RNA–Protein interactions for RNA: ENST00000592013.1

TNFRSF11A-204, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 2

Gene TNFRSF11A, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-204ENST00000592013 PLEKHG3A1L390 1219 aa28.31■■■□□ 2.12
TNFRSF11A-204ENST00000592013 SRPK2P78362 688 aaKnown RBP28.31■■■□□ 2.12
TNFRSF11A-204ENST00000592013 NBPF1Q3BBV0 1214 aa28.31■■■□□ 2.12
TNFRSF11A-204ENST00000592013 BTG4Q9NY30 223 aa28.3■■■□□ 2.12
TNFRSF11A-204ENST00000592013 ONECUT3O60422 494 aaPredicted RBP28.29■■■□□ 2.12
TNFRSF11A-204ENST00000592013 SEPT12Q8IYM1 358 aa28.29■■■□□ 2.12
TNFRSF11A-204ENST00000592013 L3MBTL2Q969R5 705 aa28.29■■■□□ 2.12
TNFRSF11A-204ENST00000592013 BRD4O60885 1362 aaPredicted RBP28.28■■■□□ 2.12
TNFRSF11A-204ENST00000592013 ACEP12821 1306 aa28.28■■■□□ 2.12
TNFRSF11A-204ENST00000592013 SF3B2Q13435 895 aaKnown RBP28.28■■■□□ 2.12
TNFRSF11A-204ENST00000592013 NBPF8Q3BBV2 869 aa28.28■■■□□ 2.12
TNFRSF11A-204ENST00000592013 PRDM11Q9NQV5 511 aa28.28■■■□□ 2.12
TNFRSF11A-204ENST00000592013 TOPAZ1Q8N9V7 1692 aa28.26■■■□□ 2.12
TNFRSF11A-204ENST00000592013 A0A0G2JS52 829 aa28.26■■■□□ 2.11
TNFRSF11A-204ENST00000592013 MYT1Q01538 1121 aa28.26■■■□□ 2.11
TNFRSF11A-204ENST00000592013 BLMP54132 1417 aaPredicted RBP28.25■■■□□ 2.11
TNFRSF11A-204ENST00000592013 KRT27Q7Z3Y8 459 aa28.23■■■□□ 2.11
TNFRSF11A-204ENST00000592013 ZRANB1Q9UGI0 708 aa28.23■■■□□ 2.11
TNFRSF11A-204ENST00000592013 EVC2Q86UK5 1308 aa28.22■■■□□ 2.11
TNFRSF11A-204ENST00000592013 NEUROD1Q13562 356 aa28.22■■■□□ 2.11
TNFRSF11A-204ENST00000592013 PPIP5K1Q6PFW1 1433 aa28.22■■■□□ 2.11
TNFRSF11A-204ENST00000592013 ABTB2Q8N961 1025 aa28.22■■■□□ 2.11
TNFRSF11A-204ENST00000592013 ROCK2O75116 1388 aaKnown RBP28.21■■■□□ 2.11
TNFRSF11A-204ENST00000592013 NRAPQ86VF7 1730 aa28.21■■■□□ 2.11
TNFRSF11A-204ENST00000592013 QRICH2Q9H0J4 1663 aa28.2■■■□□ 2.11
TNFRSF11A-204ENST00000592013 CRYBG1Q9Y4K1 1723 aa28.19■■■□□ 2.1
TNFRSF11A-204ENST00000592013 NLRP13Q86W25 1043 aa28.19■■■□□ 2.1
TNFRSF11A-204ENST00000592013 KIAA0232Q92628 1395 aa28.17■■■□□ 2.1
TNFRSF11A-204ENST00000592013 FAM98CQ17RN3 349 aaKnown RBP28.17■■■□□ 2.1
TNFRSF11A-204ENST00000592013 SIN3AQ96ST3 1273 aa28.17■■■□□ 2.1
TNFRSF11A-204ENST00000592013 TRPM1Q7Z4N2 1603 aa28.17■■■□□ 2.1
TNFRSF11A-204ENST00000592013 EP400Q96L91 3159 aa28.17■■■□□ 2.1
TNFRSF11A-204ENST00000592013 SPATA31A5Q5VU36 1347 aa28.17■■■□□ 2.1
TNFRSF11A-204ENST00000592013 SPATA31A7Q8IWB4 1347 aa28.17■■■□□ 2.1
TNFRSF11A-204ENST00000592013 CABP2Q9NPB3 220 aa28.16■■■□□ 2.1
TNFRSF11A-204ENST00000592013 PHRF1Q9P1Y6 1649 aaKnown RBP28.15■■■□□ 2.1
TNFRSF11A-204ENST00000592013 BRWD3Q6RI45 1802 aa28.14■■■□□ 2.1
TNFRSF11A-204ENST00000592013 EVA1CP58658 441 aa28.14■■■□□ 2.1
TNFRSF11A-204ENST00000592013 ZC3H6P61129 1189 aaKnown RBP28.13■■■□□ 2.09
TNFRSF11A-204ENST00000592013 NUTM2GQ5VZR2 741 aa28.12■■■□□ 2.09
TNFRSF11A-204ENST00000592013 CPDO75976 1380 aa28.11■■■□□ 2.09
TNFRSF11A-204ENST00000592013 ZNF692Q9BU19 519 aaPredicted RBP28.11■■■□□ 2.09
TNFRSF11A-204ENST00000592013 CABP1Q9NZU7 370 aa28.1■■■□□ 2.09
TNFRSF11A-204ENST00000592013 USP19O94966 1318 aa28.1■■■□□ 2.09
TNFRSF11A-204ENST00000592013 CHRNA2Q15822 529 aa28.08■■■□□ 2.09
TNFRSF11A-204ENST00000592013 STRN4Q9NRL3 753 aa28.08■■■□□ 2.09
TNFRSF11A-204ENST00000592013 SPATA31A1Q5TZJ5 1347 aa28.08■■■□□ 2.09
TNFRSF11A-204ENST00000592013 USP6P35125 1406 aa28.08■■■□□ 2.09
TNFRSF11A-204ENST00000592013 BAG6P46379 1132 aa28.07■■■□□ 2.08
TNFRSF11A-204ENST00000592013 TONSLQ96HA7 1378 aa28.07■■■□□ 2.08
TNFRSF11A-204ENST00000592013 GCP02774 474 aa28.06■■■□□ 2.08
TNFRSF11A-204ENST00000592013 NRKQ7Z2Y5 1582 aa28.06■■■□□ 2.08
TNFRSF11A-204ENST00000592013 NLRP6P59044 892 aa28.04■■■□□ 2.08
TNFRSF11A-204ENST00000592013 SSH2Q76I76 1423 aa28.02■■■□□ 2.08
TNFRSF11A-204ENST00000592013 SBNO2Q9Y2G9 1366 aa28.02■■■□□ 2.08
TNFRSF11A-204ENST00000592013 BARGINQ6ZT62 677 aa28.02■■■□□ 2.08
TNFRSF11A-204ENST00000592013 CARD11Q9BXL7 1154 aa28.02■■■□□ 2.08
TNFRSF11A-204ENST00000592013 THRAP3Q9Y2W1 955 aaKnown RBP28.02■■■□□ 2.08
TNFRSF11A-204ENST00000592013 THSD7AQ9UPZ6 1657 aa28.01■■■□□ 2.07
TNFRSF11A-204ENST00000592013 C11orf95C9JLR9 678 aaPredicted RBP28■■■□□ 2.07
TNFRSF11A-204ENST00000592013 SLC24A1O60721 1099 aa28■■■□□ 2.07
TNFRSF11A-204ENST00000592013 KCNH5Q8NCM2 988 aa28■■■□□ 2.07
TNFRSF11A-204ENST00000592013 TTC21AQ8NDW8 1320 aa27.99■■■□□ 2.07
TNFRSF11A-204ENST00000592013 FAM196AQ6ZSG2 479 aa27.99■■■□□ 2.07
TNFRSF11A-204ENST00000592013 TCP11L2Q8N4U5 519 aa27.99■■■□□ 2.07
TNFRSF11A-204ENST00000592013 PDE3BQ13370 1112 aa27.98■■■□□ 2.07
TNFRSF11A-204ENST00000592013 TRIM26Q12899 539 aaPredicted RBP27.97■■■□□ 2.07
TNFRSF11A-204ENST00000592013 DEFB132Q7Z7B7 95 aa27.97■■■□□ 2.07
TNFRSF11A-204ENST00000592013 USP35Q9P2H5 1018 aa27.97■■■□□ 2.07
TNFRSF11A-204ENST00000592013 RGPD1P0DJD0 1748 aa27.97■■■□□ 2.07
TNFRSF11A-204ENST00000592013 AATKQ6ZMQ8 1374 aa27.96■■■□□ 2.07
TNFRSF11A-204ENST00000592013 LMO7Q8WWI1 1683 aa27.95■■■□□ 2.07
TNFRSF11A-204ENST00000592013 CAMTA1Q9Y6Y1 1673 aa27.95■■■□□ 2.07
TNFRSF11A-204ENST00000592013 SLIT3O75094 1523 aa27.94■■■□□ 2.06
TNFRSF11A-204ENST00000592013 LARP1Q6PKG0 1096 aaKnown RBP27.93■■■□□ 2.06
TNFRSF11A-204ENST00000592013 TTC21BQ7Z4L5 1316 aa27.92■■■□□ 2.06
TNFRSF11A-204ENST00000592013 KTN1Q86UP2 1357 aaKnown RBP27.92■■■□□ 2.06
TNFRSF11A-204ENST00000592013 CRB1P82279 1406 aa27.92■■■□□ 2.06
TNFRSF11A-204ENST00000592013 COL5A2P05997 1499 aaPredicted RBP27.91■■■□□ 2.06
TNFRSF11A-204ENST00000592013 ZBTB7CA1YPR0 619 aa27.91■■■□□ 2.06
TNFRSF11A-204ENST00000592013 DISP2A7MBM2 1401 aa27.9■■■□□ 2.06
TNFRSF11A-204ENST00000592013 CPSF1Q10570 1443 aaKnown RBP27.9■■■□□ 2.06
TNFRSF11A-204ENST00000592013 HDGFL2Q7Z4V5 671 aaPredicted RBP27.89■■■□□ 2.06
TNFRSF11A-204ENST00000592013 PUS7Q96PZ0 661 aaKnown RBP27.89■■■□□ 2.06
TNFRSF11A-204ENST00000592013 AKAP12Q02952 1782 aa27.88■■■□□ 2.05
TNFRSF11A-204ENST00000592013 PIK3C2AO00443 1686 aa27.88■■■□□ 2.05
TNFRSF11A-204ENST00000592013 PARD3Q8TEW0 1356 aa27.87■■■□□ 2.05
TNFRSF11A-204ENST00000592013 CDCA7Q9BWT1 371 aaPredicted RBP27.86■■■□□ 2.05
TNFRSF11A-204ENST00000592013 TERF2IPQ9NYB0 399 aa27.86■■■□□ 2.05
TNFRSF11A-204ENST00000592013 FAM182BQ5T319 152 aa27.85■■■□□ 2.05
TNFRSF11A-204ENST00000592013 TOM1L2Q6ZVM7 507 aa27.85■■■□□ 2.05
TNFRSF11A-204ENST00000592013 TMC1Q8TDI8 760 aa27.83■■■□□ 2.05
TNFRSF11A-204ENST00000592013 TRIM37O94972 964 aa27.82■■■□□ 2.04
TNFRSF11A-204ENST00000592013 EN1Q05925 392 aaPredicted RBP27.82■■■□□ 2.04
TNFRSF11A-204ENST00000592013 ARHGEF25Q86VW2 580 aa27.82■■■□□ 2.04
TNFRSF11A-204ENST00000592013 WDR17Q8IZU2 1322 aa27.82■■■□□ 2.04
TNFRSF11A-204ENST00000592013 NINLQ9Y2I6 1382 aa27.82■■■□□ 2.04
TNFRSF11A-204ENST00000592013 ABCC6O95255 1503 aa27.82■■■□□ 2.04
TNFRSF11A-204ENST00000592013 PARP4Q9UKK3 1724 aaKnown RBP27.8■■■□□ 2.04
TNFRSF11A-204ENST00000592013 MON2Q7Z3U7 1717 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms