RNA–Protein interactions for RNA: ENST00000591974.5

LINC01539-205, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-205ENST00000591974 MTHFSP49914 203 aa14.09□□□□□ -0.15
LINC01539-205ENST00000591974 CFAP53Q96M91 514 aa14.09□□□□□ -0.15
LINC01539-205ENST00000591974 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
LINC01539-205ENST00000591974 USP54Q70EL1 1684 aa14.08□□□□□ -0.15
LINC01539-205ENST00000591974 ADAMTS8Q9UP79 889 aa14.08□□□□□ -0.16
LINC01539-205ENST00000591974 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
LINC01539-205ENST00000591974 DCCP43146 1447 aa14.08□□□□□ -0.16
LINC01539-205ENST00000591974 C14orf37Q86TY3 774 aa14.08□□□□□ -0.16
LINC01539-205ENST00000591974 NME9Q86XW9 330 aa14.08□□□□□ -0.16
LINC01539-205ENST00000591974 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
LINC01539-205ENST00000591974 PMFBP1Q8TBY8 1022 aa14.08□□□□□ -0.16
LINC01539-205ENST00000591974 AATKQ6ZMQ8 1374 aa14.07□□□□□ -0.16
LINC01539-205ENST00000591974 XIRP1Q702N8 1843 aaKnown RBP14.07□□□□□ -0.16
LINC01539-205ENST00000591974 RBM33Q96EV2 1170 aaKnown RBP14.07□□□□□ -0.16
LINC01539-205ENST00000591974 COG3Q96JB2 828 aa14.07□□□□□ -0.16
LINC01539-205ENST00000591974 OVOS2A0A0J9YW53 1432 aa14.07□□□□□ -0.16
LINC01539-205ENST00000591974 OVOS2Q6IE36 1432 aa14.07□□□□□ -0.16
LINC01539-205ENST00000591974 PIK3C2AO00443 1686 aa14.06□□□□□ -0.16
LINC01539-205ENST00000591974 KIF1AQ12756 1690 aa14.06□□□□□ -0.16
LINC01539-205ENST00000591974 SMG6Q86US8 1419 aaKnown RBP14.06□□□□□ -0.16
LINC01539-205ENST00000591974 COL3A1P02461 1466 aaPredicted RBP14.06□□□□□ -0.16
LINC01539-205ENST00000591974 ADRA2BP18089 450 aa14.06□□□□□ -0.16
LINC01539-205ENST00000591974 C19orf44Q9H6X5 657 aa14.06□□□□□ -0.16
LINC01539-205ENST00000591974 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
LINC01539-205ENST00000591974 TMEM94Q12767 1356 aa14.05□□□□□ -0.16
LINC01539-205ENST00000591974 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
LINC01539-205ENST00000591974 LRRC7Q96NW7 1537 aa14.04□□□□□ -0.16
LINC01539-205ENST00000591974 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
LINC01539-205ENST00000591974 MARF1Q9Y4F3 1742 aaKnown RBP14.03□□□□□ -0.16
LINC01539-205ENST00000591974 CDK12Q9NYV4 1490 aaPredicted RBP14.03□□□□□ -0.16
LINC01539-205ENST00000591974 ZRANB1Q9UGI0 708 aa14.02□□□□□ -0.16
LINC01539-205ENST00000591974 C1orf167Q5SNV9 1468 aa14.02□□□□□ -0.17
LINC01539-205ENST00000591974 POLKQ9UBT6 870 aa14.01□□□□□ -0.17
LINC01539-205ENST00000591974 ESCO1Q5FWF5 840 aa14.01□□□□□ -0.17
LINC01539-205ENST00000591974 NUDCQ9Y266 331 aa14□□□□□ -0.17
LINC01539-205ENST00000591974 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
LINC01539-205ENST00000591974 MST1RQ04912 1400 aa14□□□□□ -0.17
LINC01539-205ENST00000591974 MSH6P52701 1360 aa14□□□□□ -0.17
LINC01539-205ENST00000591974 ATF3P18847 181 aa13.99□□□□□ -0.17
LINC01539-205ENST00000591974 NGEFQ8N5V2 710 aa13.99□□□□□ -0.17
LINC01539-205ENST00000591974 GTF3C3Q9Y5Q9 886 aa13.99□□□□□ -0.17
LINC01539-205ENST00000591974 PDE3BQ13370 1112 aa13.99□□□□□ -0.17
LINC01539-205ENST00000591974 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
LINC01539-205ENST00000591974 TRPM3Q9HCF6 1732 aaPredicted RBP13.99□□□□□ -0.17
LINC01539-205ENST00000591974 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
LINC01539-205ENST00000591974 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
LINC01539-205ENST00000591974 IQSEC2Q5JU85 1478 aa13.97□□□□□ -0.17
LINC01539-205ENST00000591974 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
LINC01539-205ENST00000591974 FBLN1P23142 703 aa13.97□□□□□ -0.17
LINC01539-205ENST00000591974 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
LINC01539-205ENST00000591974 ORAI2Q96SN7 254 aa13.97□□□□□ -0.17
LINC01539-205ENST00000591974 PEAK1Q9H792 1746 aa13.96□□□□□ -0.17
LINC01539-205ENST00000591974 PSME1Q06323 249 aa13.96□□□□□ -0.17
LINC01539-205ENST00000591974 RUNDC1Q96C34 613 aa13.96□□□□□ -0.17
LINC01539-205ENST00000591974 SENP3-EIF4A1A0A087X0R7 540 aa13.95□□□□□ -0.18
LINC01539-205ENST00000591974 U2AF1L5P0DN76 240 aaPredicted RBP13.95□□□□□ -0.18
LINC01539-205ENST00000591974 U2AF1Q01081 240 aaKnown RBP eCLIP13.95□□□□□ -0.18
LINC01539-205ENST00000591974 APAF1O14727 1248 aa13.95□□□□□ -0.18
LINC01539-205ENST00000591974 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
LINC01539-205ENST00000591974 NLRP6P59044 892 aa13.95□□□□□ -0.18
LINC01539-205ENST00000591974 RRS1Q15050 365 aaKnown RBP13.95□□□□□ -0.18
LINC01539-205ENST00000591974 ABTB2Q8N961 1025 aa13.95□□□□□ -0.18
LINC01539-205ENST00000591974 LTN1O94822 1766 aa13.94□□□□□ -0.18
LINC01539-205ENST00000591974 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
LINC01539-205ENST00000591974 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
LINC01539-205ENST00000591974 ALS2Q96Q42 1657 aa13.94□□□□□ -0.18
LINC01539-205ENST00000591974 ZNF521Q96K83 1311 aa13.94□□□□□ -0.18
LINC01539-205ENST00000591974 U2SURPO15042 1029 aaKnown RBP13.93□□□□□ -0.18
LINC01539-205ENST00000591974 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
LINC01539-205ENST00000591974 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
LINC01539-205ENST00000591974 KIF24Q5T7B8 1368 aa13.93□□□□□ -0.18
LINC01539-205ENST00000591974 FOXO3O43524 673 aa13.93□□□□□ -0.18
LINC01539-205ENST00000591974 SBNO1A3KN83 1393 aa13.92□□□□□ -0.18
LINC01539-205ENST00000591974 PHRF1Q9P1Y6 1649 aaKnown RBP13.92□□□□□ -0.18
LINC01539-205ENST00000591974 RGPD1P0DJD0 1748 aa13.92□□□□□ -0.18
LINC01539-205ENST00000591974 FLT4P35916 1363 aa13.92□□□□□ -0.18
LINC01539-205ENST00000591974 IL13P35225 146 aa13.91□□□□□ -0.18
LINC01539-205ENST00000591974 NFAT5O94916 1531 aa13.91□□□□□ -0.18
LINC01539-205ENST00000591974 SLIT3O75094 1523 aa13.91□□□□□ -0.18
LINC01539-205ENST00000591974 FCHSD2O94868 740 aa13.91□□□□□ -0.18
LINC01539-205ENST00000591974 PLEKHF1Q96S99 279 aa13.91□□□□□ -0.18
LINC01539-205ENST00000591974 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.18
LINC01539-205ENST00000591974 KRT28Q7Z3Y7 464 aa13.9□□□□□ -0.18
LINC01539-205ENST00000591974 TCP11L2Q8N4U5 519 aa13.9□□□□□ -0.18
LINC01539-205ENST00000591974 NPHP3Q7Z494 1330 aa13.89□□□□□ -0.19
LINC01539-205ENST00000591974 RTL1A6NKG5 1358 aa13.89□□□□□ -0.19
LINC01539-205ENST00000591974 GOLGA2Q08379 1002 aa13.89□□□□□ -0.19
LINC01539-205ENST00000591974 CCDC27Q2M243 656 aa13.89□□□□□ -0.19
LINC01539-205ENST00000591974 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
LINC01539-205ENST00000591974 SOX12O15370 315 aa13.88□□□□□ -0.19
LINC01539-205ENST00000591974 KCNH5Q8NCM2 988 aa13.88□□□□□ -0.19
LINC01539-205ENST00000591974 RSPH6AQ9H0K4 717 aa13.88□□□□□ -0.19
LINC01539-205ENST00000591974 MAPK8IP3Q9UPT6 1336 aa13.88□□□□□ -0.19
LINC01539-205ENST00000591974 NEFLP07196 543 aa13.87□□□□□ -0.19
LINC01539-205ENST00000591974 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
LINC01539-205ENST00000591974 PXDNQ92626 1479 aa13.87□□□□□ -0.19
LINC01539-205ENST00000591974 CDCA7LQ96GN5 454 aa13.87□□□□□ -0.19
LINC01539-205ENST00000591974 SUPT16HQ9Y5B9 1047 aaKnown RBP13.87□□□□□ -0.19
LINC01539-205ENST00000591974 USP19O94966 1318 aa13.87□□□□□ -0.19
LINC01539-205ENST00000591974 AMPHP49418 695 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms