RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
PTBP1-216ENST00000590887 DCCP43146 1447 aa17.37■□□□□ 0.37
PTBP1-216ENST00000590887 CADPS2Q86UW7 1296 aa17.36■□□□□ 0.37
PTBP1-216ENST00000590887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.37
PTBP1-216ENST00000590887 PHF8Q9UPP1 1060 aa17.36■□□□□ 0.37
PTBP1-216ENST00000590887 HNRNPUQ00839 825 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTBP1-216ENST00000590887 GGNBP2Q9H3C7 697 aa17.35■□□□□ 0.37
PTBP1-216ENST00000590887 RGPD8O14715 1765 aaPredicted RBP17.34■□□□□ 0.37
PTBP1-216ENST00000590887 USP6P35125 1406 aa17.34■□□□□ 0.37
PTBP1-216ENST00000590887 MSH6P52701 1360 aa17.34■□□□□ 0.37
PTBP1-216ENST00000590887 TTC21BQ7Z4L5 1316 aa17.34■□□□□ 0.37
PTBP1-216ENST00000590887 TMEM94Q12767 1356 aa17.33■□□□□ 0.36
PTBP1-216ENST00000590887 PMFBP1Q8TBY8 1022 aa17.33■□□□□ 0.36
PTBP1-216ENST00000590887 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
PTBP1-216ENST00000590887 NUDCQ9Y266 331 aa17.32■□□□□ 0.36
PTBP1-216ENST00000590887 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
PTBP1-216ENST00000590887 PSME1Q06323 249 aa17.31■□□□□ 0.36
PTBP1-216ENST00000590887 LRRC7Q96NW7 1537 aa17.31■□□□□ 0.36
PTBP1-216ENST00000590887 MTHFSP49914 203 aa17.3■□□□□ 0.36
PTBP1-216ENST00000590887 KIF1AQ12756 1690 aa17.29■□□□□ 0.36
PTBP1-216ENST00000590887 AATKQ6ZMQ8 1374 aa17.29■□□□□ 0.36
PTBP1-216ENST00000590887 XIRP1Q702N8 1843 aaKnown RBP17.29■□□□□ 0.36
PTBP1-216ENST00000590887 UBAP1LF5GYI3 381 aa17.29■□□□□ 0.36
PTBP1-216ENST00000590887 RBM33Q96EV2 1170 aaKnown RBP17.29■□□□□ 0.36
PTBP1-216ENST00000590887 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
PTBP1-216ENST00000590887 NME9Q86XW9 330 aa17.28■□□□□ 0.36
PTBP1-216ENST00000590887 NGEFQ8N5V2 710 aa17.28■□□□□ 0.36
PTBP1-216ENST00000590887 NRKQ7Z2Y5 1582 aa17.28■□□□□ 0.36
PTBP1-216ENST00000590887 ZBED9Q6R2W3 1325 aa17.27■□□□□ 0.36
PTBP1-216ENST00000590887 TOM1O60784 492 aa17.26■□□□□ 0.35
PTBP1-216ENST00000590887 SSH2Q76I76 1423 aa17.26■□□□□ 0.35
PTBP1-216ENST00000590887 USP31Q70CQ4 1352 aa17.26■□□□□ 0.35
PTBP1-216ENST00000590887 C1orf167Q5SNV9 1468 aa17.25■□□□□ 0.35
PTBP1-216ENST00000590887 PAK3O75914 559 aaPredicted RBP17.24■□□□□ 0.35
PTBP1-216ENST00000590887 ABTB2Q8N961 1025 aa17.24■□□□□ 0.35
PTBP1-216ENST00000590887 MAP2P11137 1827 aaKnown RBP17.24■□□□□ 0.35
PTBP1-216ENST00000590887 DIAPH1O60610 1272 aaKnown RBP17.23■□□□□ 0.35
PTBP1-216ENST00000590887 ADAMTS8Q9UP79 889 aa17.23■□□□□ 0.35
PTBP1-216ENST00000590887 NEFMP07197 916 aa17.22■□□□□ 0.35
PTBP1-216ENST00000590887 NLRP6P59044 892 aa17.22■□□□□ 0.35
PTBP1-216ENST00000590887 MST1RQ04912 1400 aa17.21■□□□□ 0.35
PTBP1-216ENST00000590887 PDE3BQ13370 1112 aa17.21■□□□□ 0.35
PTBP1-216ENST00000590887 KCNH5Q8NCM2 988 aa17.21■□□□□ 0.35
PTBP1-216ENST00000590887 OVOS2A0A0J9YW53 1432 aa17.21■□□□□ 0.34
PTBP1-216ENST00000590887 BLMP54132 1417 aaPredicted RBP17.21■□□□□ 0.34
PTBP1-216ENST00000590887 OVOS2Q6IE36 1432 aa17.21■□□□□ 0.34
PTBP1-216ENST00000590887 NPHP3Q7Z494 1330 aa17.21■□□□□ 0.34
PTBP1-216ENST00000590887 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
PTBP1-216ENST00000590887 PNPLA6Q8IY17 1366 aa17.19■□□□□ 0.34
PTBP1-216ENST00000590887 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
PTBP1-216ENST00000590887 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
PTBP1-216ENST00000590887 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
PTBP1-216ENST00000590887 KIF24Q5T7B8 1368 aa17.18■□□□□ 0.34
PTBP1-216ENST00000590887 USP54Q70EL1 1684 aa17.18■□□□□ 0.34
PTBP1-216ENST00000590887 FOXO3O43524 673 aa17.18■□□□□ 0.34
PTBP1-216ENST00000590887 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
PTBP1-216ENST00000590887 U2AF1L5P0DN76 240 aaPredicted RBP17.17■□□□□ 0.34
PTBP1-216ENST00000590887 U2AF1Q01081 240 aaKnown RBP eCLIP17.17■□□□□ 0.34
PTBP1-216ENST00000590887 RUNDC1Q96C34 613 aa17.17■□□□□ 0.34
PTBP1-216ENST00000590887 CDK12Q9NYV4 1490 aaPredicted RBP17.17■□□□□ 0.34
PTBP1-216ENST00000590887 NCBP3Q53F19 620 aaKnown RBP17.16■□□□□ 0.34
PTBP1-216ENST00000590887 SLAIN2Q9P270 581 aa17.16■□□□□ 0.34
PTBP1-216ENST00000590887 ZRANB1Q9UGI0 708 aa17.16■□□□□ 0.34
PTBP1-216ENST00000590887 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
PTBP1-216ENST00000590887 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
PTBP1-216ENST00000590887 PIK3C2AO00443 1686 aa17.15■□□□□ 0.34
PTBP1-216ENST00000590887 AMPHP49418 695 aa17.14■□□□□ 0.33
PTBP1-216ENST00000590887 SHPRHQ149N8 1683 aa17.13■□□□□ 0.33
PTBP1-216ENST00000590887 FCHSD2O94868 740 aa17.13■□□□□ 0.33
PTBP1-216ENST00000590887 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
PTBP1-216ENST00000590887 MAPK8IP3Q9UPT6 1336 aa17.13■□□□□ 0.33
PTBP1-216ENST00000590887 LMOD2Q6P5Q4 547 aa17.12■□□□□ 0.33
PTBP1-216ENST00000590887 EMILIN1Q9Y6C2 1016 aa17.12■□□□□ 0.33
PTBP1-216ENST00000590887 FLT4P35916 1363 aa17.12■□□□□ 0.33
PTBP1-216ENST00000590887 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
PTBP1-216ENST00000590887 ARHGEF10O15013 1369 aa17.11■□□□□ 0.33
PTBP1-216ENST00000590887 COL3A1P02461 1466 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-216ENST00000590887 HSPA1LP34931 641 aa17.1■□□□□ 0.33
PTBP1-216ENST00000590887 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
PTBP1-216ENST00000590887 IL13P35225 146 aa17.09■□□□□ 0.33
PTBP1-216ENST00000590887 TRPM3Q9HCF6 1732 aaPredicted RBP17.09■□□□□ 0.33
PTBP1-216ENST00000590887 APAF1O14727 1248 aa17.08■□□□□ 0.32
PTBP1-216ENST00000590887 SOX12O15370 315 aa17.08■□□□□ 0.32
PTBP1-216ENST00000590887 NUTM2GQ5VZR2 741 aa17.08■□□□□ 0.32
PTBP1-216ENST00000590887 BRINP3Q76B58 766 aa17.08■□□□□ 0.32
PTBP1-216ENST00000590887 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
PTBP1-216ENST00000590887 MAP3K19Q56UN5 1328 aa17.07■□□□□ 0.32
PTBP1-216ENST00000590887 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
PTBP1-216ENST00000590887 TNS3Q68CZ2 1445 aa17.05■□□□□ 0.32
PTBP1-216ENST00000590887 GCP02774 474 aa17.05■□□□□ 0.32
PTBP1-216ENST00000590887 FBLN1P23142 703 aa17.05■□□□□ 0.32
PTBP1-216ENST00000590887 XPCQ01831 940 aaPredicted RBP17.05■□□□□ 0.32
PTBP1-216ENST00000590887 CCDC27Q2M243 656 aa17.05■□□□□ 0.32
PTBP1-216ENST00000590887 TCP11L2Q8N4U5 519 aa17.05■□□□□ 0.32
PTBP1-216ENST00000590887 USP19O94966 1318 aa17.04■□□□□ 0.32
PTBP1-216ENST00000590887 SPATA31A3Q5VYP0 1347 aa17.04■□□□□ 0.32
PTBP1-216ENST00000590887 NEFLP07196 543 aa17.04■□□□□ 0.32
PTBP1-216ENST00000590887 GOLGA2Q08379 1002 aa17.04■□□□□ 0.32
PTBP1-216ENST00000590887 IP6K1Q92551 441 aa17.04■□□□□ 0.32
PTBP1-216ENST00000590887 SLIT3O75094 1523 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms