RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 NBPF8Q3BBV2 869 aa17.62■□□□□ 0.41
VAT1-206ENST00000589709 SEPT12Q8IYM1 358 aa17.62■□□□□ 0.41
VAT1-206ENST00000589709 CENPJQ9HC77 1338 aaPredicted RBP17.62■□□□□ 0.41
VAT1-206ENST00000589709 BTG4Q9NY30 223 aa17.61■□□□□ 0.41
VAT1-206ENST00000589709 ACEP12821 1306 aa17.61■□□□□ 0.41
VAT1-206ENST00000589709 PLCH1Q4KWH8 1693 aa17.61■□□□□ 0.41
VAT1-206ENST00000589709 SIN3AQ96ST3 1273 aa17.6■□□□□ 0.41
VAT1-206ENST00000589709 CCDC9Q9Y3X0 531 aaKnown RBP17.6■□□□□ 0.41
VAT1-206ENST00000589709 COL14A1Q05707 1796 aaKnown RBP17.58■□□□□ 0.4
VAT1-206ENST00000589709 SRPK2P78362 688 aaKnown RBP17.57■□□□□ 0.4
VAT1-206ENST00000589709 PRDM11Q9NQV5 511 aa17.57■□□□□ 0.4
VAT1-206ENST00000589709 EP400Q96L91 3159 aa17.56■□□□□ 0.4
VAT1-206ENST00000589709 TOPAZ1Q8N9V7 1692 aa17.56■□□□□ 0.4
VAT1-206ENST00000589709 KRT27Q7Z3Y8 459 aa17.56■□□□□ 0.4
VAT1-206ENST00000589709 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
VAT1-206ENST00000589709 CRYBG1Q9Y4K1 1723 aa17.55■□□□□ 0.4
VAT1-206ENST00000589709 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
VAT1-206ENST00000589709 BRD4O60885 1362 aaPredicted RBP17.54■□□□□ 0.4
VAT1-206ENST00000589709 SPATA31A5Q5VU36 1347 aa17.54■□□□□ 0.4
VAT1-206ENST00000589709 SPATA31A7Q8IWB4 1347 aa17.54■□□□□ 0.4
VAT1-206ENST00000589709 NEUROD1Q13562 356 aa17.54■□□□□ 0.4
VAT1-206ENST00000589709 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
VAT1-206ENST00000589709 PPIP5K1Q6PFW1 1433 aa17.54■□□□□ 0.4
VAT1-206ENST00000589709 KIAA0232Q92628 1395 aa17.53■□□□□ 0.4
VAT1-206ENST00000589709 FAM98CQ17RN3 349 aaKnown RBP17.53■□□□□ 0.4
VAT1-206ENST00000589709 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
VAT1-206ENST00000589709 BRWD3Q6RI45 1802 aa17.52■□□□□ 0.4
VAT1-206ENST00000589709 NUTM2GQ5VZR2 741 aa17.52■□□□□ 0.4
VAT1-206ENST00000589709 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
VAT1-206ENST00000589709 USP19O94966 1318 aa17.51■□□□□ 0.39
VAT1-206ENST00000589709 ZC3H6P61129 1189 aaKnown RBP17.51■□□□□ 0.39
VAT1-206ENST00000589709 NLRP13Q86W25 1043 aa17.51■□□□□ 0.39
VAT1-206ENST00000589709 CABP1Q9NZU7 370 aa17.51■□□□□ 0.39
VAT1-206ENST00000589709 EVC2Q86UK5 1308 aa17.5■□□□□ 0.39
VAT1-206ENST00000589709 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
VAT1-206ENST00000589709 ROCK2O75116 1388 aaKnown RBP17.5■□□□□ 0.39
VAT1-206ENST00000589709 CPDO75976 1380 aa17.5■□□□□ 0.39
VAT1-206ENST00000589709 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
VAT1-206ENST00000589709 A0A0G2JS52 829 aa17.49■□□□□ 0.39
VAT1-206ENST00000589709 MYT1Q01538 1121 aa17.49■□□□□ 0.39
VAT1-206ENST00000589709 SF3B2Q13435 895 aaKnown RBP17.49■□□□□ 0.39
VAT1-206ENST00000589709 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
VAT1-206ENST00000589709 SPATA31A1Q5TZJ5 1347 aa17.48■□□□□ 0.39
VAT1-206ENST00000589709 PHRF1Q9P1Y6 1649 aaKnown RBP17.48■□□□□ 0.39
VAT1-206ENST00000589709 GCP02774 474 aa17.47■□□□□ 0.39
VAT1-206ENST00000589709 USP6P35125 1406 aa17.47■□□□□ 0.39
VAT1-206ENST00000589709 DEFB132Q7Z7B7 95 aa17.46■□□□□ 0.39
VAT1-206ENST00000589709 STRN4Q9NRL3 753 aa17.46■□□□□ 0.39
VAT1-206ENST00000589709 EVA1CP58658 441 aa17.45■□□□□ 0.38
VAT1-206ENST00000589709 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
VAT1-206ENST00000589709 SSH2Q76I76 1423 aa17.45■□□□□ 0.38
VAT1-206ENST00000589709 NRKQ7Z2Y5 1582 aa17.45■□□□□ 0.38
VAT1-206ENST00000589709 BARGINQ6ZT62 677 aa17.44■□□□□ 0.38
VAT1-206ENST00000589709 THSD7AQ9UPZ6 1657 aa17.43■□□□□ 0.38
VAT1-206ENST00000589709 CAMTA1Q9Y6Y1 1673 aa17.43■□□□□ 0.38
VAT1-206ENST00000589709 NLRP6P59044 892 aa17.43■□□□□ 0.38
VAT1-206ENST00000589709 SBNO2Q9Y2G9 1366 aa17.42■□□□□ 0.38
VAT1-206ENST00000589709 BAG6P46379 1132 aa17.42■□□□□ 0.38
VAT1-206ENST00000589709 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
VAT1-206ENST00000589709 LMO7Q8WWI1 1683 aa17.4■□□□□ 0.38
VAT1-206ENST00000589709 TCP11L2Q8N4U5 519 aa17.4■□□□□ 0.38
VAT1-206ENST00000589709 CARD11Q9BXL7 1154 aa17.4■□□□□ 0.38
VAT1-206ENST00000589709 THRAP3Q9Y2W1 955 aaKnown RBP17.4■□□□□ 0.38
VAT1-206ENST00000589709 AATKQ6ZMQ8 1374 aa17.4■□□□□ 0.38
VAT1-206ENST00000589709 FAM182BQ5T319 152 aa17.39■□□□□ 0.37
VAT1-206ENST00000589709 FAM196AQ6ZSG2 479 aa17.39■□□□□ 0.37
VAT1-206ENST00000589709 USP35Q9P2H5 1018 aa17.39■□□□□ 0.37
VAT1-206ENST00000589709 TTC21BQ7Z4L5 1316 aa17.39■□□□□ 0.37
VAT1-206ENST00000589709 TONSLQ96HA7 1378 aa17.39■□□□□ 0.37
VAT1-206ENST00000589709 CPSF1Q10570 1443 aaKnown RBP17.38■□□□□ 0.37
VAT1-206ENST00000589709 SLIT3O75094 1523 aa17.38■□□□□ 0.37
VAT1-206ENST00000589709 TTC21AQ8NDW8 1320 aa17.38■□□□□ 0.37
VAT1-206ENST00000589709 COL5A2P05997 1499 aaPredicted RBP17.37■□□□□ 0.37
VAT1-206ENST00000589709 TRIM26Q12899 539 aaPredicted RBP17.36■□□□□ 0.37
VAT1-206ENST00000589709 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
VAT1-206ENST00000589709 KCNH5Q8NCM2 988 aa17.36■□□□□ 0.37
VAT1-206ENST00000589709 DISP2A7MBM2 1401 aa17.36■□□□□ 0.37
VAT1-206ENST00000589709 SRCAPQ6ZRS2 3230 aa17.36■□□□□ 0.37
VAT1-206ENST00000589709 PIK3C2AO00443 1686 aa17.34■□□□□ 0.37
VAT1-206ENST00000589709 CRB1P82279 1406 aa17.34■□□□□ 0.37
VAT1-206ENST00000589709 EN1Q05925 392 aaPredicted RBP17.34■□□□□ 0.37
VAT1-206ENST00000589709 KTN1Q86UP2 1357 aaKnown RBP17.34■□□□□ 0.37
VAT1-206ENST00000589709 ARHGEF25Q86VW2 580 aa17.34■□□□□ 0.37
VAT1-206ENST00000589709 PUS7Q96PZ0 661 aaKnown RBP17.34■□□□□ 0.37
VAT1-206ENST00000589709 RGPD1P0DJD0 1748 aa17.33■□□□□ 0.37
VAT1-206ENST00000589709 ZBTB7CA1YPR0 619 aa17.32■□□□□ 0.36
VAT1-206ENST00000589709 C11orf95C9JLR9 678 aaPredicted RBP17.32■□□□□ 0.36
VAT1-206ENST00000589709 TRIM37O94972 964 aa17.32■□□□□ 0.36
VAT1-206ENST00000589709 AKAP12Q02952 1782 aa17.32■□□□□ 0.36
VAT1-206ENST00000589709 AXIN2Q9Y2T1 843 aa17.31■□□□□ 0.36
VAT1-206ENST00000589709 USP31Q70CQ4 1352 aa17.3■□□□□ 0.36
VAT1-206ENST00000589709 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
VAT1-206ENST00000589709 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
VAT1-206ENST00000589709 CAMKK2Q96RR4 588 aa17.3■□□□□ 0.36
VAT1-206ENST00000589709 COL18A1P39060 1754 aa17.3■□□□□ 0.36
VAT1-206ENST00000589709 PARD3Q8TEW0 1356 aa17.29■□□□□ 0.36
VAT1-206ENST00000589709 TOM1L2Q6ZVM7 507 aa17.29■□□□□ 0.36
VAT1-206ENST00000589709 APBA3O96018 575 aa17.28■□□□□ 0.36
VAT1-206ENST00000589709 EZH2Q15910 746 aaKnown RBP17.28■□□□□ 0.36
VAT1-206ENST00000589709 HDGFL2Q7Z4V5 671 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms