RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
TPM4-211ENST00000589897 ADGRB1O14514 1584 aa11.97□□□□□ -0.49
TPM4-211ENST00000589897 PLEKHG5O94827 1062 aa11.97□□□□□ -0.49
TPM4-211ENST00000589897 TRIM37O94972 964 aa11.97□□□□□ -0.49
TPM4-211ENST00000589897 PMFBP1Q8TBY8 1022 aa11.97□□□□□ -0.49
TPM4-211ENST00000589897 NINLQ9Y2I6 1382 aa11.96□□□□□ -0.49
TPM4-211ENST00000589897 C1QTNF8P60827 252 aa11.96□□□□□ -0.49
TPM4-211ENST00000589897 FAM182BQ5T319 152 aa11.96□□□□□ -0.49
TPM4-211ENST00000589897 BTG4Q9NY30 223 aa11.96□□□□□ -0.49
TPM4-211ENST00000589897 ANKARQ7Z5J8 1434 aa11.95□□□□□ -0.5
TPM4-211ENST00000589897 ARHGEF10O15013 1369 aa11.95□□□□□ -0.5
TPM4-211ENST00000589897 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.95□□□□□ -0.5
TPM4-211ENST00000589897 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
TPM4-211ENST00000589897 NEUROD1Q13562 356 aa11.95□□□□□ -0.5
TPM4-211ENST00000589897 GPRASP1Q5JY77 1395 aa11.94□□□□□ -0.5
TPM4-211ENST00000589897 ADGRB2O60241 1585 aa11.94□□□□□ -0.5
TPM4-211ENST00000589897 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
TPM4-211ENST00000589897 SPATA31A5Q5VU36 1347 aa11.93□□□□□ -0.5
TPM4-211ENST00000589897 SPATA31A7Q8IWB4 1347 aa11.93□□□□□ -0.5
TPM4-211ENST00000589897 KIAA1210Q9ULL0 1709 aa11.93□□□□□ -0.5
TPM4-211ENST00000589897 SBNO1A3KN83 1393 aa11.92□□□□□ -0.5
TPM4-211ENST00000589897 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
TPM4-211ENST00000589897 MARF1Q9Y4F3 1742 aaKnown RBP11.92□□□□□ -0.5
TPM4-211ENST00000589897 PAK3O75914 559 aaPredicted RBP11.92□□□□□ -0.5
TPM4-211ENST00000589897 TNS3Q68CZ2 1445 aa11.92□□□□□ -0.5
TPM4-211ENST00000589897 TULP4Q9NRJ4 1543 aa11.91□□□□□ -0.5
TPM4-211ENST00000589897 C11orf95C9JLR9 678 aaPredicted RBP11.91□□□□□ -0.5
TPM4-211ENST00000589897 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
TPM4-211ENST00000589897 L3MBTL2Q969R5 705 aa11.91□□□□□ -0.5
TPM4-211ENST00000589897 SIN3AQ96ST3 1273 aa11.91□□□□□ -0.5
TPM4-211ENST00000589897 USP32Q8NFA0 1604 aa11.9□□□□□ -0.5
TPM4-211ENST00000589897 NBPF1Q3BBV0 1214 aa11.9□□□□□ -0.5
TPM4-211ENST00000589897 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
TPM4-211ENST00000589897 CDK19Q9BWU1 502 aa11.9□□□□□ -0.5
TPM4-211ENST00000589897 ITSN1Q15811 1721 aa11.89□□□□□ -0.51
TPM4-211ENST00000589897 BRWD3Q6RI45 1802 aa11.89□□□□□ -0.51
TPM4-211ENST00000589897 PRR36Q9H6K5 1346 aa11.88□□□□□ -0.51
TPM4-211ENST00000589897 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
TPM4-211ENST00000589897 SRPK2P78362 688 aaKnown RBP11.88□□□□□ -0.51
TPM4-211ENST00000589897 TRIM26Q12899 539 aaPredicted RBP11.87□□□□□ -0.51
TPM4-211ENST00000589897 PRDM11Q9NQV5 511 aa11.86□□□□□ -0.51
TPM4-211ENST00000589897 CCDC61Q9Y6R9 512 aa11.86□□□□□ -0.51
TPM4-211ENST00000589897 SPATA31A1Q5TZJ5 1347 aa11.86□□□□□ -0.51
TPM4-211ENST00000589897 ROCK2O75116 1388 aaKnown RBP11.85□□□□□ -0.51
TPM4-211ENST00000589897 EVA1CP58658 441 aa11.85□□□□□ -0.51
TPM4-211ENST00000589897 BARGINQ6ZT62 677 aa11.85□□□□□ -0.51
TPM4-211ENST00000589897 ATP7BP35670 1465 aa11.84□□□□□ -0.51
TPM4-211ENST00000589897 TRPM3Q9HCF6 1732 aaPredicted RBP11.84□□□□□ -0.51
TPM4-211ENST00000589897 ACEP12821 1306 aa11.84□□□□□ -0.51
TPM4-211ENST00000589897 NWD2Q9ULI1 1742 aa11.83□□□□□ -0.52
TPM4-211ENST00000589897 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
TPM4-211ENST00000589897 QRICH2Q9H0J4 1663 aa11.83□□□□□ -0.52
TPM4-211ENST00000589897 RGPD1P0DJD0 1748 aa11.83□□□□□ -0.52
TPM4-211ENST00000589897 ABCA3Q99758 1704 aa11.83□□□□□ -0.52
TPM4-211ENST00000589897 TONSLQ96HA7 1378 aa11.82□□□□□ -0.52
TPM4-211ENST00000589897 ALS2Q96Q42 1657 aa11.82□□□□□ -0.52
TPM4-211ENST00000589897 PLSCR1O15162 318 aa11.82□□□□□ -0.52
TPM4-211ENST00000589897 GIGYF1O75420 1035 aaPredicted RBP11.82□□□□□ -0.52
TPM4-211ENST00000589897 NUTM2GQ5VZR2 741 aa11.82□□□□□ -0.52
TPM4-211ENST00000589897 SYT17Q9BSW7 474 aa11.82□□□□□ -0.52
TPM4-211ENST00000589897 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
TPM4-211ENST00000589897 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
TPM4-211ENST00000589897 TRPM1Q7Z4N2 1603 aa11.82□□□□□ -0.52
TPM4-211ENST00000589897 PLCH1Q4KWH8 1693 aa11.81□□□□□ -0.52
TPM4-211ENST00000589897 PPIP5K1Q6PFW1 1433 aa11.81□□□□□ -0.52
TPM4-211ENST00000589897 PLEKHG3A1L390 1219 aa11.81□□□□□ -0.52
TPM4-211ENST00000589897 ABTB2Q8N961 1025 aa11.81□□□□□ -0.52
TPM4-211ENST00000589897 USP35Q9P2H5 1018 aa11.81□□□□□ -0.52
TPM4-211ENST00000589897 TCP11L2Q8N4U5 519 aa11.8□□□□□ -0.52
TPM4-211ENST00000589897 THRAP3Q9Y2W1 955 aaKnown RBP11.8□□□□□ -0.52
TPM4-211ENST00000589897 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
TPM4-211ENST00000589897 TOPAZ1Q8N9V7 1692 aa11.79□□□□□ -0.52
TPM4-211ENST00000589897 CARD11Q9BXL7 1154 aa11.79□□□□□ -0.52
TPM4-211ENST00000589897 FHDC1Q9C0D6 1143 aaPredicted RBP11.79□□□□□ -0.52
TPM4-211ENST00000589897 BCL11BQ9C0K0 894 aaPredicted RBP11.79□□□□□ -0.52
TPM4-211ENST00000589897 CABP1Q9NZU7 370 aa11.79□□□□□ -0.52
TPM4-211ENST00000589897 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
TPM4-211ENST00000589897 ZBTB7AO95365 584 aa11.78□□□□□ -0.52
TPM4-211ENST00000589897 ZC3H6P61129 1189 aaKnown RBP11.78□□□□□ -0.52
TPM4-211ENST00000589897 NLRP13Q86W25 1043 aa11.78□□□□□ -0.52
TPM4-211ENST00000589897 ATF5Q9Y2D1 282 aaPredicted RBP11.78□□□□□ -0.52
TPM4-211ENST00000589897 PTGER2P43116 358 aa11.77□□□□□ -0.53
TPM4-211ENST00000589897 CHRNA2Q15822 529 aa11.76□□□□□ -0.53
TPM4-211ENST00000589897 GPR162Q16538 588 aa11.76□□□□□ -0.53
TPM4-211ENST00000589897 BRD4O60885 1362 aaPredicted RBP11.76□□□□□ -0.53
TPM4-211ENST00000589897 KIAA0232Q92628 1395 aa11.76□□□□□ -0.53
TPM4-211ENST00000589897 ZBTB7CA1YPR0 619 aa11.75□□□□□ -0.53
TPM4-211ENST00000589897 NLRP6P59044 892 aa11.75□□□□□ -0.53
TPM4-211ENST00000589897 MTFR1LQ9H019 292 aa11.75□□□□□ -0.53
TPM4-211ENST00000589897 STK32BQ9NY57 414 aa11.75□□□□□ -0.53
TPM4-211ENST00000589897 PHRF1Q9P1Y6 1649 aaKnown RBP11.75□□□□□ -0.53
TPM4-211ENST00000589897 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
TPM4-211ENST00000589897 CRYBG1Q9Y4K1 1723 aa11.74□□□□□ -0.53
TPM4-211ENST00000589897 GCP02774 474 aa11.73□□□□□ -0.53
TPM4-211ENST00000589897 USP6P35125 1406 aa11.73□□□□□ -0.53
TPM4-211ENST00000589897 NRAPQ86VF7 1730 aa11.73□□□□□ -0.53
TPM4-211ENST00000589897 THSD7AQ9UPZ6 1657 aa11.72□□□□□ -0.53
TPM4-211ENST00000589897 LARP1Q6PKG0 1096 aaKnown RBP11.72□□□□□ -0.53
TPM4-211ENST00000589897 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
TPM4-211ENST00000589897 ARXQ96QS3 562 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms