RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 ANTXR1Q9H6X2 564 aa18.33■□□□□ 0.52
PRKCSH-212ENST00000591462 ANKLE2Q86XL3 938 aa18.32■□□□□ 0.52
PRKCSH-212ENST00000591462 ARHGAP23Q9P227 1491 aa18.32■□□□□ 0.52
PRKCSH-212ENST00000591462 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
PRKCSH-212ENST00000591462 PDZRN3Q9UPQ7 1066 aa18.31■□□□□ 0.52
PRKCSH-212ENST00000591462 SLIT1O75093 1534 aa18.31■□□□□ 0.52
PRKCSH-212ENST00000591462 BECN1Q14457 450 aa18.31■□□□□ 0.52
PRKCSH-212ENST00000591462 RIMS2Q9UQ26 1411 aa18.3■□□□□ 0.52
PRKCSH-212ENST00000591462 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
PRKCSH-212ENST00000591462 TBC1D32Q96NH3 1257 aa18.3■□□□□ 0.52
PRKCSH-212ENST00000591462 WDR63Q8IWG1 891 aa18.29■□□□□ 0.52
PRKCSH-212ENST00000591462 SETBP1Q9Y6X0 1596 aa18.29■□□□□ 0.52
PRKCSH-212ENST00000591462 TRAK1Q9UPV9 953 aa18.29■□□□□ 0.52
PRKCSH-212ENST00000591462 MTHFSP49914 203 aa18.27■□□□□ 0.52
PRKCSH-212ENST00000591462 EID1Q9Y6B2 187 aa18.27■□□□□ 0.52
PRKCSH-212ENST00000591462 AAMPQ13685 434 aa18.27■□□□□ 0.52
PRKCSH-212ENST00000591462 TBC1D2Q9BYX2 928 aa18.27■□□□□ 0.52
PRKCSH-212ENST00000591462 QRICH2Q9H0J4 1663 aa18.27■□□□□ 0.51
PRKCSH-212ENST00000591462 NEXMIFQ5QGS0 1516 aa18.26■□□□□ 0.51
PRKCSH-212ENST00000591462 CCDC27Q2M243 656 aa18.26■□□□□ 0.51
PRKCSH-212ENST00000591462 SLC26A8Q96RN1 970 aa18.26■□□□□ 0.51
PRKCSH-212ENST00000591462 ADGRB1O14514 1584 aa18.25■□□□□ 0.51
PRKCSH-212ENST00000591462 USP32Q8NFA0 1604 aa18.25■□□□□ 0.51
PRKCSH-212ENST00000591462 NPHP4O75161 1426 aaPredicted RBP18.25■□□□□ 0.51
PRKCSH-212ENST00000591462 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
PRKCSH-212ENST00000591462 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
PRKCSH-212ENST00000591462 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
PRKCSH-212ENST00000591462 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-212ENST00000591462 RWDD1Q9H446 243 aaPredicted RBP18.22■□□□□ 0.51
PRKCSH-212ENST00000591462 UPF2Q9HAU5 1272 aaKnown RBP18.22■□□□□ 0.51
PRKCSH-212ENST00000591462 MED14O60244 1454 aa18.21■□□□□ 0.51
PRKCSH-212ENST00000591462 ADGRB2O60241 1585 aa18.21■□□□□ 0.51
PRKCSH-212ENST00000591462 PPLO60437 1756 aa18.21■□□□□ 0.51
PRKCSH-212ENST00000591462 ZNF335Q9H4Z2 1342 aaPredicted RBP18.2■□□□□ 0.5
PRKCSH-212ENST00000591462 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
PRKCSH-212ENST00000591462 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
PRKCSH-212ENST00000591462 TSR2Q969E8 191 aaKnown RBP18.18■□□□□ 0.5
PRKCSH-212ENST00000591462 CFAP53Q96M91 514 aa18.18■□□□□ 0.5
PRKCSH-212ENST00000591462 PLEKHG1Q9ULL1 1385 aa18.18■□□□□ 0.5
PRKCSH-212ENST00000591462 U2AF1L5P0DN76 240 aaPredicted RBP18.18■□□□□ 0.5
PRKCSH-212ENST00000591462 U2AF1Q01081 240 aaKnown RBP eCLIP18.18■□□□□ 0.5
PRKCSH-212ENST00000591462 ZKSCAN2Q63HK3 967 aa18.18■□□□□ 0.5
PRKCSH-212ENST00000591462 SPRYD3Q8NCJ5 442 aa18.18■□□□□ 0.5
PRKCSH-212ENST00000591462 HDGFP51858 240 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-212ENST00000591462 DZIP1LQ8IYY4 767 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-212ENST00000591462 TULP4Q9NRJ4 1543 aa18.17■□□□□ 0.5
PRKCSH-212ENST00000591462 NCBP3Q53F19 620 aaKnown RBP18.17■□□□□ 0.5
PRKCSH-212ENST00000591462 ADAMTS13Q76LX8 1427 aa18.16■□□□□ 0.5
PRKCSH-212ENST00000591462 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
PRKCSH-212ENST00000591462 RPGRIP1LQ68CZ1 1315 aa18.16■□□□□ 0.5
PRKCSH-212ENST00000591462 VGFO15240 615 aaPredicted RBP18.15■□□□□ 0.5
PRKCSH-212ENST00000591462 TRIM27P14373 513 aa18.15■□□□□ 0.5
PRKCSH-212ENST00000591462 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-212ENST00000591462 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
PRKCSH-212ENST00000591462 EXOSC9Q06265 439 aaKnown RBP18.14■□□□□ 0.49
PRKCSH-212ENST00000591462 C22orf23Q9BZE7 217 aa18.14■□□□□ 0.49
PRKCSH-212ENST00000591462 RRAGDQ9NQL2 400 aaPredicted RBP18.14■□□□□ 0.49
PRKCSH-212ENST00000591462 MFAP1P55081 439 aaKnown RBP18.13■□□□□ 0.49
PRKCSH-212ENST00000591462 SSH1Q8WYL5 1049 aa18.13■□□□□ 0.49
PRKCSH-212ENST00000591462 PLEKHF1Q96S99 279 aa18.13■□□□□ 0.49
PRKCSH-212ENST00000591462 SMC4Q9NTJ3 1288 aa18.13■□□□□ 0.49
PRKCSH-212ENST00000591462 NSD2O96028 1365 aa18.12■□□□□ 0.49
PRKCSH-212ENST00000591462 MCM4P33991 863 aa18.12■□□□□ 0.49
PRKCSH-212ENST00000591462 L1TD1Q5T7N2 865 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-212ENST00000591462 RBM33Q96EV2 1170 aaKnown RBP18.12■□□□□ 0.49
PRKCSH-212ENST00000591462 TRIM35Q9UPQ4 493 aa18.12■□□□□ 0.49
PRKCSH-212ENST00000591462 METP08581 1390 aa18.11■□□□□ 0.49
PRKCSH-212ENST00000591462 HDAC1Q13547 482 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-212ENST00000591462 ARHGEF28Q8N1W1 1705 aaKnown RBP18.11■□□□□ 0.49
PRKCSH-212ENST00000591462 CT47B1P0C2W7 299 aaPredicted RBP18.11■□□□□ 0.49
PRKCSH-212ENST00000591462 CABP2Q9NPB3 220 aa18.11■□□□□ 0.49
PRKCSH-212ENST00000591462 FSD2A1L4K1 749 aa18.1■□□□□ 0.49
PRKCSH-212ENST00000591462 XRCC6P12956 609 aaKnown RBP eCLIP18.1■□□□□ 0.49
PRKCSH-212ENST00000591462 STRCP1A6NGW2 1772 aa18.1■□□□□ 0.49
PRKCSH-212ENST00000591462 EVC2Q86UK5 1308 aa18.1■□□□□ 0.49
PRKCSH-212ENST00000591462 ARXQ96QS3 562 aa18.1■□□□□ 0.49
PRKCSH-212ENST00000591462 COL3A1P02461 1466 aaPredicted RBP18.09■□□□□ 0.49
PRKCSH-212ENST00000591462 EIF5BO60841 1220 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-212ENST00000591462 TMPOP42166 694 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-212ENST00000591462 ITPRIPQ8IWB1 547 aa18.09■□□□□ 0.49
PRKCSH-212ENST00000591462 ATF7IPQ6VMQ6 1270 aa18.08■□□□□ 0.49
PRKCSH-212ENST00000591462 SMC5Q8IY18 1101 aa18.08■□□□□ 0.49
PRKCSH-212ENST00000591462 PUS7Q96PZ0 661 aaKnown RBP18.08■□□□□ 0.49
PRKCSH-212ENST00000591462 GZF1Q9H116 711 aaPredicted RBP18.08■□□□□ 0.48
PRKCSH-212ENST00000591462 TBX22Q9Y458 520 aa18.08■□□□□ 0.48
PRKCSH-212ENST00000591462 ALKQ9UM73 1620 aa18.08■□□□□ 0.48
PRKCSH-212ENST00000591462 PTPRUQ92729 1446 aa18.08■□□□□ 0.48
PRKCSH-212ENST00000591462 ZNF692Q9BU19 519 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-212ENST00000591462 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
PRKCSH-212ENST00000591462 CHMP5Q9NZZ3 219 aa18.07■□□□□ 0.48
PRKCSH-212ENST00000591462 NOB1Q9ULX3 412 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-212ENST00000591462 DDX19BQ9UMR2 479 aa18.07■□□□□ 0.48
PRKCSH-212ENST00000591462 A0A1W2PP64 1363 aa18.07■□□□□ 0.48
PRKCSH-212ENST00000591462 U2SURPO15042 1029 aaKnown RBP18.07■□□□□ 0.48
PRKCSH-212ENST00000591462 TMEM57Q8N5G2 664 aa18.07■□□□□ 0.48
PRKCSH-212ENST00000591462 PANK2Q9BZ23 570 aa18.06■□□□□ 0.48
PRKCSH-212ENST00000591462 LTBP4Q8N2S1 1624 aa18.06■□□□□ 0.48
PRKCSH-212ENST00000591462 ABCC11Q96J66 1382 aa18.06■□□□□ 0.48
PRKCSH-212ENST00000591462 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
PRKCSH-212ENST00000591462 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms