RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 SETD1BQ9UPS6 1966 aaKnown RBP4.41□□□□□ -1.7
LINC01539-203ENST00000589447 MYO5BQ9ULV0 1848 aa4.41□□□□□ -1.7
LINC01539-203ENST00000589447 WASHC2CQ9Y4E1 1318 aa4.41□□□□□ -1.7
LINC01539-203ENST00000589447 ATP7AQ04656 1500 aa4.41□□□□□ -1.7
LINC01539-203ENST00000589447 BRD4O60885 1362 aaPredicted RBP4.4□□□□□ -1.7
LINC01539-203ENST00000589447 CFAP65Q6ZU64 1925 aaKnown RBP4.4□□□□□ -1.7
LINC01539-203ENST00000589447 DHX29Q7Z478 1369 aaKnown RBP4.4□□□□□ -1.7
LINC01539-203ENST00000589447 KIF15Q9NS87 1388 aa4.4□□□□□ -1.7
LINC01539-203ENST00000589447 CEP170BQ9Y4F5 1589 aaPredicted RBP4.4□□□□□ -1.7
LINC01539-203ENST00000589447 DAPK1P53355 1430 aa4.4□□□□□ -1.7
LINC01539-203ENST00000589447 TRAPPC8Q9Y2L5 1435 aa4.4□□□□□ -1.7
LINC01539-203ENST00000589447 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 NEFMP07197 916 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 RRP1P56182 461 aaKnown RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 PDE3BQ13370 1112 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 CCDC184Q52MB2 194 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 LCE2DQ5TA82 110 aaPredicted RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 KRI1Q8N9T8 703 aaKnown RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 FBXW7Q969H0 707 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 ZNF428Q96B54 188 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 CCDC97Q96F63 343 aaPredicted RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 ZFP91Q96JP5 570 aaPredicted RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 MPHOSPH9Q99550 1183 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 BCL11BQ9C0K0 894 aaPredicted RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 ARIH1Q9Y4X5 557 aaPredicted RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 STK24Q9Y6E0 443 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 ZNF518AQ6AHZ1 1483 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 RALGAPBQ86X10 1494 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 ZC3H13Q5T200 1668 aaKnown RBP4.4□□□□□ -1.71
LINC01539-203ENST00000589447 INSRP06213 1382 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 USP47Q96K76 1375 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 ANKRD30BQ9BXX2 1392 aa4.4□□□□□ -1.71
LINC01539-203ENST00000589447 LAMC1P11047 1609 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 CAMSAP1Q5T5Y3 1602 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 PLCH2O75038 1416 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 TROQ12816 1431 aaPredicted RBP4.39□□□□□ -1.71
LINC01539-203ENST00000589447 SCAPERQ9BY12 1400 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 ATP10AO60312 1499 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 MAGI2Q86UL8 1455 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 L3MBTL2Q969R5 705 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 ANO8Q9HCE9 1232 aaPredicted RBP4.39□□□□□ -1.71
LINC01539-203ENST00000589447 RRP7BPQ9NSQ0 103 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 BOLA1Q9Y3E2 137 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 AGLP35573 1532 aa4.39□□□□□ -1.71
LINC01539-203ENST00000589447 LRPPRCP42704 1394 aaKnown RBP4.39□□□□□ -1.71
LINC01539-203ENST00000589447 RNF17Q9BXT8 1623 aaKnown RBP4.39□□□□□ -1.71
LINC01539-203ENST00000589447 UHRF1BP1Q6BDS2 1440 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 PDE4AP27815 886 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 RALBP1Q15311 655 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 FAM177A1Q8N128 213 aaPredicted RBP4.38□□□□□ -1.71
LINC01539-203ENST00000589447 EFCAB3Q8N7B9 438 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 RETREG2Q8NC44 543 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 TMC1Q8TDI8 760 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 UBE2Q2Q8WVN8 375 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 CLUAP1Q96AJ1 413 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 BACH2Q9BYV9 841 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 FAM117AQ9C073 453 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 SALL2Q9Y467 1007 aaPredicted RBP4.38□□□□□ -1.71
LINC01539-203ENST00000589447 MYBBP1AQ9BQG0 1328 aaKnown RBP4.38□□□□□ -1.71
LINC01539-203ENST00000589447 EIF2AK4Q9P2K8 1649 aaKnown RBP4.38□□□□□ -1.71
LINC01539-203ENST00000589447 KIAA1107Q9UPP5 1409 aa4.38□□□□□ -1.71
LINC01539-203ENST00000589447 ADGRL2O95490 1459 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 KDM5DQ9BY66 1539 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 PLEKHG3A1L390 1219 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 NLRP6P59044 892 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 IRF5Q13568 498 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 PROSER2Q86WR7 435 aaPredicted RBP4.37□□□□□ -1.71
LINC01539-203ENST00000589447 CCDC125Q86Z20 511 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 FNBP4Q8N3X1 1017 aaPredicted RBP4.37□□□□□ -1.71
LINC01539-203ENST00000589447 LAS1LQ9Y4W2 734 aaKnown RBP4.37□□□□□ -1.71
LINC01539-203ENST00000589447 SETD1AO15047 1707 aaKnown RBP4.37□□□□□ -1.71
LINC01539-203ENST00000589447 UBR1Q8IWV7 1749 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 PZPP20742 1482 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 MLH3Q9UHC1 1453 aa4.37□□□□□ -1.71
LINC01539-203ENST00000589447 TRPM1Q7Z4N2 1603 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 KCNA1Q09470 495 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 NBPF8Q3BBV2 869 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 PNISRQ8TF01 805 aaKnown RBP4.36□□□□□ -1.71
LINC01539-203ENST00000589447 RCAN3Q9UKA8 241 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 CHIC2Q9UKJ5 165 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 ABCC5O15440 1437 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 BLMP54132 1417 aaPredicted RBP4.36□□□□□ -1.71
LINC01539-203ENST00000589447 CAMSAP2Q08AD1 1489 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 SHANK2Q9UPX8 1470 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 GPATCH8Q9UKJ3 1502 aaKnown RBP4.36□□□□□ -1.71
LINC01539-203ENST00000589447 MED1Q15648 1581 aaPredicted RBP4.36□□□□□ -1.71
LINC01539-203ENST00000589447 VWDEQ8N2E2 1590 aa4.36□□□□□ -1.71
LINC01539-203ENST00000589447 IQGAP1P46940 1657 aa4.35□□□□□ -1.71
LINC01539-203ENST00000589447 ST18O60284 1047 aa4.35□□□□□ -1.71
LINC01539-203ENST00000589447 CEBPAP49715 358 aaPredicted RBP4.35□□□□□ -1.71
LINC01539-203ENST00000589447 GPIHBP1Q8IV16 184 aa4.35□□□□□ -1.71
LINC01539-203ENST00000589447 MICALL2Q8IY33 904 aa4.35□□□□□ -1.71
LINC01539-203ENST00000589447 FAM43AQ8N2R8 423 aa4.35□□□□□ -1.71
LINC01539-203ENST00000589447 FBXO41Q8TF61 875 aa4.35□□□□□ -1.71
LINC01539-203ENST00000589447 FAM163AQ96GL9 167 aaPredicted RBP4.35□□□□□ -1.71
LINC01539-203ENST00000589447 ZNF777Q9ULD5 760 aaPredicted RBP4.35□□□□□ -1.71
LINC01539-203ENST00000589447 EIF3AQ14152 1382 aaKnown RBP4.35□□□□□ -1.71
LINC01539-203ENST00000589447 DEPDC5O75140 1603 aa4.35□□□□□ -1.71
LINC01539-203ENST00000589447 BRD1O95696 1058 aa4.34□□□□□ -1.71
LINC01539-203ENST00000589447 MLECQ14165 292 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms