RNA–Protein interactions for RNA: ENST00000589248.5

ZNF235-203, Transcript of zinc finger protein 235, humanhuman

TSL 3 BASIC

Gene ZNF235, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-203ENST00000589248 FAM83GA6ND36 823 aa18.58■□□□□ 0.56
ZNF235-203ENST00000589248 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
ZNF235-203ENST00000589248 CABP2Q9NPB3 220 aa18.58■□□□□ 0.56
ZNF235-203ENST00000589248 CCDC61Q9Y6R9 512 aa18.58■□□□□ 0.56
ZNF235-203ENST00000589248 ACEP12821 1306 aa18.57■□□□□ 0.56
ZNF235-203ENST00000589248 SRPK2P78362 688 aaKnown RBP18.57■□□□□ 0.56
ZNF235-203ENST00000589248 NBPF8Q3BBV2 869 aa18.57■□□□□ 0.56
ZNF235-203ENST00000589248 TRPM1Q7Z4N2 1603 aa18.56■□□□□ 0.56
ZNF235-203ENST00000589248 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.56■□□□□ 0.56
ZNF235-203ENST00000589248 RALGAPBQ86X10 1494 aa18.56■□□□□ 0.56
ZNF235-203ENST00000589248 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
ZNF235-203ENST00000589248 TOPAZ1Q8N9V7 1692 aa18.55■□□□□ 0.56
ZNF235-203ENST00000589248 PLEKHG3A1L390 1219 aa18.55■□□□□ 0.56
ZNF235-203ENST00000589248 POLR3AO14802 1390 aaPredicted RBP18.55■□□□□ 0.56
ZNF235-203ENST00000589248 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
ZNF235-203ENST00000589248 NUTM2GQ5VZR2 741 aa18.54■□□□□ 0.56
ZNF235-203ENST00000589248 PLCH1Q4KWH8 1693 aa18.54■□□□□ 0.56
ZNF235-203ENST00000589248 GLI3P10071 1580 aa18.53■□□□□ 0.56
ZNF235-203ENST00000589248 VPS72Q15906 364 aa18.53■□□□□ 0.56
ZNF235-203ENST00000589248 PPIP5K1Q6PFW1 1433 aa18.52■□□□□ 0.56
ZNF235-203ENST00000589248 BTG4Q9NY30 223 aa18.52■□□□□ 0.56
ZNF235-203ENST00000589248 CCDC9Q9Y3X0 531 aaKnown RBP18.52■□□□□ 0.56
ZNF235-203ENST00000589248 ATAD2Q6PL18 1390 aa18.52■□□□□ 0.55
ZNF235-203ENST00000589248 NWD2Q9ULI1 1742 aa18.5■□□□□ 0.55
ZNF235-203ENST00000589248 CRYBG1Q9Y4K1 1723 aa18.5■□□□□ 0.55
ZNF235-203ENST00000589248 CABP1Q9NZU7 370 aa18.5■□□□□ 0.55
ZNF235-203ENST00000589248 EP400Q96L91 3159 aa18.5■□□□□ 0.55
ZNF235-203ENST00000589248 TONSLQ96HA7 1378 aa18.48■□□□□ 0.55
ZNF235-203ENST00000589248 NCBP3Q53F19 620 aaKnown RBP18.48■□□□□ 0.55
ZNF235-203ENST00000589248 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
ZNF235-203ENST00000589248 PRDM11Q9NQV5 511 aa18.48■□□□□ 0.55
ZNF235-203ENST00000589248 EVC2Q86UK5 1308 aa18.48■□□□□ 0.55
ZNF235-203ENST00000589248 ZC3H6P61129 1189 aaKnown RBP18.47■□□□□ 0.55
ZNF235-203ENST00000589248 SEPT12Q8IYM1 358 aa18.47■□□□□ 0.55
ZNF235-203ENST00000589248 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
ZNF235-203ENST00000589248 KIAA0232Q92628 1395 aa18.46■□□□□ 0.55
ZNF235-203ENST00000589248 CHRNA2Q15822 529 aa18.46■□□□□ 0.55
ZNF235-203ENST00000589248 NRAPQ86VF7 1730 aa18.46■□□□□ 0.55
ZNF235-203ENST00000589248 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
ZNF235-203ENST00000589248 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
ZNF235-203ENST00000589248 ONECUT3O60422 494 aaPredicted RBP18.44■□□□□ 0.54
ZNF235-203ENST00000589248 RNF39Q9H2S5 420 aa18.44■□□□□ 0.54
ZNF235-203ENST00000589248 FAM98CQ17RN3 349 aaKnown RBP18.43■□□□□ 0.54
ZNF235-203ENST00000589248 KCNA4P22459 653 aa18.42■□□□□ 0.54
ZNF235-203ENST00000589248 BRWD3Q6RI45 1802 aa18.42■□□□□ 0.54
ZNF235-203ENST00000589248 USP6P35125 1406 aa18.41■□□□□ 0.54
ZNF235-203ENST00000589248 A0A0G2JS52 829 aa18.41■□□□□ 0.54
ZNF235-203ENST00000589248 MYT1Q01538 1121 aa18.41■□□□□ 0.54
ZNF235-203ENST00000589248 USP19O94966 1318 aa18.41■□□□□ 0.54
ZNF235-203ENST00000589248 NLRP13Q86W25 1043 aa18.4■□□□□ 0.54
ZNF235-203ENST00000589248 STRN4Q9NRL3 753 aa18.4■□□□□ 0.54
ZNF235-203ENST00000589248 SPATA31A5Q5VU36 1347 aa18.4■□□□□ 0.54
ZNF235-203ENST00000589248 SPATA31A7Q8IWB4 1347 aa18.4■□□□□ 0.54
ZNF235-203ENST00000589248 NRKQ7Z2Y5 1582 aa18.39■□□□□ 0.53
ZNF235-203ENST00000589248 GCP02774 474 aa18.39■□□□□ 0.53
ZNF235-203ENST00000589248 KRT27Q7Z3Y8 459 aa18.39■□□□□ 0.53
ZNF235-203ENST00000589248 NLRP6P59044 892 aa18.38■□□□□ 0.53
ZNF235-203ENST00000589248 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
ZNF235-203ENST00000589248 SSH2Q76I76 1423 aa18.38■□□□□ 0.53
ZNF235-203ENST00000589248 CPDO75976 1380 aa18.36■□□□□ 0.53
ZNF235-203ENST00000589248 CCDC125Q86Z20 511 aa18.36■□□□□ 0.53
ZNF235-203ENST00000589248 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
ZNF235-203ENST00000589248 SPATA31A1Q5TZJ5 1347 aa18.35■□□□□ 0.53
ZNF235-203ENST00000589248 TTC21BQ7Z4L5 1316 aa18.35■□□□□ 0.53
ZNF235-203ENST00000589248 ZBTB7CA1YPR0 619 aa18.35■□□□□ 0.53
ZNF235-203ENST00000589248 EVA1CP58658 441 aa18.35■□□□□ 0.53
ZNF235-203ENST00000589248 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
ZNF235-203ENST00000589248 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
ZNF235-203ENST00000589248 USP35Q9P2H5 1018 aa18.34■□□□□ 0.53
ZNF235-203ENST00000589248 BLMP54132 1417 aaPredicted RBP18.33■□□□□ 0.53
ZNF235-203ENST00000589248 FAM182BQ5T319 152 aa18.33■□□□□ 0.52
ZNF235-203ENST00000589248 LARP1Q6PKG0 1096 aaKnown RBP18.33■□□□□ 0.52
ZNF235-203ENST00000589248 PIK3C2AO00443 1686 aa18.33■□□□□ 0.52
ZNF235-203ENST00000589248 CPSF1Q10570 1443 aaKnown RBP18.32■□□□□ 0.52
ZNF235-203ENST00000589248 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
ZNF235-203ENST00000589248 LMO7Q8WWI1 1683 aa18.31■□□□□ 0.52
ZNF235-203ENST00000589248 KTN1Q86UP2 1357 aaKnown RBP18.31■□□□□ 0.52
ZNF235-203ENST00000589248 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
ZNF235-203ENST00000589248 DEFB132Q7Z7B7 95 aa18.31■□□□□ 0.52
ZNF235-203ENST00000589248 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
ZNF235-203ENST00000589248 SLIT3O75094 1523 aa18.31■□□□□ 0.52
ZNF235-203ENST00000589248 ST20-MTHFSA0A0A6YYL1 179 aa18.3■□□□□ 0.52
ZNF235-203ENST00000589248 SOX12O15370 315 aa18.3■□□□□ 0.52
ZNF235-203ENST00000589248 PCGF6Q9BYE7 350 aa18.3■□□□□ 0.52
ZNF235-203ENST00000589248 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
ZNF235-203ENST00000589248 THSD7AQ9UPZ6 1657 aa18.3■□□□□ 0.52
ZNF235-203ENST00000589248 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
ZNF235-203ENST00000589248 SLC12A5Q9H2X9 1139 aa18.29■□□□□ 0.52
ZNF235-203ENST00000589248 ZRANB1Q9UGI0 708 aa18.29■□□□□ 0.52
ZNF235-203ENST00000589248 TTC21AQ8NDW8 1320 aa18.28■□□□□ 0.52
ZNF235-203ENST00000589248 CD163L1Q9NR16 1453 aa18.28■□□□□ 0.52
ZNF235-203ENST00000589248 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.28■□□□□ 0.526e-7■■■■□ 24.3
ZNF235-203ENST00000589248 TESK2Q96S53 571 aa18.28■□□□□ 0.52
ZNF235-203ENST00000589248 COL5A2P05997 1499 aaPredicted RBP18.27■□□□□ 0.52
ZNF235-203ENST00000589248 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
ZNF235-203ENST00000589248 SRCAPQ6ZRS2 3230 aa18.26■□□□□ 0.51
ZNF235-203ENST00000589248 BARGINQ6ZT62 677 aa18.26■□□□□ 0.51
ZNF235-203ENST00000589248 TCP11L2Q8N4U5 519 aa18.26■□□□□ 0.51
ZNF235-203ENST00000589248 AXIN2Q9Y2T1 843 aa18.26■□□□□ 0.51
ZNF235-203ENST00000589248 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms