RNA–Protein interactions for RNA: ENST00000589223.5

AP3D1-206, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 2

Gene AP3D1, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-206ENST00000589223 NOB1Q9ULX3 412 aaKnown RBP15.4■□□□□ 0.06
AP3D1-206ENST00000589223 PDZRN3Q9UPQ7 1066 aa15.4■□□□□ 0.06
AP3D1-206ENST00000589223 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
AP3D1-206ENST00000589223 GLI2P10070 1586 aa15.4■□□□□ 0.06
AP3D1-206ENST00000589223 MS4A1P11836 297 aa15.39■□□□□ 0.05
AP3D1-206ENST00000589223 NEXMIFQ5QGS0 1516 aa15.39■□□□□ 0.05
AP3D1-206ENST00000589223 SLC52A1Q9NWF4 448 aa15.39■□□□□ 0.05
AP3D1-206ENST00000589223 TSPYL6Q8N831 410 aa15.39■□□□□ 0.05
AP3D1-206ENST00000589223 PIK3C2BO00750 1634 aa15.39■□□□□ 0.05
AP3D1-206ENST00000589223 DIAPH1O60610 1272 aaKnown RBP15.38■□□□□ 0.05
AP3D1-206ENST00000589223 APBB1O00213 710 aa15.38■□□□□ 0.05
AP3D1-206ENST00000589223 TRIM27P14373 513 aa15.38■□□□□ 0.05
AP3D1-206ENST00000589223 HDGFL2Q7Z4V5 671 aaPredicted RBP15.37■□□□□ 0.05
AP3D1-206ENST00000589223 TERF2IPQ9NYB0 399 aa15.37■□□□□ 0.05
AP3D1-206ENST00000589223 ANKRD36BQ8N2N9 1353 aa15.37■□□□□ 0.05
AP3D1-206ENST00000589223 RPGRIP1LQ68CZ1 1315 aa15.37■□□□□ 0.05
AP3D1-206ENST00000589223 CFAP74Q9C0B2 1584 aa15.36■□□□□ 0.05
AP3D1-206ENST00000589223 FRAT2O75474 233 aaPredicted RBP15.36■□□□□ 0.05
AP3D1-206ENST00000589223 PMFBP1Q8TBY8 1022 aa15.36■□□□□ 0.05
AP3D1-206ENST00000589223 ATAD2Q6PL18 1390 aa15.36■□□□□ 0.05
AP3D1-206ENST00000589223 AEBP1Q8IUX7 1158 aa15.36■□□□□ 0.05
AP3D1-206ENST00000589223 MIS18AQ9NYP9 233 aa15.36■□□□□ 0.05
AP3D1-206ENST00000589223 SLC24A1O60721 1099 aa15.36■□□□□ 0.05
AP3D1-206ENST00000589223 TMEM57Q8N5G2 664 aa15.36■□□□□ 0.05
AP3D1-206ENST00000589223 NPC1L1Q9UHC9 1359 aa15.35■□□□□ 0.05
AP3D1-206ENST00000589223 POLKQ9UBT6 870 aa15.35■□□□□ 0.05
AP3D1-206ENST00000589223 MFAP1P55081 439 aaKnown RBP15.34■□□□□ 0.05
AP3D1-206ENST00000589223 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
AP3D1-206ENST00000589223 KIAA1210Q9ULL0 1709 aa15.34■□□□□ 0.05
AP3D1-206ENST00000589223 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
AP3D1-206ENST00000589223 LNPKQ9C0E8 428 aa15.34■□□□□ 0.05
AP3D1-206ENST00000589223 NFKBIBQ15653 356 aa15.33■□□□□ 0.05
AP3D1-206ENST00000589223 ZNF428Q96B54 188 aa15.33■□□□□ 0.05
AP3D1-206ENST00000589223 PLEKHF1Q96S99 279 aa15.33■□□□□ 0.05
AP3D1-206ENST00000589223 ZBTB7CA1YPR0 619 aa15.33■□□□□ 0.04
AP3D1-206ENST00000589223 MYH16Q9H6N6 1097 aa15.33■□□□□ 0.04
AP3D1-206ENST00000589223 METP08581 1390 aa15.32■□□□□ 0.04
AP3D1-206ENST00000589223 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
AP3D1-206ENST00000589223 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
AP3D1-206ENST00000589223 PDE3AQ14432 1141 aa15.31■□□□□ 0.04
AP3D1-206ENST00000589223 DIP2BQ9P265 1576 aa15.31■□□□□ 0.04
AP3D1-206ENST00000589223 SBNO2Q9Y2G9 1366 aa15.3■□□□□ 0.04
AP3D1-206ENST00000589223 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
AP3D1-206ENST00000589223 ARHGEF28Q8N1W1 1705 aaKnown RBP15.3■□□□□ 0.04
AP3D1-206ENST00000589223 CLTCQ00610 1675 aaKnown RBP15.3■□□□□ 0.04
AP3D1-206ENST00000589223 PREX1Q8TCU6 1659 aa15.3■□□□□ 0.04
AP3D1-206ENST00000589223 MVPQ14764 893 aaKnown RBP15.3■□□□□ 0.04
AP3D1-206ENST00000589223 PKNOX2Q96KN3 472 aa15.3■□□□□ 0.04
AP3D1-206ENST00000589223 SHPRHQ149N8 1683 aa15.29■□□□□ 0.04
AP3D1-206ENST00000589223 USP19O94966 1318 aa15.29■□□□□ 0.04
AP3D1-206ENST00000589223 MCM10Q7L590 875 aa15.29■□□□□ 0.04
AP3D1-206ENST00000589223 WDR63Q8IWG1 891 aa15.29■□□□□ 0.04
AP3D1-206ENST00000589223 NUDT16Q96DE0 195 aaKnown RBP15.29■□□□□ 0.04
AP3D1-206ENST00000589223 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
AP3D1-206ENST00000589223 LTV1Q96GA3 475 aaPredicted RBP15.28■□□□□ 0.04
AP3D1-206ENST00000589223 TMEM131LA2VDJ0 1609 aa15.28■□□□□ 0.04
AP3D1-206ENST00000589223 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
AP3D1-206ENST00000589223 PTPRMP28827 1452 aa15.28■□□□□ 0.04
AP3D1-206ENST00000589223 SETBP1Q9Y6X0 1596 aa15.28■□□□□ 0.04
AP3D1-206ENST00000589223 FOXO3O43524 673 aa15.27■□□□□ 0.04
AP3D1-206ENST00000589223 ZMYM3Q14202 1370 aa15.27■□□□□ 0.03
AP3D1-206ENST00000589223 ABCC11Q96J66 1382 aa15.27■□□□□ 0.03
AP3D1-206ENST00000589223 PHF23Q9BUL5 403 aaPredicted RBP15.27■□□□□ 0.03
AP3D1-206ENST00000589223 RIMS2Q9UQ26 1411 aa15.26■□□□□ 0.03
AP3D1-206ENST00000589223 C8orf58Q8NAV2 365 aa15.26■□□□□ 0.03
AP3D1-206ENST00000589223 ZC3H13Q5T200 1668 aaKnown RBP15.26■□□□□ 0.03
AP3D1-206ENST00000589223 LTKP29376 864 aa15.25■□□□□ 0.03
AP3D1-206ENST00000589223 HSP90AB2PQ58FF8 381 aa15.25■□□□□ 0.03
AP3D1-206ENST00000589223 ATF7IPQ6VMQ6 1270 aa15.25■□□□□ 0.03
AP3D1-206ENST00000589223 CD163L1Q9NR16 1453 aa15.25■□□□□ 0.03
AP3D1-206ENST00000589223 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
AP3D1-206ENST00000589223 MYO3AQ8NEV4 1616 aa15.25■□□□□ 0.03
AP3D1-206ENST00000589223 ALKQ9UM73 1620 aa15.25■□□□□ 0.03
AP3D1-206ENST00000589223 ARHGAP31Q2M1Z3 1444 aa15.24■□□□□ 0.03
AP3D1-206ENST00000589223 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
AP3D1-206ENST00000589223 RSPH6AQ9H0K4 717 aa15.24■□□□□ 0.03
AP3D1-206ENST00000589223 PRR36Q9H6K5 1346 aa15.24■□□□□ 0.03
AP3D1-206ENST00000589223 DDRGK1Q96HY6 314 aa15.24■□□□□ 0.03
AP3D1-206ENST00000589223 GZF1Q9H116 711 aaPredicted RBP15.24■□□□□ 0.03
AP3D1-206ENST00000589223 IQSEC2Q5JU85 1478 aa15.23■□□□□ 0.03
AP3D1-206ENST00000589223 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
AP3D1-206ENST00000589223 MBIPQ9NS73 344 aa15.23■□□□□ 0.03
AP3D1-206ENST00000589223 A2ML1A8K2U0 1454 aa15.23■□□□□ 0.03
AP3D1-206ENST00000589223 COG3Q96JB2 828 aa15.22■□□□□ 0.03
AP3D1-206ENST00000589223 ANKRD45Q5TZF3 282 aa15.22■□□□□ 0.03
AP3D1-206ENST00000589223 PPIP5K1Q6PFW1 1433 aa15.22■□□□□ 0.03
AP3D1-206ENST00000589223 NEURL4Q96JN8 1562 aa15.22■□□□□ 0.03
AP3D1-206ENST00000589223 USHBP1Q8N6Y0 703 aa15.19■□□□□ 0.02
AP3D1-206ENST00000589223 SLC4A10Q6U841 1118 aa15.18■□□□□ 0.02
AP3D1-206ENST00000589223 C16orf71Q8IYS4 520 aaPredicted RBP15.18■□□□□ 0.02
AP3D1-206ENST00000589223 XPCQ01831 940 aaPredicted RBP15.18■□□□□ 0.02
AP3D1-206ENST00000589223 TWISTNBQ3B726 338 aaPredicted RBP15.18■□□□□ 0.02
AP3D1-206ENST00000589223 IL13P35225 146 aa15.18■□□□□ 0.02
AP3D1-206ENST00000589223 F6X3S4 739 aa15.17■□□□□ 0.02
AP3D1-206ENST00000589223 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
AP3D1-206ENST00000589223 CCDC61Q9Y6R9 512 aa15.17■□□□□ 0.02
AP3D1-206ENST00000589223 ACEP12821 1306 aa15.17■□□□□ 0.02
AP3D1-206ENST00000589223 SMARCA5O60264 1052 aaPredicted RBP15.17■□□□□ 0.02
AP3D1-206ENST00000589223 NFE2L2Q16236 605 aa15.17■□□□□ 0.02
AP3D1-206ENST00000589223 CCDC27Q2M243 656 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms