RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 LMOD2Q6P5Q4 547 aa24.79■■□□□ 1.56
H3F3B-207ENST00000589417 ZNF692Q9BU19 519 aaPredicted RBP24.79■■□□□ 1.56
H3F3B-207ENST00000589417 USP47Q96K76 1375 aa24.78■■□□□ 1.56
H3F3B-207ENST00000589417 PAK3O75914 559 aaPredicted RBP24.77■■□□□ 1.56
H3F3B-207ENST00000589417 CABLES1Q8TDN4 633 aa24.77■■□□□ 1.56
H3F3B-207ENST00000589417 SSH2Q76I76 1423 aa24.76■■□□□ 1.55
H3F3B-207ENST00000589417 USP6P35125 1406 aa24.75■■□□□ 1.55
H3F3B-207ENST00000589417 USP21Q9UK80 565 aa24.74■■□□□ 1.55
H3F3B-207ENST00000589417 CPSF1Q10570 1443 aaKnown RBP24.74■■□□□ 1.55
H3F3B-207ENST00000589417 QTRT2Q9H974 415 aaKnown RBP24.73■■□□□ 1.55
H3F3B-207ENST00000589417 SLIT2O94813 1529 aa24.72■■□□□ 1.55
H3F3B-207ENST00000589417 BCL9LQ86UU0 1499 aa24.72■■□□□ 1.55
H3F3B-207ENST00000589417 RXRBP28702 533 aa24.72■■□□□ 1.55
H3F3B-207ENST00000589417 HAP1P54257 671 aaPredicted RBP24.71■■□□□ 1.55
H3F3B-207ENST00000589417 ABTB2Q8N961 1025 aa24.71■■□□□ 1.55
H3F3B-207ENST00000589417 RBM6P78332 1123 aaKnown RBP24.7■■□□□ 1.54
H3F3B-207ENST00000589417 TRPC5Q9UL62 973 aaPredicted RBP24.7■■□□□ 1.54
H3F3B-207ENST00000589417 CDK12Q9NYV4 1490 aaPredicted RBP24.69■■□□□ 1.54
H3F3B-207ENST00000589417 MARF1Q9Y4F3 1742 aaKnown RBP24.69■■□□□ 1.54
H3F3B-207ENST00000589417 ATRNO75882 1429 aa24.69■■□□□ 1.54
H3F3B-207ENST00000589417 USP19O94966 1318 aa24.68■■□□□ 1.54
H3F3B-207ENST00000589417 FAM83GA6ND36 823 aa24.68■■□□□ 1.54
H3F3B-207ENST00000589417 NLRP13Q86W25 1043 aa24.68■■□□□ 1.54
H3F3B-207ENST00000589417 UNC5CLQ8IV45 518 aa24.68■■□□□ 1.54
H3F3B-207ENST00000589417 NINLQ9Y2I6 1382 aa24.67■■□□□ 1.54
H3F3B-207ENST00000589417 TMF1P82094 1093 aa24.67■■□□□ 1.54
H3F3B-207ENST00000589417 ABCA3Q99758 1704 aa24.66■■□□□ 1.54
H3F3B-207ENST00000589417 SLC12A5Q9H2X9 1139 aa24.66■■□□□ 1.54
H3F3B-207ENST00000589417 TTC21BQ7Z4L5 1316 aa24.65■■□□□ 1.54
H3F3B-207ENST00000589417 TTC21AQ8NDW8 1320 aa24.65■■□□□ 1.54
H3F3B-207ENST00000589417 CD163L1Q9NR16 1453 aa24.65■■□□□ 1.54
H3F3B-207ENST00000589417 CRYBG1Q9Y4K1 1723 aa24.65■■□□□ 1.54
H3F3B-207ENST00000589417 CDCA8Q53HL2 280 aa24.63■■□□□ 1.53
H3F3B-207ENST00000589417 NUTM2GQ5VZR2 741 aa24.63■■□□□ 1.53
H3F3B-207ENST00000589417 KTN1Q86UP2 1357 aaKnown RBP24.63■■□□□ 1.53
H3F3B-207ENST00000589417 PLEKHG5O94827 1062 aa24.62■■□□□ 1.53
H3F3B-207ENST00000589417 TMC1Q8TDI8 760 aa24.62■■□□□ 1.53
H3F3B-207ENST00000589417 TERF2IPQ9NYB0 399 aa24.62■■□□□ 1.53
H3F3B-207ENST00000589417 HDGFL2Q7Z4V5 671 aaPredicted RBP24.61■■□□□ 1.53
H3F3B-207ENST00000589417 CPDO75976 1380 aa24.61■■□□□ 1.53
H3F3B-207ENST00000589417 GCP02774 474 aa24.6■■□□□ 1.53
H3F3B-207ENST00000589417 NLRP6P59044 892 aa24.6■■□□□ 1.53
H3F3B-207ENST00000589417 VPS72Q15906 364 aa24.6■■□□□ 1.53
H3F3B-207ENST00000589417 GJD4Q96KN9 370 aaPredicted RBP24.6■■□□□ 1.53
H3F3B-207ENST00000589417 AKAP12Q02952 1782 aa24.59■■□□□ 1.53
H3F3B-207ENST00000589417 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.59■■□□□ 1.53
H3F3B-207ENST00000589417 EIF4G2P78344 907 aaKnown RBP eCLIP24.59■■□□□ 1.53
H3F3B-207ENST00000589417 KIAA0232Q92628 1395 aa24.58■■□□□ 1.53
H3F3B-207ENST00000589417 PRDM11Q9NQV5 511 aa24.58■■□□□ 1.53
H3F3B-207ENST00000589417 A0A1W2PP64 1363 aa24.57■■□□□ 1.52
H3F3B-207ENST00000589417 USP31Q70CQ4 1352 aa24.57■■□□□ 1.52
H3F3B-207ENST00000589417 NWD2Q9ULI1 1742 aa24.57■■□□□ 1.52
H3F3B-207ENST00000589417 EDC4Q6P2E9 1401 aaKnown RBP24.56■■□□□ 1.52
H3F3B-207ENST00000589417 BTG4Q9NY30 223 aa24.56■■□□□ 1.52
H3F3B-207ENST00000589417 COL14A1Q05707 1796 aaKnown RBP24.56■■□□□ 1.52
H3F3B-207ENST00000589417 PHRF1Q9P1Y6 1649 aaKnown RBP24.56■■□□□ 1.52
H3F3B-207ENST00000589417 SLIT3O75094 1523 aa24.56■■□□□ 1.52
H3F3B-207ENST00000589417 NRKQ7Z2Y5 1582 aa24.55■■□□□ 1.52
H3F3B-207ENST00000589417 ZC3H6P61129 1189 aaKnown RBP24.55■■□□□ 1.52
H3F3B-207ENST00000589417 MON2Q7Z3U7 1717 aa24.54■■□□□ 1.52
H3F3B-207ENST00000589417 RGS12O14924 1447 aa24.53■■□□□ 1.52
H3F3B-207ENST00000589417 PIK3C2AO00443 1686 aa24.53■■□□□ 1.52
H3F3B-207ENST00000589417 ONECUT3O60422 494 aaPredicted RBP24.53■■□□□ 1.52
H3F3B-207ENST00000589417 KCNH5Q8NCM2 988 aa24.53■■□□□ 1.52
H3F3B-207ENST00000589417 ANKRD36BQ8N2N9 1353 aa24.53■■□□□ 1.52
H3F3B-207ENST00000589417 HSPA5P11021 654 aaKnown RBP24.52■■□□□ 1.52
H3F3B-207ENST00000589417 PLCH1Q4KWH8 1693 aa24.52■■□□□ 1.52
H3F3B-207ENST00000589417 CHRNA2Q15822 529 aa24.5■■□□□ 1.51
H3F3B-207ENST00000589417 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.5■■□□□ 1.51
H3F3B-207ENST00000589417 AATKQ6ZMQ8 1374 aa24.49■■□□□ 1.51
H3F3B-207ENST00000589417 ARHGEF25Q86VW2 580 aa24.48■■□□□ 1.51
H3F3B-207ENST00000589417 NME9Q86XW9 330 aa24.48■■□□□ 1.51
H3F3B-207ENST00000589417 NRAPQ86VF7 1730 aa24.47■■□□□ 1.51
H3F3B-207ENST00000589417 GLI3P10071 1580 aa24.47■■□□□ 1.51
H3F3B-207ENST00000589417 SPATA31A5Q5VU36 1347 aa24.46■■□□□ 1.51
H3F3B-207ENST00000589417 SPATA31A7Q8IWB4 1347 aa24.46■■□□□ 1.51
H3F3B-207ENST00000589417 ZRANB1Q9UGI0 708 aa24.45■■□□□ 1.5
H3F3B-207ENST00000589417 USP54Q70EL1 1684 aa24.45■■□□□ 1.5
H3F3B-207ENST00000589417 CAMTA1Q9Y6Y1 1673 aa24.44■■□□□ 1.5
H3F3B-207ENST00000589417 LMO7Q8WWI1 1683 aa24.43■■□□□ 1.5
H3F3B-207ENST00000589417 OVOS2A0A0J9YW53 1432 aa24.43■■□□□ 1.5
H3F3B-207ENST00000589417 OVOS2Q6IE36 1432 aa24.43■■□□□ 1.5
H3F3B-207ENST00000589417 NFAT5O94916 1531 aa24.42■■□□□ 1.5
H3F3B-207ENST00000589417 CCDC9Q9Y3X0 531 aaKnown RBP24.42■■□□□ 1.5
H3F3B-207ENST00000589417 SPATA31A1Q5TZJ5 1347 aa24.41■■□□□ 1.5
H3F3B-207ENST00000589417 EVA1CP58658 441 aa24.4■■□□□ 1.5
H3F3B-207ENST00000589417 CARD14Q9BXL6 1004 aa24.4■■□□□ 1.5
H3F3B-207ENST00000589417 FYB1O15117 783 aa24.39■■□□□ 1.49
H3F3B-207ENST00000589417 SEPT12Q8IYM1 358 aa24.39■■□□□ 1.49
H3F3B-207ENST00000589417 UPF1Q92900 1129 aaKnown RBP eCLIP24.38■■□□□ 1.49
H3F3B-207ENST00000589417 STRN4Q9NRL3 753 aa24.38■■□□□ 1.49
H3F3B-207ENST00000589417 AXIN2Q9Y2T1 843 aa24.38■■□□□ 1.49
H3F3B-207ENST00000589417 COL5A2P05997 1499 aaPredicted RBP24.38■■□□□ 1.49
H3F3B-207ENST00000589417 ABCC6O95255 1503 aa24.37■■□□□ 1.49
H3F3B-207ENST00000589417 LARP1Q6PKG0 1096 aaKnown RBP24.36■■□□□ 1.49
H3F3B-207ENST00000589417 BARGINQ6ZT62 677 aa24.36■■□□□ 1.49
H3F3B-207ENST00000589417 COG3Q96JB2 828 aa24.36■■□□□ 1.49
H3F3B-207ENST00000589417 THRAP3Q9Y2W1 955 aaKnown RBP24.36■■□□□ 1.49
H3F3B-207ENST00000589417 COL18A1P39060 1754 aa24.36■■□□□ 1.49
H3F3B-207ENST00000589417 C11orf95C9JLR9 678 aaPredicted RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms