RNA–Protein interactions for RNA: ENST00000589969.1

NFIC-209, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-209ENST00000589969 POLR3AO14802 1390 aaPredicted RBP29.73■■■□□ 2.35
NFIC-209ENST00000589969 PLCH1Q4KWH8 1693 aa29.72■■■□□ 2.35
NFIC-209ENST00000589969 ONECUT3O60422 494 aaPredicted RBP29.72■■■□□ 2.35
NFIC-209ENST00000589969 ACEP12821 1306 aa29.71■■■□□ 2.35
NFIC-209ENST00000589969 NBPF8Q3BBV2 869 aa29.7■■■□□ 2.35
NFIC-209ENST00000589969 SEPT12Q8IYM1 358 aa29.7■■■□□ 2.35
NFIC-209ENST00000589969 BTG4Q9NY30 223 aa29.7■■■□□ 2.35
NFIC-209ENST00000589969 EP400Q96L91 3159 aa29.7■■■□□ 2.34
NFIC-209ENST00000589969 SIN3AQ96ST3 1273 aa29.69■■■□□ 2.34
NFIC-209ENST00000589969 SRPK2P78362 688 aaKnown RBP29.68■■■□□ 2.34
NFIC-209ENST00000589969 COL14A1Q05707 1796 aaKnown RBP29.67■■■□□ 2.34
NFIC-209ENST00000589969 PRDM11Q9NQV5 511 aa29.66■■■□□ 2.34
NFIC-209ENST00000589969 TOPAZ1Q8N9V7 1692 aa29.66■■■□□ 2.34
NFIC-209ENST00000589969 NEUROD1Q13562 356 aa29.65■■■□□ 2.34
NFIC-209ENST00000589969 KRT27Q7Z3Y8 459 aa29.61■■■□□ 2.33
NFIC-209ENST00000589969 CABP2Q9NPB3 220 aa29.61■■■□□ 2.33
NFIC-209ENST00000589969 CRYBG1Q9Y4K1 1723 aa29.61■■■□□ 2.33
NFIC-209ENST00000589969 PPIP5K1Q6PFW1 1433 aa29.61■■■□□ 2.33
NFIC-209ENST00000589969 NRAPQ86VF7 1730 aa29.6■■■□□ 2.33
NFIC-209ENST00000589969 BRD4O60885 1362 aaPredicted RBP29.6■■■□□ 2.33
NFIC-209ENST00000589969 BLMP54132 1417 aaPredicted RBP29.6■■■□□ 2.33
NFIC-209ENST00000589969 ABTB2Q8N961 1025 aa29.59■■■□□ 2.33
NFIC-209ENST00000589969 KIAA0232Q92628 1395 aa29.59■■■□□ 2.33
NFIC-209ENST00000589969 A0A0G2JS52 829 aa29.58■■■□□ 2.33
NFIC-209ENST00000589969 ROCK2O75116 1388 aaKnown RBP29.58■■■□□ 2.33
NFIC-209ENST00000589969 MYT1Q01538 1121 aa29.58■■■□□ 2.33
NFIC-209ENST00000589969 SPATA31A5Q5VU36 1347 aa29.57■■■□□ 2.32
NFIC-209ENST00000589969 SPATA31A7Q8IWB4 1347 aa29.57■■■□□ 2.32
NFIC-209ENST00000589969 FAM98CQ17RN3 349 aaKnown RBP29.57■■■□□ 2.32
NFIC-209ENST00000589969 NUTM2GQ5VZR2 741 aa29.57■■■□□ 2.32
NFIC-209ENST00000589969 QRICH2Q9H0J4 1663 aa29.56■■■□□ 2.32
NFIC-209ENST00000589969 EVC2Q86UK5 1308 aa29.56■■■□□ 2.32
NFIC-209ENST00000589969 TRPM1Q7Z4N2 1603 aa29.56■■■□□ 2.32
NFIC-209ENST00000589969 SF3B2Q13435 895 aaKnown RBP29.55■■■□□ 2.32
NFIC-209ENST00000589969 BRWD3Q6RI45 1802 aa29.55■■■□□ 2.32
NFIC-209ENST00000589969 ZC3H6P61129 1189 aaKnown RBP29.54■■■□□ 2.32
NFIC-209ENST00000589969 NLRP13Q86W25 1043 aa29.54■■■□□ 2.32
NFIC-209ENST00000589969 ZRANB1Q9UGI0 708 aa29.54■■■□□ 2.32
NFIC-209ENST00000589969 CABP1Q9NZU7 370 aa29.53■■■□□ 2.32
NFIC-209ENST00000589969 PHRF1Q9P1Y6 1649 aaKnown RBP29.53■■■□□ 2.32
NFIC-209ENST00000589969 CHRNA2Q15822 529 aa29.52■■■□□ 2.32
NFIC-209ENST00000589969 USP19O94966 1318 aa29.51■■■□□ 2.32
NFIC-209ENST00000589969 CPDO75976 1380 aa29.5■■■□□ 2.31
NFIC-209ENST00000589969 SPATA31A1Q5TZJ5 1347 aa29.47■■■□□ 2.31
NFIC-209ENST00000589969 USP6P35125 1406 aa29.47■■■□□ 2.31
NFIC-209ENST00000589969 STRN4Q9NRL3 753 aa29.47■■■□□ 2.31
NFIC-209ENST00000589969 GCP02774 474 aa29.46■■■□□ 2.31
NFIC-209ENST00000589969 EVA1CP58658 441 aa29.46■■■□□ 2.31
NFIC-209ENST00000589969 NRKQ7Z2Y5 1582 aa29.45■■■□□ 2.31
NFIC-209ENST00000589969 ZNF692Q9BU19 519 aaPredicted RBP29.44■■■□□ 2.3
NFIC-209ENST00000589969 NLRP6P59044 892 aa29.42■■■□□ 2.3
NFIC-209ENST00000589969 TONSLQ96HA7 1378 aa29.41■■■□□ 2.3
NFIC-209ENST00000589969 SSH2Q76I76 1423 aa29.41■■■□□ 2.3
NFIC-209ENST00000589969 DEFB132Q7Z7B7 95 aa29.41■■■□□ 2.3
NFIC-209ENST00000589969 THSD7AQ9UPZ6 1657 aa29.4■■■□□ 2.3
NFIC-209ENST00000589969 SBNO2Q9Y2G9 1366 aa29.39■■■□□ 2.3
NFIC-209ENST00000589969 BARGINQ6ZT62 677 aa29.39■■■□□ 2.3
NFIC-209ENST00000589969 CARD11Q9BXL7 1154 aa29.39■■■□□ 2.3
NFIC-209ENST00000589969 CAMTA1Q9Y6Y1 1673 aa29.38■■■□□ 2.29
NFIC-209ENST00000589969 BAG6P46379 1132 aa29.38■■■□□ 2.29
NFIC-209ENST00000589969 TRIM26Q12899 539 aaPredicted RBP29.36■■■□□ 2.29
NFIC-209ENST00000589969 USP35Q9P2H5 1018 aa29.36■■■□□ 2.29
NFIC-209ENST00000589969 SRCAPQ6ZRS2 3230 aa29.35■■■□□ 2.29
NFIC-209ENST00000589969 LARP1Q6PKG0 1096 aaKnown RBP29.35■■■□□ 2.29
NFIC-209ENST00000589969 LMO7Q8WWI1 1683 aa29.34■■■□□ 2.29
NFIC-209ENST00000589969 TCP11L2Q8N4U5 519 aa29.34■■■□□ 2.29
NFIC-209ENST00000589969 THRAP3Q9Y2W1 955 aaKnown RBP29.34■■■□□ 2.29
NFIC-209ENST00000589969 TTC21BQ7Z4L5 1316 aa29.33■■■□□ 2.29
NFIC-209ENST00000589969 TTC21AQ8NDW8 1320 aa29.33■■■□□ 2.29
NFIC-209ENST00000589969 AATKQ6ZMQ8 1374 aa29.33■■■□□ 2.29
NFIC-209ENST00000589969 SLIT3O75094 1523 aa29.33■■■□□ 2.29
NFIC-209ENST00000589969 FAM182BQ5T319 152 aa29.32■■■□□ 2.28
NFIC-209ENST00000589969 FAM196AQ6ZSG2 479 aa29.32■■■□□ 2.28
NFIC-209ENST00000589969 CPSF1Q10570 1443 aaKnown RBP29.31■■■□□ 2.28
NFIC-209ENST00000589969 COL5A2P05997 1499 aaPredicted RBP29.3■■■□□ 2.28
NFIC-209ENST00000589969 KCNH5Q8NCM2 988 aa29.3■■■□□ 2.28
NFIC-209ENST00000589969 PDE3BQ13370 1112 aa29.29■■■□□ 2.28
NFIC-209ENST00000589969 KTN1Q86UP2 1357 aaKnown RBP29.28■■■□□ 2.28
NFIC-209ENST00000589969 ZBTB7CA1YPR0 619 aa29.28■■■□□ 2.28
NFIC-209ENST00000589969 PIK3C2AO00443 1686 aa29.28■■■□□ 2.28
NFIC-209ENST00000589969 RGPD1P0DJD0 1748 aa29.26■■■□□ 2.27
NFIC-209ENST00000589969 CRB1P82279 1406 aa29.26■■■□□ 2.27
NFIC-209ENST00000589969 AKAP12Q02952 1782 aa29.25■■■□□ 2.27
NFIC-209ENST00000589969 DISP2A7MBM2 1401 aa29.25■■■□□ 2.27
NFIC-209ENST00000589969 PUS7Q96PZ0 661 aaKnown RBP29.24■■■□□ 2.27
NFIC-209ENST00000589969 EN1Q05925 392 aaPredicted RBP29.23■■■□□ 2.27
NFIC-209ENST00000589969 ARHGEF25Q86VW2 580 aa29.23■■■□□ 2.27
NFIC-209ENST00000589969 C11orf95C9JLR9 678 aaPredicted RBP29.21■■■□□ 2.27
NFIC-209ENST00000589969 SLC24A1O60721 1099 aa29.21■■■□□ 2.27
NFIC-209ENST00000589969 TRIM37O94972 964 aa29.21■■■□□ 2.27
NFIC-209ENST00000589969 HDGFL2Q7Z4V5 671 aaPredicted RBP29.2■■■□□ 2.26
NFIC-209ENST00000589969 TMC1Q8TDI8 760 aa29.2■■■□□ 2.26
NFIC-209ENST00000589969 TOM1L2Q6ZVM7 507 aa29.19■■■□□ 2.26
NFIC-209ENST00000589969 AXIN2Q9Y2T1 843 aa29.18■■■□□ 2.26
NFIC-209ENST00000589969 WDR17Q8IZU2 1322 aa29.18■■■□□ 2.26
NFIC-209ENST00000589969 TERF2IPQ9NYB0 399 aa29.17■■■□□ 2.26
NFIC-209ENST00000589969 USP31Q70CQ4 1352 aa29.16■■■□□ 2.26
NFIC-209ENST00000589969 PARD3Q8TEW0 1356 aa29.16■■■□□ 2.26
NFIC-209ENST00000589969 SOX12O15370 315 aa29.16■■■□□ 2.26
NFIC-209ENST00000589969 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms