RNA–Protein interactions for RNA: ENST00000590315.5

DDX39A-213, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-213ENST00000590315 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
DDX39A-213ENST00000590315 PIK3C2AO00443 1686 aa17.79■□□□□ 0.44
DDX39A-213ENST00000590315 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
DDX39A-213ENST00000590315 LRRC59Q96AG4 307 aaKnown RBP17.78■□□□□ 0.44
DDX39A-213ENST00000590315 ANKRD36BQ8N2N9 1353 aa17.78■□□□□ 0.44
DDX39A-213ENST00000590315 COL22A1Q8NFW1 1626 aaPredicted RBP17.77■□□□□ 0.44
DDX39A-213ENST00000590315 PHRF1Q9P1Y6 1649 aaKnown RBP17.77■□□□□ 0.44
DDX39A-213ENST00000590315 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
DDX39A-213ENST00000590315 MARF1Q9Y4F3 1742 aaKnown RBP17.77■□□□□ 0.44
DDX39A-213ENST00000590315 SBNO1A3KN83 1393 aa17.77■□□□□ 0.43
DDX39A-213ENST00000590315 JCADQ9P266 1359 aa17.77■□□□□ 0.43
DDX39A-213ENST00000590315 CPSF1Q10570 1443 aaKnown RBP17.76■□□□□ 0.43
DDX39A-213ENST00000590315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDX39A-213ENST00000590315 WASHC2AQ641Q2 1341 aa17.75■□□□□ 0.43
DDX39A-213ENST00000590315 HAP1P54257 671 aaPredicted RBP17.75■□□□□ 0.43
DDX39A-213ENST00000590315 ARHGEF10O15013 1369 aa17.75■□□□□ 0.43
DDX39A-213ENST00000590315 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
DDX39A-213ENST00000590315 CRYBG1Q9Y4K1 1723 aa17.75■□□□□ 0.43
DDX39A-213ENST00000590315 SPATA31A3Q5VYP0 1347 aa17.74■□□□□ 0.43
DDX39A-213ENST00000590315 EDC4Q6P2E9 1401 aaKnown RBP17.74■□□□□ 0.43
DDX39A-213ENST00000590315 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
DDX39A-213ENST00000590315 PNPLA6Q8IY17 1366 aa17.74■□□□□ 0.43
DDX39A-213ENST00000590315 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
DDX39A-213ENST00000590315 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-213ENST00000590315 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-213ENST00000590315 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
DDX39A-213ENST00000590315 ABTB2Q8N961 1025 aa17.73■□□□□ 0.43
DDX39A-213ENST00000590315 TTC21BQ7Z4L5 1316 aa17.72■□□□□ 0.43
DDX39A-213ENST00000590315 BRD4O60885 1362 aaPredicted RBP17.72■□□□□ 0.43
DDX39A-213ENST00000590315 MED1Q15648 1581 aaPredicted RBP17.71■□□□□ 0.43
DDX39A-213ENST00000590315 TTC21AQ8NDW8 1320 aa17.71■□□□□ 0.42
DDX39A-213ENST00000590315 PANK3Q9H999 370 aa17.7■□□□□ 0.42
DDX39A-213ENST00000590315 USP54Q70EL1 1684 aa17.7■□□□□ 0.42
DDX39A-213ENST00000590315 LTN1O94822 1766 aa17.69■□□□□ 0.42
DDX39A-213ENST00000590315 NLRP6P59044 892 aa17.68■□□□□ 0.42
DDX39A-213ENST00000590315 MEX3CQ5U5Q3 659 aaKnown RBP17.68■□□□□ 0.42
DDX39A-213ENST00000590315 SSH2Q76I76 1423 aa17.68■□□□□ 0.42
DDX39A-213ENST00000590315 NME9Q86XW9 330 aa17.68■□□□□ 0.42
DDX39A-213ENST00000590315 ZNF316A6NFI3 1004 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-213ENST00000590315 CABLES1Q8TDN4 633 aa17.67■□□□□ 0.42
DDX39A-213ENST00000590315 SPATA31A6Q5VVP1 1343 aa17.67■□□□□ 0.42
DDX39A-213ENST00000590315 SOX12O15370 315 aa17.66■□□□□ 0.42
DDX39A-213ENST00000590315 CNGB1Q14028 1251 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-213ENST00000590315 NLRP13Q86W25 1043 aa17.66■□□□□ 0.42
DDX39A-213ENST00000590315 PLCH1Q4KWH8 1693 aa17.65■□□□□ 0.42
DDX39A-213ENST00000590315 ZBTB7CA1YPR0 619 aa17.65■□□□□ 0.42
DDX39A-213ENST00000590315 KNSTRNQ9Y448 316 aa17.65■□□□□ 0.42
DDX39A-213ENST00000590315 LRP6O75581 1613 aa17.65■□□□□ 0.42
DDX39A-213ENST00000590315 ADAMTS2O95450 1211 aa17.64■□□□□ 0.41
DDX39A-213ENST00000590315 CARD14Q9BXL6 1004 aa17.64■□□□□ 0.41
DDX39A-213ENST00000590315 ZRANB1Q9UGI0 708 aa17.64■□□□□ 0.41
DDX39A-213ENST00000590315 CGNL1Q0VF96 1302 aa17.64■□□□□ 0.41
DDX39A-213ENST00000590315 RGPD5Q99666 1765 aa17.63■□□□□ 0.41
DDX39A-213ENST00000590315 MAP2P11137 1827 aaKnown RBP17.63■□□□□ 0.41
DDX39A-213ENST00000590315 SLIT3O75094 1523 aa17.63■□□□□ 0.41
DDX39A-213ENST00000590315 COG3Q96JB2 828 aa17.63■□□□□ 0.41
DDX39A-213ENST00000590315 GGNBP2Q9H3C7 697 aa17.63■□□□□ 0.41
DDX39A-213ENST00000590315 DDX10Q13206 875 aaKnown RBP17.62■□□□□ 0.41
DDX39A-213ENST00000590315 COL14A1Q05707 1796 aaKnown RBP17.61■□□□□ 0.41
DDX39A-213ENST00000590315 OVOS2A0A0J9YW53 1432 aa17.6■□□□□ 0.41
DDX39A-213ENST00000590315 OVOS2Q6IE36 1432 aa17.6■□□□□ 0.41
DDX39A-213ENST00000590315 USP31Q70CQ4 1352 aa17.59■□□□□ 0.41
DDX39A-213ENST00000590315 USP19O94966 1318 aa17.59■□□□□ 0.41
DDX39A-213ENST00000590315 C8orf37Q96NL8 207 aa17.59■□□□□ 0.41
DDX39A-213ENST00000590315 NWD2Q9ULI1 1742 aa17.58■□□□□ 0.41
DDX39A-213ENST00000590315 FYB1O15117 783 aa17.58■□□□□ 0.4
DDX39A-213ENST00000590315 ZC3H6P61129 1189 aaKnown RBP17.58■□□□□ 0.4
DDX39A-213ENST00000590315 NFAT5O94916 1531 aa17.57■□□□□ 0.4
DDX39A-213ENST00000590315 CC2D1BQ5T0F9 858 aaKnown RBP17.57■□□□□ 0.4
DDX39A-213ENST00000590315 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
DDX39A-213ENST00000590315 NSD2O96028 1365 aa17.56■□□□□ 0.4
DDX39A-213ENST00000590315 GCP02774 474 aa17.56■□□□□ 0.4
DDX39A-213ENST00000590315 KCNH5Q8NCM2 988 aa17.56■□□□□ 0.4
DDX39A-213ENST00000590315 PRDM11Q9NQV5 511 aa17.56■□□□□ 0.4
DDX39A-213ENST00000590315 KIAA0232Q92628 1395 aa17.55■□□□□ 0.4
DDX39A-213ENST00000590315 TNNT2P45379 298 aaPredicted RBP17.55■□□□□ 0.4
DDX39A-213ENST00000590315 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
DDX39A-213ENST00000590315 NGLY1Q96IV0 654 aa17.54■□□□□ 0.4
DDX39A-213ENST00000590315 NRAPQ86VF7 1730 aa17.54■□□□□ 0.4
DDX39A-213ENST00000590315 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.54■□□□□ 0.4
DDX39A-213ENST00000590315 CHRNA2Q15822 529 aa17.53■□□□□ 0.4
DDX39A-213ENST00000590315 COL18A1P39060 1754 aa17.52■□□□□ 0.4
DDX39A-213ENST00000590315 LMO7Q8WWI1 1683 aa17.52■□□□□ 0.39
DDX39A-213ENST00000590315 AFF2P51816 1311 aa17.5■□□□□ 0.39
DDX39A-213ENST00000590315 PEAK1Q9H792 1746 aa17.5■□□□□ 0.39
DDX39A-213ENST00000590315 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-213ENST00000590315 AMER1Q5JTC6 1135 aaPredicted RBP17.5■□□□□ 0.39
DDX39A-213ENST00000590315 RGPD2P0DJD1 1756 aa17.49■□□□□ 0.39
DDX39A-213ENST00000590315 PPM1GO15355 546 aaPredicted RBP17.49■□□□□ 0.39
DDX39A-213ENST00000590315 FBLN1P23142 703 aa17.49■□□□□ 0.39
DDX39A-213ENST00000590315 RRS1Q15050 365 aaKnown RBP17.49■□□□□ 0.39
DDX39A-213ENST00000590315 CPDO75976 1380 aa17.49■□□□□ 0.39
DDX39A-213ENST00000590315 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
DDX39A-213ENST00000590315 AMPHP49418 695 aa17.48■□□□□ 0.39
DDX39A-213ENST00000590315 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
DDX39A-213ENST00000590315 STRN4Q9NRL3 753 aa17.47■□□□□ 0.39
DDX39A-213ENST00000590315 BTG4Q9NY30 223 aa17.47■□□□□ 0.39
DDX39A-213ENST00000590315 USP21Q9UK80 565 aa17.47■□□□□ 0.39
DDX39A-213ENST00000590315 ABCC6O95255 1503 aa17.47■□□□□ 0.39
DDX39A-213ENST00000590315 NPC1L1Q9UHC9 1359 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms