RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 BTG4Q9NY30 223 aa20.47■□□□□ 0.87
SF3A2-205ENST00000590034 ATP7BP35670 1465 aa20.47■□□□□ 0.87
SF3A2-205ENST00000590034 FAM98CQ17RN3 349 aaKnown RBP20.44■□□□□ 0.86
SF3A2-205ENST00000590034 PHRF1Q9P1Y6 1649 aaKnown RBP20.43■□□□□ 0.86
SF3A2-205ENST00000590034 TOPAZ1Q8N9V7 1692 aa20.43■□□□□ 0.86
SF3A2-205ENST00000590034 THSD7AQ9UPZ6 1657 aa20.43■□□□□ 0.86
SF3A2-205ENST00000590034 SF3B2Q13435 895 aaKnown RBP20.42■□□□□ 0.86
SF3A2-205ENST00000590034 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
SF3A2-205ENST00000590034 A0A0G2JS52 829 aa20.41■□□□□ 0.86
SF3A2-205ENST00000590034 MYT1Q01538 1121 aa20.41■□□□□ 0.86
SF3A2-205ENST00000590034 SPATA31A5Q5VU36 1347 aa20.4■□□□□ 0.86
SF3A2-205ENST00000590034 SPATA31A7Q8IWB4 1347 aa20.4■□□□□ 0.86
SF3A2-205ENST00000590034 STAC3Q96MF2 364 aa20.4■□□□□ 0.86
SF3A2-205ENST00000590034 RGPD1P0DJD0 1748 aa20.39■□□□□ 0.86
SF3A2-205ENST00000590034 LRP5O75197 1615 aa20.39■□□□□ 0.86
SF3A2-205ENST00000590034 PAK3O75914 559 aaPredicted RBP20.39■□□□□ 0.85
SF3A2-205ENST00000590034 FAM182BQ5T319 152 aa20.38■□□□□ 0.85
SF3A2-205ENST00000590034 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
SF3A2-205ENST00000590034 TNS1Q9HBL0 1735 aaKnown RBP20.38■□□□□ 0.85
SF3A2-205ENST00000590034 KIAA1210Q9ULL0 1709 aa20.38■□□□□ 0.85
SF3A2-205ENST00000590034 PRDM11Q9NQV5 511 aa20.37■□□□□ 0.85
SF3A2-205ENST00000590034 KIAA0232Q92628 1395 aa20.36■□□□□ 0.85
SF3A2-205ENST00000590034 HRCP23327 699 aa20.36■□□□□ 0.85
SF3A2-205ENST00000590034 POLR3AO14802 1390 aaPredicted RBP20.34■□□□□ 0.85
SF3A2-205ENST00000590034 BAG6P46379 1132 aa20.34■□□□□ 0.85
SF3A2-205ENST00000590034 CHRNA2Q15822 529 aa20.34■□□□□ 0.85
SF3A2-205ENST00000590034 CDK19Q9BWU1 502 aa20.34■□□□□ 0.85
SF3A2-205ENST00000590034 NRKQ7Z2Y5 1582 aa20.34■□□□□ 0.85
SF3A2-205ENST00000590034 SPATA31A1Q5TZJ5 1347 aa20.32■□□□□ 0.84
SF3A2-205ENST00000590034 PSDA5PKW4 1024 aaPredicted RBP20.32■□□□□ 0.84
SF3A2-205ENST00000590034 NUTM2GQ5VZR2 741 aa20.32■□□□□ 0.84
SF3A2-205ENST00000590034 EN1Q05925 392 aaPredicted RBP20.31■□□□□ 0.84
SF3A2-205ENST00000590034 ACEP12821 1306 aa20.3■□□□□ 0.84
SF3A2-205ENST00000590034 DISP2A7MBM2 1401 aa20.3■□□□□ 0.84
SF3A2-205ENST00000590034 LMO7Q8WWI1 1683 aa20.3■□□□□ 0.84
SF3A2-205ENST00000590034 ZC3H6P61129 1189 aaKnown RBP20.3■□□□□ 0.84
SF3A2-205ENST00000590034 NBPF1Q3BBV0 1214 aa20.29■□□□□ 0.84
SF3A2-205ENST00000590034 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
SF3A2-205ENST00000590034 STRN4Q9NRL3 753 aa20.29■□□□□ 0.84
SF3A2-205ENST00000590034 CCDC61Q9Y6R9 512 aa20.29■□□□□ 0.84
SF3A2-205ENST00000590034 PLEKHG3A1L390 1219 aa20.28■□□□□ 0.84
SF3A2-205ENST00000590034 CAMTA1Q9Y6Y1 1673 aa20.28■□□□□ 0.84
SF3A2-205ENST00000590034 SSH2Q76I76 1423 aa20.27■□□□□ 0.84
SF3A2-205ENST00000590034 QRICH2Q9H0J4 1663 aa20.25■□□□□ 0.83
SF3A2-205ENST00000590034 USP19O94966 1318 aa20.25■□□□□ 0.83
SF3A2-205ENST00000590034 USP35Q9P2H5 1018 aa20.24■□□□□ 0.83
SF3A2-205ENST00000590034 PPIP5K1Q6PFW1 1433 aa20.24■□□□□ 0.83
SF3A2-205ENST00000590034 CPDO75976 1380 aa20.23■□□□□ 0.83
SF3A2-205ENST00000590034 EZH2Q15910 746 aaKnown RBP20.23■□□□□ 0.83
SF3A2-205ENST00000590034 ABTB2Q8N961 1025 aa20.23■□□□□ 0.83
SF3A2-205ENST00000590034 TRIM37O94972 964 aa20.22■□□□□ 0.83
SF3A2-205ENST00000590034 LARP1Q6PKG0 1096 aaKnown RBP20.22■□□□□ 0.83
SF3A2-205ENST00000590034 R3HDM1Q15032 1099 aaKnown RBP20.21■□□□□ 0.83
SF3A2-205ENST00000590034 FAM196AQ6ZSG2 479 aa20.21■□□□□ 0.83
SF3A2-205ENST00000590034 BARGINQ6ZT62 677 aa20.21■□□□□ 0.83
SF3A2-205ENST00000590034 CAMKK2Q96RR4 588 aa20.21■□□□□ 0.83
SF3A2-205ENST00000590034 RREB1Q92766 1687 aa20.21■□□□□ 0.83
SF3A2-205ENST00000590034 CABP2Q9NPB3 220 aa20.2■□□□□ 0.82
SF3A2-205ENST00000590034 CENPJQ9HC77 1338 aaPredicted RBP20.2■□□□□ 0.82
SF3A2-205ENST00000590034 NUP188Q5SRE5 1749 aa20.19■□□□□ 0.82
SF3A2-205ENST00000590034 COL5A2P05997 1499 aaPredicted RBP20.19■□□□□ 0.82
SF3A2-205ENST00000590034 SRPK2P78362 688 aaKnown RBP20.19■□□□□ 0.82
SF3A2-205ENST00000590034 PARP4Q9UKK3 1724 aaKnown RBP20.19■□□□□ 0.82
SF3A2-205ENST00000590034 EVA1CP58658 441 aa20.18■□□□□ 0.82
SF3A2-205ENST00000590034 GCP02774 474 aa20.17■□□□□ 0.82
SF3A2-205ENST00000590034 SLIT3O75094 1523 aa20.17■□□□□ 0.82
SF3A2-205ENST00000590034 PIK3C2AO00443 1686 aa20.16■□□□□ 0.82
SF3A2-205ENST00000590034 TCP11L2Q8N4U5 519 aa20.16■□□□□ 0.82
SF3A2-205ENST00000590034 USP6P35125 1406 aa20.16■□□□□ 0.82
SF3A2-205ENST00000590034 APBA3O96018 575 aa20.15■□□□□ 0.82
SF3A2-205ENST00000590034 NLRP13Q86W25 1043 aa20.15■□□□□ 0.82
SF3A2-205ENST00000590034 PARD3Q8TEW0 1356 aa20.15■□□□□ 0.82
SF3A2-205ENST00000590034 COL18A1P39060 1754 aa20.14■□□□□ 0.81
SF3A2-205ENST00000590034 PEAK1Q9H792 1746 aa20.14■□□□□ 0.81
SF3A2-205ENST00000590034 TRPM1Q7Z4N2 1603 aa20.14■□□□□ 0.81
SF3A2-205ENST00000590034 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
SF3A2-205ENST00000590034 BRD4O60885 1362 aaPredicted RBP20.13■□□□□ 0.81
SF3A2-205ENST00000590034 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
SF3A2-205ENST00000590034 LRRC37A3O60309 1634 aa20.13■□□□□ 0.81
SF3A2-205ENST00000590034 CRB1P82279 1406 aa20.11■□□□□ 0.81
SF3A2-205ENST00000590034 WNK3Q9BYP7 1800 aa20.11■□□□□ 0.81
SF3A2-205ENST00000590034 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
SF3A2-205ENST00000590034 THRAP3Q9Y2W1 955 aaKnown RBP20.11■□□□□ 0.81
SF3A2-205ENST00000590034 SBF2Q86WG5 1849 aa20.11■□□□□ 0.81
SF3A2-205ENST00000590034 AKAP12Q02952 1782 aa20.1■□□□□ 0.81
SF3A2-205ENST00000590034 AATKQ6ZMQ8 1374 aa20.09■□□□□ 0.81
SF3A2-205ENST00000590034 NLRP6P59044 892 aa20.09■□□□□ 0.81
SF3A2-205ENST00000590034 RGPD5Q99666 1765 aa20.08■□□□□ 0.81
SF3A2-205ENST00000590034 ZBTB7CA1YPR0 619 aa20.08■□□□□ 0.81
SF3A2-205ENST00000590034 RGPD3A6NKT7 1758 aaPredicted RBP20.06■□□□□ 0.8
SF3A2-205ENST00000590034 RGPD4Q7Z3J3 1758 aa20.06■□□□□ 0.8
SF3A2-205ENST00000590034 OVOS2A0A0G2JMS6 1433 aa20.06■□□□□ 0.8
SF3A2-205ENST00000590034 OVOS2A0A0J9YW53 1432 aa20.06■□□□□ 0.8
SF3A2-205ENST00000590034 OVOS2Q6IE36 1432 aa20.06■□□□□ 0.8
SF3A2-205ENST00000590034 CPSF1Q10570 1443 aaKnown RBP20.05■□□□□ 0.8
SF3A2-205ENST00000590034 SIN3AQ96ST3 1273 aa20.05■□□□□ 0.8
SF3A2-205ENST00000590034 AXIN2Q9Y2T1 843 aa20.05■□□□□ 0.8
SF3A2-205ENST00000590034 EVC2Q86UK5 1308 aa20.04■□□□□ 0.8
SF3A2-205ENST00000590034 NFAT5O94916 1531 aa20.02■□□□□ 0.79
SF3A2-205ENST00000590034 TTC21BQ7Z4L5 1316 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms