RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 ATAD2Q6PL18 1390 aa23.83■■□□□ 1.41
H3F3B-208ENST00000589599 TOPAZ1Q8N9V7 1692 aa23.83■■□□□ 1.4
H3F3B-208ENST00000589599 ST20-MTHFSA0A0A6YYL1 179 aa23.82■■□□□ 1.4
H3F3B-208ENST00000589599 TRPC5Q9UL62 973 aaPredicted RBP23.82■■□□□ 1.4
H3F3B-208ENST00000589599 TRPM3Q9HCF6 1732 aaPredicted RBP23.81■■□□□ 1.4
H3F3B-208ENST00000589599 RBM6P78332 1123 aaKnown RBP23.81■■□□□ 1.4
H3F3B-208ENST00000589599 ABTB2Q8N961 1025 aa23.81■■□□□ 1.4
H3F3B-208ENST00000589599 BRD4O60885 1362 aaPredicted RBP23.8■■□□□ 1.4
H3F3B-208ENST00000589599 ZNF692Q9BU19 519 aaPredicted RBP23.8■■□□□ 1.4
H3F3B-208ENST00000589599 NUTM2GQ5VZR2 741 aa23.78■■□□□ 1.4
H3F3B-208ENST00000589599 UNC5CLQ8IV45 518 aa23.77■■□□□ 1.4
H3F3B-208ENST00000589599 PUS7Q96PZ0 661 aaKnown RBP23.77■■□□□ 1.4
H3F3B-208ENST00000589599 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
H3F3B-208ENST00000589599 TESK2Q96S53 571 aa23.76■■□□□ 1.39
H3F3B-208ENST00000589599 USP47Q96K76 1375 aa23.76■■□□□ 1.39
H3F3B-208ENST00000589599 FAM83GA6ND36 823 aa23.75■■□□□ 1.39
H3F3B-208ENST00000589599 NLRP13Q86W25 1043 aa23.75■■□□□ 1.39
H3F3B-208ENST00000589599 TMC1Q8TDI8 760 aa23.75■■□□□ 1.39
H3F3B-208ENST00000589599 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
H3F3B-208ENST00000589599 USP6P35125 1406 aa23.74■■□□□ 1.39
H3F3B-208ENST00000589599 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
H3F3B-208ENST00000589599 ATRNO75882 1429 aa23.72■■□□□ 1.39
H3F3B-208ENST00000589599 SLIT2O94813 1529 aa23.72■■□□□ 1.39
H3F3B-208ENST00000589599 CDK12Q9NYV4 1490 aaPredicted RBP23.71■■□□□ 1.39
H3F3B-208ENST00000589599 TMF1P82094 1093 aa23.71■■□□□ 1.39
H3F3B-208ENST00000589599 PRDM11Q9NQV5 511 aa23.71■■□□□ 1.39
H3F3B-208ENST00000589599 NLRP6P59044 892 aa23.7■■□□□ 1.38
H3F3B-208ENST00000589599 HDGFL2Q7Z4V5 671 aaPredicted RBP23.7■■□□□ 1.38
H3F3B-208ENST00000589599 GJD4Q96KN9 370 aaPredicted RBP23.7■■□□□ 1.38
H3F3B-208ENST00000589599 KTN1Q86UP2 1357 aaKnown RBP23.69■■□□□ 1.38
H3F3B-208ENST00000589599 SLC12A5Q9H2X9 1139 aa23.69■■□□□ 1.38
H3F3B-208ENST00000589599 TERF2IPQ9NYB0 399 aa23.69■■□□□ 1.38
H3F3B-208ENST00000589599 TTC21BQ7Z4L5 1316 aa23.68■■□□□ 1.38
H3F3B-208ENST00000589599 ZC3H6P61129 1189 aaKnown RBP23.68■■□□□ 1.38
H3F3B-208ENST00000589599 BTG4Q9NY30 223 aa23.68■■□□□ 1.38
H3F3B-208ENST00000589599 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
H3F3B-208ENST00000589599 TTC21AQ8NDW8 1320 aa23.67■■□□□ 1.38
H3F3B-208ENST00000589599 VPS72Q15906 364 aa23.67■■□□□ 1.38
H3F3B-208ENST00000589599 CDCA8Q53HL2 280 aa23.67■■□□□ 1.38
H3F3B-208ENST00000589599 CCDC9Q9Y3X0 531 aaKnown RBP23.67■■□□□ 1.38
H3F3B-208ENST00000589599 ABCA3Q99758 1704 aa23.67■■□□□ 1.38
H3F3B-208ENST00000589599 SSH2Q76I76 1423 aa23.67■■□□□ 1.38
H3F3B-208ENST00000589599 USP19O94966 1318 aa23.66■■□□□ 1.38
H3F3B-208ENST00000589599 KIAA0232Q92628 1395 aa23.65■■□□□ 1.38
H3F3B-208ENST00000589599 GCP02774 474 aa23.65■■□□□ 1.38
H3F3B-208ENST00000589599 NINLQ9Y2I6 1382 aa23.64■■□□□ 1.37
H3F3B-208ENST00000589599 CHRNA2Q15822 529 aa23.63■■□□□ 1.37
H3F3B-208ENST00000589599 RGS12O14924 1447 aa23.62■■□□□ 1.37
H3F3B-208ENST00000589599 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.61■■□□□ 1.37
H3F3B-208ENST00000589599 COL14A1Q05707 1796 aaKnown RBP23.6■■□□□ 1.37
H3F3B-208ENST00000589599 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.6■■□□□ 1.37
H3F3B-208ENST00000589599 EIF4G2P78344 907 aaKnown RBP eCLIP23.6■■□□□ 1.37
H3F3B-208ENST00000589599 CPDO75976 1380 aa23.6■■□□□ 1.37
H3F3B-208ENST00000589599 NWD2Q9ULI1 1742 aa23.59■■□□□ 1.37
H3F3B-208ENST00000589599 CRYBG1Q9Y4K1 1723 aa23.59■■□□□ 1.37
H3F3B-208ENST00000589599 EVA1CP58658 441 aa23.59■■□□□ 1.37
H3F3B-208ENST00000589599 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
H3F3B-208ENST00000589599 PLCH1Q4KWH8 1693 aa23.58■■□□□ 1.37
H3F3B-208ENST00000589599 CD163L1Q9NR16 1453 aa23.58■■□□□ 1.37
H3F3B-208ENST00000589599 PHRF1Q9P1Y6 1649 aaKnown RBP23.58■■□□□ 1.36
H3F3B-208ENST00000589599 AKAP12Q02952 1782 aa23.57■■□□□ 1.36
H3F3B-208ENST00000589599 ZBTB7CA1YPR0 619 aa23.57■■□□□ 1.36
H3F3B-208ENST00000589599 A0A1W2PP64 1363 aa23.56■■□□□ 1.36
H3F3B-208ENST00000589599 STRN4Q9NRL3 753 aa23.56■■□□□ 1.36
H3F3B-208ENST00000589599 EDC4Q6P2E9 1401 aaKnown RBP23.56■■□□□ 1.36
H3F3B-208ENST00000589599 NME9Q86XW9 330 aa23.55■■□□□ 1.36
H3F3B-208ENST00000589599 NRKQ7Z2Y5 1582 aa23.54■■□□□ 1.36
H3F3B-208ENST00000589599 SOX12O15370 315 aa23.53■■□□□ 1.36
H3F3B-208ENST00000589599 ONECUT3O60422 494 aaPredicted RBP23.53■■□□□ 1.36
H3F3B-208ENST00000589599 HSPA5P11021 654 aaKnown RBP23.53■■□□□ 1.36
H3F3B-208ENST00000589599 PIK3C2AO00443 1686 aa23.53■■□□□ 1.36
H3F3B-208ENST00000589599 SPATA31A5Q5VU36 1347 aa23.53■■□□□ 1.36
H3F3B-208ENST00000589599 SPATA31A7Q8IWB4 1347 aa23.53■■□□□ 1.36
H3F3B-208ENST00000589599 SLIT3O75094 1523 aa23.53■■□□□ 1.36
H3F3B-208ENST00000589599 USP31Q70CQ4 1352 aa23.52■■□□□ 1.36
H3F3B-208ENST00000589599 SEPT12Q8IYM1 358 aa23.52■■□□□ 1.36
H3F3B-208ENST00000589599 ZRANB1Q9UGI0 708 aa23.52■■□□□ 1.36
H3F3B-208ENST00000589599 ANKRD36BQ8N2N9 1353 aa23.52■■□□□ 1.36
H3F3B-208ENST00000589599 MON2Q7Z3U7 1717 aa23.51■■□□□ 1.35
H3F3B-208ENST00000589599 A0A0G2JS52 829 aa23.51■■□□□ 1.35
H3F3B-208ENST00000589599 MYT1Q01538 1121 aa23.51■■□□□ 1.35
H3F3B-208ENST00000589599 UPF1Q92900 1129 aaKnown RBP eCLIP23.51■■□□□ 1.35
H3F3B-208ENST00000589599 GLI3P10071 1580 aa23.51■■□□□ 1.35
H3F3B-208ENST00000589599 AATKQ6ZMQ8 1374 aa23.51■■□□□ 1.35
H3F3B-208ENST00000589599 FAM98CQ17RN3 349 aaKnown RBP23.5■■□□□ 1.35
H3F3B-208ENST00000589599 ARHGEF25Q86VW2 580 aa23.49■■□□□ 1.35
H3F3B-208ENST00000589599 NRAPQ86VF7 1730 aa23.48■■□□□ 1.35
H3F3B-208ENST00000589599 SPATA31A1Q5TZJ5 1347 aa23.48■■□□□ 1.35
H3F3B-208ENST00000589599 POLR3GLQ9BT43 218 aa23.47■■□□□ 1.35
H3F3B-208ENST00000589599 CAMTA1Q9Y6Y1 1673 aa23.47■■□□□ 1.35
H3F3B-208ENST00000589599 LARP1Q6PKG0 1096 aaKnown RBP23.46■■□□□ 1.35
H3F3B-208ENST00000589599 COG3Q96JB2 828 aa23.46■■□□□ 1.35
H3F3B-208ENST00000589599 USP35Q9P2H5 1018 aa23.45■■□□□ 1.34
H3F3B-208ENST00000589599 KRT27Q7Z3Y8 459 aa23.44■■□□□ 1.34
H3F3B-208ENST00000589599 TCP11L2Q8N4U5 519 aa23.42■■□□□ 1.34
H3F3B-208ENST00000589599 AXIN2Q9Y2T1 843 aa23.42■■□□□ 1.34
H3F3B-208ENST00000589599 LMO7Q8WWI1 1683 aa23.41■■□□□ 1.34
H3F3B-208ENST00000589599 THRAP3Q9Y2W1 955 aaKnown RBP23.41■■□□□ 1.34
H3F3B-208ENST00000589599 COL5A2P05997 1499 aaPredicted RBP23.41■■□□□ 1.34
H3F3B-208ENST00000589599 NFAT5O94916 1531 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms