RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 TTC21BQ7Z4L5 1316 aa25.75■■□□□ 1.71
POLR2E-207ENST00000590060 PMFBP1Q8TBY8 1022 aa25.75■■□□□ 1.71
POLR2E-207ENST00000590060 RBM33Q96EV2 1170 aaKnown RBP25.75■■□□□ 1.71
POLR2E-207ENST00000590060 MSH6P52701 1360 aa25.74■■□□□ 1.71
POLR2E-207ENST00000590060 ATF3P18847 181 aa25.74■■□□□ 1.71
POLR2E-207ENST00000590060 PHF8Q9UPP1 1060 aa25.74■■□□□ 1.71
POLR2E-207ENST00000590060 STRCP1A6NGW2 1772 aa25.73■■□□□ 1.71
POLR2E-207ENST00000590060 RGPD8O14715 1765 aaPredicted RBP25.73■■□□□ 1.71
POLR2E-207ENST00000590060 KIF1AQ12756 1690 aa25.71■■□□□ 1.71
POLR2E-207ENST00000590060 ZBED9Q6R2W3 1325 aa25.71■■□□□ 1.71
POLR2E-207ENST00000590060 NME9Q86XW9 330 aa25.71■■□□□ 1.71
POLR2E-207ENST00000590060 BLMP54132 1417 aaPredicted RBP25.7■■□□□ 1.7
POLR2E-207ENST00000590060 MTHFSP49914 203 aa25.69■■□□□ 1.7
POLR2E-207ENST00000590060 ESCO1Q5FWF5 840 aa25.69■■□□□ 1.7
POLR2E-207ENST00000590060 CADPS2Q86UW7 1296 aa25.69■■□□□ 1.7
POLR2E-207ENST00000590060 SSH2Q76I76 1423 aa25.69■■□□□ 1.7
POLR2E-207ENST00000590060 AATKQ6ZMQ8 1374 aa25.68■■□□□ 1.7
POLR2E-207ENST00000590060 OVOS2A0A0J9YW53 1432 aa25.66■■□□□ 1.7
POLR2E-207ENST00000590060 OVOS2Q6IE36 1432 aa25.66■■□□□ 1.7
POLR2E-207ENST00000590060 C1orf167Q5SNV9 1468 aa25.66■■□□□ 1.7
POLR2E-207ENST00000590060 LRRC7Q96NW7 1537 aa25.64■■□□□ 1.7
POLR2E-207ENST00000590060 NUDCQ9Y266 331 aa25.64■■□□□ 1.7
POLR2E-207ENST00000590060 ZNF335Q9H4Z2 1342 aaPredicted RBP25.63■■□□□ 1.69
POLR2E-207ENST00000590060 MST1RQ04912 1400 aa25.63■■□□□ 1.69
POLR2E-207ENST00000590060 SMG6Q86US8 1419 aaKnown RBP25.63■■□□□ 1.69
POLR2E-207ENST00000590060 USP31Q70CQ4 1352 aa25.62■■□□□ 1.69
POLR2E-207ENST00000590060 PSME1Q06323 249 aa25.61■■□□□ 1.69
POLR2E-207ENST00000590060 CDK12Q9NYV4 1490 aaPredicted RBP25.6■■□□□ 1.69
POLR2E-207ENST00000590060 ADAMTS8Q9UP79 889 aa25.6■■□□□ 1.69
POLR2E-207ENST00000590060 PIK3C2AO00443 1686 aa25.58■■□□□ 1.69
POLR2E-207ENST00000590060 SHPRHQ149N8 1683 aa25.58■■□□□ 1.69
POLR2E-207ENST00000590060 USP54Q70EL1 1684 aa25.58■■□□□ 1.69
POLR2E-207ENST00000590060 PAK3O75914 559 aaPredicted RBP25.58■■□□□ 1.69
POLR2E-207ENST00000590060 COL3A1P02461 1466 aaPredicted RBP25.56■■□□□ 1.68
POLR2E-207ENST00000590060 ZRANB1Q9UGI0 708 aa25.56■■□□□ 1.68
POLR2E-207ENST00000590060 PNPLA6Q8IY17 1366 aa25.56■■□□□ 1.68
POLR2E-207ENST00000590060 ORAI2Q96SN7 254 aa25.55■■□□□ 1.68
POLR2E-207ENST00000590060 POLKQ9UBT6 870 aa25.55■■□□□ 1.68
POLR2E-207ENST00000590060 XIRP1Q702N8 1843 aaKnown RBP25.54■■□□□ 1.68
POLR2E-207ENST00000590060 PPM1GO15355 546 aaPredicted RBP25.54■■□□□ 1.68
POLR2E-207ENST00000590060 DIAPH1O60610 1272 aaKnown RBP25.54■■□□□ 1.68
POLR2E-207ENST00000590060 NLRP6P59044 892 aa25.54■■□□□ 1.68
POLR2E-207ENST00000590060 ABTB2Q8N961 1025 aa25.54■■□□□ 1.68
POLR2E-207ENST00000590060 NGEFQ8N5V2 710 aa25.53■■□□□ 1.68
POLR2E-207ENST00000590060 PNNQ9H307 717 aaKnown RBP25.52■■□□□ 1.68
POLR2E-207ENST00000590060 NPHP3Q7Z494 1330 aa25.51■■□□□ 1.67
POLR2E-207ENST00000590060 FOXO3O43524 673 aa25.5■■□□□ 1.67
POLR2E-207ENST00000590060 U2AF1L5P0DN76 240 aaPredicted RBP25.5■■□□□ 1.67
POLR2E-207ENST00000590060 MAP2P11137 1827 aaKnown RBP25.5■■□□□ 1.67
POLR2E-207ENST00000590060 U2AF1Q01081 240 aaKnown RBP eCLIP25.5■■□□□ 1.67
POLR2E-207ENST00000590060 U2SURPO15042 1029 aaKnown RBP25.49■■□□□ 1.67
POLR2E-207ENST00000590060 EMILIN1Q9Y6C2 1016 aa25.49■■□□□ 1.67
POLR2E-207ENST00000590060 PDE3BQ13370 1112 aa25.48■■□□□ 1.67
POLR2E-207ENST00000590060 KRT28Q7Z3Y7 464 aa25.48■■□□□ 1.67
POLR2E-207ENST00000590060 KIF24Q5T7B8 1368 aa25.47■■□□□ 1.67
POLR2E-207ENST00000590060 RRS1Q15050 365 aaKnown RBP25.47■■□□□ 1.67
POLR2E-207ENST00000590060 RUNDC1Q96C34 613 aa25.47■■□□□ 1.67
POLR2E-207ENST00000590060 TRPM3Q9HCF6 1732 aaPredicted RBP25.46■■□□□ 1.67
POLR2E-207ENST00000590060 NEFMP07197 916 aa25.45■■□□□ 1.66
POLR2E-207ENST00000590060 CCDC146Q8IYE0 955 aa25.45■■□□□ 1.66
POLR2E-207ENST00000590060 KCNH5Q8NCM2 988 aa25.45■■□□□ 1.66
POLR2E-207ENST00000590060 SBNO1A3KN83 1393 aa25.44■■□□□ 1.66
POLR2E-207ENST00000590060 FLT4P35916 1363 aa25.44■■□□□ 1.66
POLR2E-207ENST00000590060 SOX12O15370 315 aa25.44■■□□□ 1.66
POLR2E-207ENST00000590060 MAPK8IP3Q9UPT6 1336 aa25.43■■□□□ 1.66
POLR2E-207ENST00000590060 RTL1A6NKG5 1358 aa25.43■■□□□ 1.66
POLR2E-207ENST00000590060 AMPHP49418 695 aa25.42■■□□□ 1.66
POLR2E-207ENST00000590060 MARF1Q9Y4F3 1742 aaKnown RBP25.41■■□□□ 1.66
POLR2E-207ENST00000590060 NUTM2GQ5VZR2 741 aa25.41■■□□□ 1.66
POLR2E-207ENST00000590060 MAP3K19Q56UN5 1328 aa25.4■■□□□ 1.66
POLR2E-207ENST00000590060 FBLN1P23142 703 aa25.4■■□□□ 1.66
POLR2E-207ENST00000590060 XPCQ01831 940 aaPredicted RBP25.4■■□□□ 1.66
POLR2E-207ENST00000590060 LMOD2Q6P5Q4 547 aa25.4■■□□□ 1.66
POLR2E-207ENST00000590060 SLAIN2Q9P270 581 aa25.4■■□□□ 1.66
POLR2E-207ENST00000590060 SALL2Q9Y467 1007 aaPredicted RBP25.4■■□□□ 1.66
POLR2E-207ENST00000590060 SLIT3O75094 1523 aa25.39■■□□□ 1.66
POLR2E-207ENST00000590060 IQSEC2Q5JU85 1478 aa25.39■■□□□ 1.65
POLR2E-207ENST00000590060 TNS3Q68CZ2 1445 aa25.38■■□□□ 1.65
POLR2E-207ENST00000590060 APAF1O14727 1248 aa25.38■■□□□ 1.65
POLR2E-207ENST00000590060 ARHGEF10O15013 1369 aa25.38■■□□□ 1.65
POLR2E-207ENST00000590060 FCHSD2O94868 740 aa25.37■■□□□ 1.65
POLR2E-207ENST00000590060 IL13P35225 146 aa25.37■■□□□ 1.65
POLR2E-207ENST00000590060 NCBP3Q53F19 620 aaKnown RBP25.37■■□□□ 1.65
POLR2E-207ENST00000590060 BRINP3Q76B58 766 aa25.37■■□□□ 1.65
POLR2E-207ENST00000590060 ALS2Q96Q42 1657 aa25.36■■□□□ 1.65
POLR2E-207ENST00000590060 PEAK1Q9H792 1746 aa25.36■■□□□ 1.65
POLR2E-207ENST00000590060 NFAT5O94916 1531 aa25.36■■□□□ 1.65
POLR2E-207ENST00000590060 USP19O94966 1318 aa25.36■■□□□ 1.65
POLR2E-207ENST00000590060 PXDNQ92626 1479 aa25.35■■□□□ 1.65
POLR2E-207ENST00000590060 LTBP4Q8N2S1 1624 aa25.34■■□□□ 1.65
POLR2E-207ENST00000590060 SENP3-EIF4A1A0A087X0R7 540 aa25.34■■□□□ 1.65
POLR2E-207ENST00000590060 AEBP2Q6ZN18 517 aaPredicted RBP25.34■■□□□ 1.65
POLR2E-207ENST00000590060 NEFLP07196 543 aa25.32■■□□□ 1.64
POLR2E-207ENST00000590060 EIF4A2Q14240 407 aaKnown RBP25.32■■□□□ 1.64
POLR2E-207ENST00000590060 TCP11L2Q8N4U5 519 aa25.32■■□□□ 1.64
POLR2E-207ENST00000590060 PHRF1Q9P1Y6 1649 aaKnown RBP25.3■■□□□ 1.64
POLR2E-207ENST00000590060 GOLGA2Q08379 1002 aa25.3■■□□□ 1.64
POLR2E-207ENST00000590060 LTN1O94822 1766 aa25.29■■□□□ 1.64
POLR2E-207ENST00000590060 HOXC9P31274 260 aa25.29■■□□□ 1.64
POLR2E-207ENST00000590060 HSP90AB2PQ58FF8 381 aa25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms