKCSH-215ENST00000592435 EVA1CP58658 441 aa13.74□□□□□ -0.21
PRKCSH-215ENST00000592435 PUS7Q96PZ0 661 aaKnown RBP13.74□□□□□ -0.21
PRKCSH-215ENST00000592435 CPSF1Q10570 1443 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-215ENST00000592435 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
PRKCSH-215ENST00000592435 SPATA31A1Q5TZJ5 1347 aa13.73□□□□□ -0.21
PRKCSH-215ENST00000592435 PHRF1Q9P1Y6 1649 aaKnown RBP13.73□□□□□ -0.21
PRKCSH-215ENST00000592435 STRN4Q9NRL3 753 aa13.73□□□□□ -0.21
PRKCSH-215ENST00000592435 TTC21BQ7Z4L5 1316 aa13.72□□□□□ -0.21
PRKCSH-215ENST00000592435 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
PRKCSH-215ENST00000592435 A0A0G2JS52 829 aa13.72□□□□□ -0.21
PRKCSH-215ENST00000592435 MYT1Q01538 1121 aa13.72□□□□□ -0.21
PRKCSH-215ENST00000592435 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
PRKCSH-215ENST00000592435 BLMP54132 1417 aaPredicted RBP13.71□□□□□ -0.22
PRKCSH-215ENST00000592435 NRKQ7Z2Y5 1582 aa13.71□□□□□ -0.22
PRKCSH-215ENST00000592435 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.22
PRKCSH-215ENST00000592435 CLSPNQ9HAW4 1339 aa13.7□□□□□ -0.22
PRKCSH-215ENST00000592435 CAMTA1Q9Y6Y1 1673 aa13.7□□□□□ -0.22
PRKCSH-215ENST00000592435 ST20-MTHFSA0A0A6YYL1 179 aa13.7□□□□□ -0.22
PRKCSH-215ENST00000592435 BARGINQ6ZT62 677 aa13.7□□□□□ -0.22
PRKCSH-215ENST00000592435 KCNH5Q8NCM2 988 aa13.7□□□□□ -0.22
PRKCSH-215ENST00000592435 AATKQ6ZMQ8 1374 aa13.7□□□□□ -0.22
PRKCSH-215ENST00000592435 LARP1Q6PKG0 1096 aaKnown RBP13.69□□□□□ -0.22
PRKCSH-215ENST00000592435 TESK2Q96S53 571 aa13.69□□□□□ -0.22
PRKCSH-215ENST00000592435 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-215ENST00000592435 TMC1Q8TDI8 760 aa13.68□□□□□ -0.22
PRKCSH-215ENST00000592435 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
PRKCSH-215ENST00000592435 THRAP3Q9Y2W1 955 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-215ENST00000592435 BRWD3Q6RI45 1802 aa13.68□□□□□ -0.22
PRKCSH-215ENST00000592435 SLIT3O75094 1523 aa13.68□□□□□ -0.22
PRKCSH-215ENST00000592435 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-215ENST00000592435 ARHGEF25Q86VW2 580 aa13.67□□□□□ -0.22
PRKCSH-215ENST00000592435 TCP11L2Q8N4U5 519 aa13.67□□□□□ -0.22
PRKCSH-215ENST00000592435 TERF2IPQ9NYB0 399 aa13.67□□□□□ -0.22
PRKCSH-215ENST00000592435 USP35Q9P2H5 1018 aa13.67□□□□□ -0.22
PRKCSH-215ENST00000592435 LMO7Q8WWI1 1683 aa13.66□□□□□ -0.22
PRKCSH-215ENST00000592435 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
PRKCSH-215ENST00000592435 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKCSH-215ENST00000592435 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
PRKCSH-215ENST00000592435 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
PRKCSH-215ENST00000592435 COL5A2P05997 1499 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-215ENST00000592435 CD163L1Q9NR16 1453 aa13.65□□□□□ -0.22
PRKCSH-215ENST00000592435 PIK3C2AO00443 1686 aa13.65□□□□□ -0.22
PRKCSH-215ENST00000592435 AKAP12Q02952 1782 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 THSD7AQ9UPZ6 1657 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 NINLQ9Y2I6 1382 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 ZBTB7CA1YPR0 619 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 FAM182BQ5T319 152 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 FAM196AQ6ZSG2 479 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 DEFB132Q7Z7B7 95 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 AXIN2Q9Y2T1 843 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 CRB1P82279 1406 aa13.64□□□□□ -0.23
PRKCSH-215ENST00000592435 PDE3BQ13370 1112 aa13.63□□□□□ -0.23
PRKCSH-215ENST00000592435 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
PRKCSH-215ENST00000592435 BAG6P46379 1132 aa13.62□□□□□ -0.23
PRKCSH-215ENST00000592435 TMF1P82094 1093 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms