RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 ONECUT3O60422 494 aaPredicted RBP34.53■■■■□ 3.12
LSM7-205ENST00000589532 NBPF1Q3BBV0 1214 aa34.53■■■■□ 3.12
LSM7-205ENST00000589532 NGDNQ8NEJ9 315 aaKnown RBP34.52■■■■□ 3.12
LSM7-205ENST00000589532 CDK19Q9BWU1 502 aa34.5■■■■□ 3.11
LSM7-205ENST00000589532 CCDC125Q86Z20 511 aa34.49■■■■□ 3.11
LSM7-205ENST00000589532 SEPT12Q8IYM1 358 aa34.49■■■■□ 3.11
LSM7-205ENST00000589532 QRICH2Q9H0J4 1663 aa34.49■■■■□ 3.11
LSM7-205ENST00000589532 BLMP54132 1417 aaPredicted RBP34.47■■■■□ 3.11
LSM7-205ENST00000589532 TRPM1Q7Z4N2 1603 aa34.46■■■■□ 3.11
LSM7-205ENST00000589532 NRKQ7Z2Y5 1582 aa34.45■■■■□ 3.11
LSM7-205ENST00000589532 THSD7AQ9UPZ6 1657 aa34.45■■■■□ 3.11
LSM7-205ENST00000589532 BTG4Q9NY30 223 aa34.45■■■■□ 3.11
LSM7-205ENST00000589532 ACEP12821 1306 aa34.42■■■■□ 3.1
LSM7-205ENST00000589532 PLEKHG3A1L390 1219 aa34.42■■■■□ 3.1
LSM7-205ENST00000589532 PAK3O75914 559 aaPredicted RBP34.42■■■■□ 3.1
LSM7-205ENST00000589532 CCDC61Q9Y6R9 512 aa34.42■■■■□ 3.1
LSM7-205ENST00000589532 CENPJQ9HC77 1338 aaPredicted RBP34.4■■■■□ 3.1
LSM7-205ENST00000589532 CCDC9Q9Y3X0 531 aaKnown RBP34.4■■■■□ 3.1
LSM7-205ENST00000589532 KIAA0232Q92628 1395 aa34.38■■■■□ 3.09
LSM7-205ENST00000589532 L3MBTL2Q969R5 705 aa34.38■■■■□ 3.09
LSM7-205ENST00000589532 SPATA31A5Q5VU36 1347 aa34.36■■■■□ 3.09
LSM7-205ENST00000589532 SPATA31A7Q8IWB4 1347 aa34.36■■■■□ 3.09
LSM7-205ENST00000589532 NBPF8Q3BBV2 869 aa34.36■■■■□ 3.09
LSM7-205ENST00000589532 PPIP5K1Q6PFW1 1433 aa34.36■■■■□ 3.09
LSM7-205ENST00000589532 LMO7Q8WWI1 1683 aa34.35■■■■□ 3.09
LSM7-205ENST00000589532 KRT27Q7Z3Y8 459 aa34.35■■■■□ 3.09
LSM7-205ENST00000589532 PRDM11Q9NQV5 511 aa34.35■■■■□ 3.09
LSM7-205ENST00000589532 FAM98CQ17RN3 349 aaKnown RBP34.33■■■■□ 3.09
LSM7-205ENST00000589532 USP19O94966 1318 aa34.32■■■■□ 3.09
LSM7-205ENST00000589532 TRIM26Q12899 539 aaPredicted RBP34.31■■■■□ 3.08
LSM7-205ENST00000589532 SIN3AQ96ST3 1273 aa34.3■■■■□ 3.08
LSM7-205ENST00000589532 CPDO75976 1380 aa34.27■■■■□ 3.08
LSM7-205ENST00000589532 SRPK2P78362 688 aaKnown RBP34.27■■■■□ 3.08
LSM7-205ENST00000589532 NUTM2GQ5VZR2 741 aa34.27■■■■□ 3.08
LSM7-205ENST00000589532 CABP2Q9NPB3 220 aa34.27■■■■□ 3.08
LSM7-205ENST00000589532 ZRANB1Q9UGI0 708 aa34.27■■■■□ 3.08
LSM7-205ENST00000589532 CHRNA2Q15822 529 aa34.26■■■■□ 3.08
LSM7-205ENST00000589532 DEFB132Q7Z7B7 95 aa34.26■■■■□ 3.08
LSM7-205ENST00000589532 RGPD1P0DJD0 1748 aa34.26■■■■□ 3.07
LSM7-205ENST00000589532 CAMTA1Q9Y6Y1 1673 aa34.25■■■■□ 3.07
LSM7-205ENST00000589532 BRD4O60885 1362 aaPredicted RBP34.25■■■■□ 3.07
LSM7-205ENST00000589532 USP6P35125 1406 aa34.25■■■■□ 3.07
LSM7-205ENST00000589532 SPATA31A1Q5TZJ5 1347 aa34.25■■■■□ 3.07
LSM7-205ENST00000589532 TNS1Q9HBL0 1735 aaKnown RBP34.24■■■■□ 3.07
LSM7-205ENST00000589532 SSH2Q76I76 1423 aa34.23■■■■□ 3.07
LSM7-205ENST00000589532 PIK3C2AO00443 1686 aa34.22■■■■□ 3.07
LSM7-205ENST00000589532 SLIT3O75094 1523 aa34.22■■■■□ 3.07
LSM7-205ENST00000589532 ZC3H6P61129 1189 aaKnown RBP34.22■■■■□ 3.07
LSM7-205ENST00000589532 A0A0G2JS52 829 aa34.21■■■■□ 3.07
LSM7-205ENST00000589532 MYT1Q01538 1121 aa34.21■■■■□ 3.07
LSM7-205ENST00000589532 ABTB2Q8N961 1025 aa34.2■■■■□ 3.07
LSM7-205ENST00000589532 ROCK2O75116 1388 aaKnown RBP34.19■■■■□ 3.06
LSM7-205ENST00000589532 AKAP12Q02952 1782 aa34.18■■■■□ 3.06
LSM7-205ENST00000589532 SF3B2Q13435 895 aaKnown RBP34.16■■■■□ 3.06
LSM7-205ENST00000589532 DISP2A7MBM2 1401 aa34.15■■■■□ 3.06
LSM7-205ENST00000589532 CABP1Q9NZU7 370 aa34.15■■■■□ 3.06
LSM7-205ENST00000589532 STRN4Q9NRL3 753 aa34.14■■■■□ 3.06
LSM7-205ENST00000589532 COL5A2P05997 1499 aaPredicted RBP34.14■■■■□ 3.06
LSM7-205ENST00000589532 EVC2Q86UK5 1308 aa34.12■■■■□ 3.05
LSM7-205ENST00000589532 GCP02774 474 aa34.12■■■■□ 3.05
LSM7-205ENST00000589532 NEUROD1Q13562 356 aa34.12■■■■□ 3.05
LSM7-205ENST00000589532 FAM182BQ5T319 152 aa34.12■■■■□ 3.05
LSM7-205ENST00000589532 NLRP13Q86W25 1043 aa34.12■■■■□ 3.05
LSM7-205ENST00000589532 COL18A1P39060 1754 aa34.1■■■■□ 3.05
LSM7-205ENST00000589532 PARP4Q9UKK3 1724 aaKnown RBP34.1■■■■□ 3.05
LSM7-205ENST00000589532 SBNO2Q9Y2G9 1366 aa34.1■■■■□ 3.05
LSM7-205ENST00000589532 BARGINQ6ZT62 677 aa34.09■■■■□ 3.05
LSM7-205ENST00000589532 BAG6P46379 1132 aa34.07■■■■□ 3.04
LSM7-205ENST00000589532 LARP1Q6PKG0 1096 aaKnown RBP34.07■■■■□ 3.04
LSM7-205ENST00000589532 LRP5O75197 1615 aa34.07■■■■□ 3.04
LSM7-205ENST00000589532 MON2Q7Z3U7 1717 aa34.07■■■■□ 3.04
LSM7-205ENST00000589532 CPSF1Q10570 1443 aaKnown RBP34.05■■■■□ 3.04
LSM7-205ENST00000589532 AATKQ6ZMQ8 1374 aa34.03■■■■□ 3.04
LSM7-205ENST00000589532 WNK3Q9BYP7 1800 aa34.02■■■■□ 3.04
LSM7-205ENST00000589532 USP35Q9P2H5 1018 aa34.01■■■■□ 3.03
LSM7-205ENST00000589532 USP54Q70EL1 1684 aa34■■■■□ 3.03
LSM7-205ENST00000589532 NLRP6P59044 892 aa34■■■■□ 3.03
LSM7-205ENST00000589532 CRB1P82279 1406 aa34■■■■□ 3.03
LSM7-205ENST00000589532 EVA1CP58658 441 aa33.99■■■■□ 3.03
LSM7-205ENST00000589532 TCP11L2Q8N4U5 519 aa33.99■■■■□ 3.03
LSM7-205ENST00000589532 LRRC37A3O60309 1634 aa33.99■■■■□ 3.03
LSM7-205ENST00000589532 NFAT5O94916 1531 aa33.99■■■■□ 3.03
LSM7-205ENST00000589532 EN1Q05925 392 aaPredicted RBP33.98■■■■□ 3.03
LSM7-205ENST00000589532 RREB1Q92766 1687 aa33.98■■■■□ 3.03
LSM7-205ENST00000589532 PEAK1Q9H792 1746 aa33.98■■■■□ 3.03
LSM7-205ENST00000589532 TTC21BQ7Z4L5 1316 aa33.98■■■■□ 3.03
LSM7-205ENST00000589532 THRAP3Q9Y2W1 955 aaKnown RBP33.97■■■■□ 3.03
LSM7-205ENST00000589532 CD163L1Q9NR16 1453 aa33.96■■■■□ 3.03
LSM7-205ENST00000589532 FAM196AQ6ZSG2 479 aa33.96■■■■□ 3.03
LSM7-205ENST00000589532 ZNF692Q9BU19 519 aaPredicted RBP33.94■■■■□ 3.02
LSM7-205ENST00000589532 TTC21AQ8NDW8 1320 aa33.93■■■■□ 3.02
LSM7-205ENST00000589532 ABCC6O95255 1503 aa33.92■■■■□ 3.02
LSM7-205ENST00000589532 RGPD5Q99666 1765 aa33.9■■■■□ 3.02
LSM7-205ENST00000589532 TRIM37O94972 964 aa33.9■■■■□ 3.02
LSM7-205ENST00000589532 NUP188Q5SRE5 1749 aa33.9■■■■□ 3.02
LSM7-205ENST00000589532 KTN1Q86UP2 1357 aaKnown RBP33.89■■■■□ 3.02
LSM7-205ENST00000589532 PARD3Q8TEW0 1356 aa33.89■■■■□ 3.02
LSM7-205ENST00000589532 CARD11Q9BXL7 1154 aa33.89■■■■□ 3.02
LSM7-205ENST00000589532 TONSLQ96HA7 1378 aa33.88■■■■□ 3.01
LSM7-205ENST00000589532 CAMKK2Q96RR4 588 aa33.88■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms