RNA–Protein interactions for RNA: ENST00000591600.1

APOC4-201, Transcript of apolipoprotein C4, humanhuman

TSL 3 BASIC

Gene APOC4, Length 348 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-201ENST00000591600 PLEKHG5O94827 1062 aa22.36■■□□□ 1.17
APOC4-201ENST00000591600 TOPAZ1Q8N9V7 1692 aa22.36■■□□□ 1.17
APOC4-201ENST00000591600 NUDT16Q96DE0 195 aaKnown RBP22.35■■□□□ 1.17
APOC4-201ENST00000591600 BTG4Q9NY30 223 aa22.34■■□□□ 1.17
APOC4-201ENST00000591600 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
APOC4-201ENST00000591600 KRT27Q7Z3Y8 459 aa22.32■■□□□ 1.16
APOC4-201ENST00000591600 POLR3AO14802 1390 aaPredicted RBP22.31■■□□□ 1.16
APOC4-201ENST00000591600 PAK3O75914 559 aaPredicted RBP22.31■■□□□ 1.16
APOC4-201ENST00000591600 CDK19Q9BWU1 502 aa22.31■■□□□ 1.16
APOC4-201ENST00000591600 PHRF1Q9P1Y6 1649 aaKnown RBP22.31■■□□□ 1.16
APOC4-201ENST00000591600 CCDC61Q9Y6R9 512 aa22.3■■□□□ 1.16
APOC4-201ENST00000591600 SRCAPQ6ZRS2 3230 aa22.28■■□□□ 1.16
APOC4-201ENST00000591600 PLEKHG3A1L390 1219 aa22.28■■□□□ 1.16
APOC4-201ENST00000591600 SF3B2Q13435 895 aaKnown RBP22.28■■□□□ 1.16
APOC4-201ENST00000591600 SPATA31A5Q5VU36 1347 aa22.27■■□□□ 1.16
APOC4-201ENST00000591600 SPATA31A7Q8IWB4 1347 aa22.27■■□□□ 1.16
APOC4-201ENST00000591600 FAM98CQ17RN3 349 aaKnown RBP22.26■■□□□ 1.15
APOC4-201ENST00000591600 NBPF1Q3BBV0 1214 aa22.26■■□□□ 1.15
APOC4-201ENST00000591600 PRDM11Q9NQV5 511 aa22.26■■□□□ 1.15
APOC4-201ENST00000591600 THSD7AQ9UPZ6 1657 aa22.26■■□□□ 1.15
APOC4-201ENST00000591600 NBPF8Q3BBV2 869 aa22.25■■□□□ 1.15
APOC4-201ENST00000591600 ACEP12821 1306 aa22.25■■□□□ 1.15
APOC4-201ENST00000591600 DEFB132Q7Z7B7 95 aa22.24■■□□□ 1.15
APOC4-201ENST00000591600 KIAA0232Q92628 1395 aa22.23■■□□□ 1.15
APOC4-201ENST00000591600 RGPD1P0DJD0 1748 aa22.23■■□□□ 1.15
APOC4-201ENST00000591600 QRICH2Q9H0J4 1663 aa22.21■■□□□ 1.15
APOC4-201ENST00000591600 A0A0G2JS52 829 aa22.21■■□□□ 1.15
APOC4-201ENST00000591600 MYT1Q01538 1121 aa22.21■■□□□ 1.15
APOC4-201ENST00000591600 CENPJQ9HC77 1338 aaPredicted RBP22.2■■□□□ 1.14
APOC4-201ENST00000591600 SPATA31A1Q5TZJ5 1347 aa22.19■■□□□ 1.14
APOC4-201ENST00000591600 NRKQ7Z2Y5 1582 aa22.19■■□□□ 1.14
APOC4-201ENST00000591600 BRD4O60885 1362 aaPredicted RBP22.18■■□□□ 1.14
APOC4-201ENST00000591600 PPIP5K1Q6PFW1 1433 aa22.17■■□□□ 1.14
APOC4-201ENST00000591600 BAG6P46379 1132 aa22.17■■□□□ 1.14
APOC4-201ENST00000591600 ABTB2Q8N961 1025 aa22.17■■□□□ 1.14
APOC4-201ENST00000591600 LMO7Q8WWI1 1683 aa22.17■■□□□ 1.14
APOC4-201ENST00000591600 CPDO75976 1380 aa22.16■■□□□ 1.14
APOC4-201ENST00000591600 ZC3H6P61129 1189 aaKnown RBP22.16■■□□□ 1.14
APOC4-201ENST00000591600 SRPK2P78362 688 aaKnown RBP22.16■■□□□ 1.14
APOC4-201ENST00000591600 CHRNA2Q15822 529 aa22.16■■□□□ 1.14
APOC4-201ENST00000591600 NUTM2GQ5VZR2 741 aa22.16■■□□□ 1.14
APOC4-201ENST00000591600 TRPM1Q7Z4N2 1603 aa22.16■■□□□ 1.14
APOC4-201ENST00000591600 TNS1Q9HBL0 1735 aaKnown RBP22.15■■□□□ 1.14
APOC4-201ENST00000591600 USP19O94966 1318 aa22.15■■□□□ 1.14
APOC4-201ENST00000591600 L3MBTL2Q969R5 705 aa22.14■■□□□ 1.13
APOC4-201ENST00000591600 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.13
APOC4-201ENST00000591600 NLRP13Q86W25 1043 aa22.13■■□□□ 1.13
APOC4-201ENST00000591600 CABP2Q9NPB3 220 aa22.13■■□□□ 1.13
APOC4-201ENST00000591600 DISP2A7MBM2 1401 aa22.13■■□□□ 1.13
APOC4-201ENST00000591600 SSH2Q76I76 1423 aa22.13■■□□□ 1.13
APOC4-201ENST00000591600 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
APOC4-201ENST00000591600 STRN4Q9NRL3 753 aa22.12■■□□□ 1.13
APOC4-201ENST00000591600 LRP5O75197 1615 aa22.12■■□□□ 1.13
APOC4-201ENST00000591600 GCP02774 474 aa22.1■■□□□ 1.13
APOC4-201ENST00000591600 EVA1CP58658 441 aa22.1■■□□□ 1.13
APOC4-201ENST00000591600 FAM182BQ5T319 152 aa22.1■■□□□ 1.13
APOC4-201ENST00000591600 USP6P35125 1406 aa22.09■■□□□ 1.13
APOC4-201ENST00000591600 FAM196AQ6ZSG2 479 aa22.09■■□□□ 1.13
APOC4-201ENST00000591600 CABP1Q9NZU7 370 aa22.08■■□□□ 1.13
APOC4-201ENST00000591600 EN1Q05925 392 aaPredicted RBP22.07■■□□□ 1.12
APOC4-201ENST00000591600 EVC2Q86UK5 1308 aa22.06■■□□□ 1.12
APOC4-201ENST00000591600 LARP1Q6PKG0 1096 aaKnown RBP22.06■■□□□ 1.12
APOC4-201ENST00000591600 THRAP3Q9Y2W1 955 aaKnown RBP22.06■■□□□ 1.12
APOC4-201ENST00000591600 AKAP12Q02952 1782 aa22.06■■□□□ 1.12
APOC4-201ENST00000591600 PARP4Q9UKK3 1724 aaKnown RBP22.06■■□□□ 1.12
APOC4-201ENST00000591600 SLIT3O75094 1523 aa22.06■■□□□ 1.12
APOC4-201ENST00000591600 TCP11L2Q8N4U5 519 aa22.05■■□□□ 1.12
APOC4-201ENST00000591600 SIN3AQ96ST3 1273 aa22.05■■□□□ 1.12
APOC4-201ENST00000591600 USP35Q9P2H5 1018 aa22.05■■□□□ 1.12
APOC4-201ENST00000591600 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
APOC4-201ENST00000591600 COL5A2P05997 1499 aaPredicted RBP22.04■■□□□ 1.12
APOC4-201ENST00000591600 COL18A1P39060 1754 aa22.03■■□□□ 1.12
APOC4-201ENST00000591600 AATKQ6ZMQ8 1374 aa22.02■■□□□ 1.12
APOC4-201ENST00000591600 PARD3Q8TEW0 1356 aa22.02■■□□□ 1.12
APOC4-201ENST00000591600 NLRP6P59044 892 aa22.02■■□□□ 1.12
APOC4-201ENST00000591600 PDE3BQ13370 1112 aa22.02■■□□□ 1.12
APOC4-201ENST00000591600 ZNF692Q9BU19 519 aaPredicted RBP22.02■■□□□ 1.12
APOC4-201ENST00000591600 ROCK2O75116 1388 aaKnown RBP22.01■■□□□ 1.11
APOC4-201ENST00000591600 TRIM37O94972 964 aa22.01■■□□□ 1.11
APOC4-201ENST00000591600 CAMKK2Q96RR4 588 aa22.01■■□□□ 1.11
APOC4-201ENST00000591600 CRB1P82279 1406 aa22■■□□□ 1.11
APOC4-201ENST00000591600 PSDA5PKW4 1024 aaPredicted RBP22■■□□□ 1.11
APOC4-201ENST00000591600 RREB1Q92766 1687 aa21.99■■□□□ 1.11
APOC4-201ENST00000591600 C11orf95C9JLR9 678 aaPredicted RBP21.98■■□□□ 1.11
APOC4-201ENST00000591600 NEUROD1Q13562 356 aa21.98■■□□□ 1.11
APOC4-201ENST00000591600 EZH2Q15910 746 aaKnown RBP21.98■■□□□ 1.11
APOC4-201ENST00000591600 RGPD5Q99666 1765 aa21.97■■□□□ 1.11
APOC4-201ENST00000591600 CPSF1Q10570 1443 aaKnown RBP21.97■■□□□ 1.11
APOC4-201ENST00000591600 SBF2Q86WG5 1849 aa21.96■■□□□ 1.11
APOC4-201ENST00000591600 WNK3Q9BYP7 1800 aa21.96■■□□□ 1.11
APOC4-201ENST00000591600 APBA3O96018 575 aa21.96■■□□□ 1.11
APOC4-201ENST00000591600 SBNO2Q9Y2G9 1366 aa21.96■■□□□ 1.11
APOC4-201ENST00000591600 PEAK1Q9H792 1746 aa21.95■■□□□ 1.1
APOC4-201ENST00000591600 TTC21BQ7Z4L5 1316 aa21.95■■□□□ 1.1
APOC4-201ENST00000591600 TTC21AQ8NDW8 1320 aa21.95■■□□□ 1.1
APOC4-201ENST00000591600 MON2Q7Z3U7 1717 aa21.94■■□□□ 1.1
APOC4-201ENST00000591600 R3HDM1Q15032 1099 aaKnown RBP21.94■■□□□ 1.1
APOC4-201ENST00000591600 KCNH5Q8NCM2 988 aa21.94■■□□□ 1.1
APOC4-201ENST00000591600 NUP188Q5SRE5 1749 aa21.94■■□□□ 1.1
APOC4-201ENST00000591600 LRRC37A3O60309 1634 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms