RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 ZNF692Q9BU19 519 aaPredicted RBP26.6■■□□□ 1.85
GCDH-214ENST00000591043 RBM19Q9Y4C8 960 aaKnown RBP26.6■■□□□ 1.85
GCDH-214ENST00000591043 EXOC6Q8TAG9 804 aa26.59■■□□□ 1.85
GCDH-214ENST00000591043 NUDT16Q96DE0 195 aaKnown RBP26.59■■□□□ 1.85
GCDH-214ENST00000591043 U2AF1L5P0DN76 240 aaPredicted RBP26.58■■□□□ 1.85
GCDH-214ENST00000591043 U2AF1Q01081 240 aaKnown RBP eCLIP26.58■■□□□ 1.85
GCDH-214ENST00000591043 TBX22Q9Y458 520 aa26.58■■□□□ 1.85
GCDH-214ENST00000591043 TOPAZ1Q8N9V7 1692 aa26.58■■□□□ 1.85
GCDH-214ENST00000591043 LTKP29376 864 aa26.58■■□□□ 1.85
GCDH-214ENST00000591043 ROBO2Q9HCK4 1378 aa26.57■■□□□ 1.84
GCDH-214ENST00000591043 CEBPAP49715 358 aaPredicted RBP26.56■■□□□ 1.84
GCDH-214ENST00000591043 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
GCDH-214ENST00000591043 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.55■■□□□ 1.84
GCDH-214ENST00000591043 MAP2P11137 1827 aaKnown RBP26.55■■□□□ 1.84
GCDH-214ENST00000591043 AATKQ6ZMQ8 1374 aa26.54■■□□□ 1.84
GCDH-214ENST00000591043 DIAPH1O60610 1272 aaKnown RBP26.53■■□□□ 1.84
GCDH-214ENST00000591043 FBXO41Q8TF61 875 aa26.53■■□□□ 1.84
GCDH-214ENST00000591043 CEP170BQ9Y4F5 1589 aaPredicted RBP26.51■■□□□ 1.83
GCDH-214ENST00000591043 PIK3R4Q99570 1358 aa26.5■■□□□ 1.83
GCDH-214ENST00000591043 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
GCDH-214ENST00000591043 MYH16Q9H6N6 1097 aa26.5■■□□□ 1.83
GCDH-214ENST00000591043 SPINK5Q9NQ38 1064 aaPredicted RBP26.5■■□□□ 1.83
GCDH-214ENST00000591043 CDK12Q9NYV4 1490 aaPredicted RBP26.49■■□□□ 1.83
GCDH-214ENST00000591043 MAPK8IP3Q9UPT6 1336 aa26.49■■□□□ 1.83
GCDH-214ENST00000591043 RIMS1Q86UR5 1692 aaKnown RBP26.49■■□□□ 1.83
GCDH-214ENST00000591043 PLIN1O60240 522 aa26.48■■□□□ 1.83
GCDH-214ENST00000591043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.48■■□□□ 1.83
GCDH-214ENST00000591043 CRBNQ96SW2 442 aa26.48■■□□□ 1.83
GCDH-214ENST00000591043 XRN1Q8IZH2 1706 aaKnown RBP26.48■■□□□ 1.83
GCDH-214ENST00000591043 NRKQ7Z2Y5 1582 aa26.48■■□□□ 1.83
GCDH-214ENST00000591043 PLEKHF1Q96S99 279 aa26.48■■□□□ 1.83
GCDH-214ENST00000591043 ZNF142P52746 1687 aaPredicted RBP26.47■■□□□ 1.83
GCDH-214ENST00000591043 PTPRUQ92729 1446 aa26.47■■□□□ 1.83
GCDH-214ENST00000591043 U2SURPO15042 1029 aaKnown RBP26.47■■□□□ 1.83
GCDH-214ENST00000591043 LMTK3Q96Q04 1460 aa26.47■■□□□ 1.83
GCDH-214ENST00000591043 PLEKHG3A1L390 1219 aa26.46■■□□□ 1.83
GCDH-214ENST00000591043 FCHSD2O94868 740 aa26.46■■□□□ 1.83
GCDH-214ENST00000591043 CT47B1P0C2W7 299 aaPredicted RBP26.46■■□□□ 1.83
GCDH-214ENST00000591043 COG3Q96JB2 828 aa26.46■■□□□ 1.83
GCDH-214ENST00000591043 POLKQ9UBT6 870 aa26.45■■□□□ 1.82
GCDH-214ENST00000591043 IL16Q14005 1332 aa26.45■■□□□ 1.82
GCDH-214ENST00000591043 NEFMP07197 916 aa26.43■■□□□ 1.82
GCDH-214ENST00000591043 NEUROD2Q15784 382 aa26.43■■□□□ 1.82
GCDH-214ENST00000591043 DMRT2Q9Y5R5 561 aa26.43■■□□□ 1.82
GCDH-214ENST00000591043 PRR36Q9H6K5 1346 aa26.43■■□□□ 1.82
GCDH-214ENST00000591043 HSPA2P54652 639 aa26.43■■□□□ 1.82
GCDH-214ENST00000591043 PDE3AQ14432 1141 aa26.43■■□□□ 1.82
GCDH-214ENST00000591043 AMOTL2Q9Y2J4 779 aa26.43■■□□□ 1.82
GCDH-214ENST00000591043 RRP7AQ9Y3A4 280 aaKnown RBP26.43■■□□□ 1.82
GCDH-214ENST00000591043 FANCIQ9NVI1 1328 aa26.42■■□□□ 1.82
GCDH-214ENST00000591043 TMPOP42166 694 aaKnown RBP26.41■■□□□ 1.82
GCDH-214ENST00000591043 SLC26A8Q96RN1 970 aa26.41■■□□□ 1.82
GCDH-214ENST00000591043 SETD1BQ9UPS6 1966 aaKnown RBP26.39■■□□□ 1.82
GCDH-214ENST00000591043 TCERG1O14776 1098 aaKnown RBP26.39■■□□□ 1.82
GCDH-214ENST00000591043 AAMPQ13685 434 aa26.39■■□□□ 1.82
GCDH-214ENST00000591043 ANP32EQ9BTT0 268 aa26.39■■□□□ 1.82
GCDH-214ENST00000591043 NME9Q86XW9 330 aa26.38■■□□□ 1.81
GCDH-214ENST00000591043 LRRC7Q96NW7 1537 aa26.38■■□□□ 1.81
GCDH-214ENST00000591043 NALCNQ8IZF0 1738 aa26.38■■□□□ 1.81
GCDH-214ENST00000591043 USP6P35125 1406 aa26.38■■□□□ 1.81
GCDH-214ENST00000591043 ANKARQ7Z5J8 1434 aa26.37■■□□□ 1.81
GCDH-214ENST00000591043 C20orf194Q5TEA3 1177 aa26.36■■□□□ 1.81
GCDH-214ENST00000591043 ACEP12821 1306 aa26.35■■□□□ 1.81
GCDH-214ENST00000591043 TTC21BQ7Z4L5 1316 aa26.35■■□□□ 1.81
GCDH-214ENST00000591043 TTC21AQ8NDW8 1320 aa26.35■■□□□ 1.81
GCDH-214ENST00000591043 MS4A1P11836 297 aa26.34■■□□□ 1.81
GCDH-214ENST00000591043 CENPQQ7L2Z9 268 aaPredicted RBP26.34■■□□□ 1.81
GCDH-214ENST00000591043 OVOS2A0A0J9YW53 1432 aa26.33■■□□□ 1.81
GCDH-214ENST00000591043 OVOS2Q6IE36 1432 aa26.33■■□□□ 1.81
GCDH-214ENST00000591043 BCAR3O75815 825 aa26.33■■□□□ 1.8
GCDH-214ENST00000591043 RARSP54136 660 aaKnown RBP26.33■■□□□ 1.8
GCDH-214ENST00000591043 RSPH6AQ9H0K4 717 aa26.33■■□□□ 1.8
GCDH-214ENST00000591043 CALD1Q05682 793 aaKnown RBP26.32■■□□□ 1.8
GCDH-214ENST00000591043 CANXP27824 592 aaKnown RBP26.31■■□□□ 1.8
GCDH-214ENST00000591043 TRIM35Q9UPQ4 493 aa26.31■■□□□ 1.8
GCDH-214ENST00000591043 CHD2O14647 1828 aaKnown RBP26.31■■□□□ 1.8
GCDH-214ENST00000591043 SSH2Q76I76 1423 aa26.31■■□□□ 1.8
GCDH-214ENST00000591043 PPM1GO15355 546 aaPredicted RBP26.3■■□□□ 1.8
GCDH-214ENST00000591043 IL13P35225 146 aa26.3■■□□□ 1.8
GCDH-214ENST00000591043 FMN2Q9NZ56 1722 aa26.3■■□□□ 1.8
GCDH-214ENST00000591043 NCKAP5LQ9HCH0 1330 aa26.3■■□□□ 1.8
GCDH-214ENST00000591043 RIPK4P57078 832 aa26.3■■□□□ 1.8
GCDH-214ENST00000591043 ANKLE2Q86XL3 938 aa26.29■■□□□ 1.8
GCDH-214ENST00000591043 KDM2BQ8NHM5 1336 aa26.29■■□□□ 1.8
GCDH-214ENST00000591043 USP31Q70CQ4 1352 aa26.28■■□□□ 1.8
GCDH-214ENST00000591043 EMILIN1Q9Y6C2 1016 aa26.28■■□□□ 1.8
GCDH-214ENST00000591043 PRKAR2BP31323 418 aa26.27■■□□□ 1.8
GCDH-214ENST00000591043 RGPD8O14715 1765 aaPredicted RBP26.26■■□□□ 1.79
GCDH-214ENST00000591043 LMOD3Q0VAK6 560 aa26.25■■□□□ 1.79
GCDH-214ENST00000591043 NFE2L2Q16236 605 aa26.25■■□□□ 1.79
GCDH-214ENST00000591043 ZRANB1Q9UGI0 708 aa26.24■■□□□ 1.79
GCDH-214ENST00000591043 USP54Q70EL1 1684 aa26.24■■□□□ 1.79
GCDH-214ENST00000591043 ZNF428Q96B54 188 aa26.23■■□□□ 1.79
GCDH-214ENST00000591043 KCNA6P17658 529 aa26.19■■□□□ 1.78
GCDH-214ENST00000591043 NGDNQ8NEJ9 315 aaKnown RBP26.19■■□□□ 1.78
GCDH-214ENST00000591043 DLG5Q8TDM6 1919 aa26.19■■□□□ 1.78
GCDH-214ENST00000591043 FBLN1P23142 703 aa26.18■■□□□ 1.78
GCDH-214ENST00000591043 RRS1Q15050 365 aaKnown RBP26.18■■□□□ 1.78
GCDH-214ENST00000591043 RGPD1P0DJD0 1748 aa26.17■■□□□ 1.78
GCDH-214ENST00000591043 ZKSCAN2Q63HK3 967 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms